prot_H-elongata_contig123511.1776.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig123511.1776.1
Unique Nameprot_H-elongata_contig123511.1776.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length110
Homology
[Close]
BLAST of mRNA_H-elongata_contig123511.1776.1 vs. uniprot
Match: A0A0A6YYV8_DICDH (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=A0A0A6YYV8_DICDH)

HSP 1 Score: 202 bits (515), Expect = 8.380e-63
Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = 0 
Query:    1 EGGAKKVVISAPSNDAPMLVMGVNEEKYTPDMDIVSNASCTTNCLAPVAKVINDKFGLTEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKV 108
            +GGAKKVVISAPS DAPM VMGVNEEKYTPDM +VSNASCTTNCLAP+AKVIND FGLTEGLMTTVHAVTATQKTVDGPSKKDWRGGR AG+NIIPSSTGAAKAVGKV
Sbjct:  110 KGGAKKVVISAPSADAPMFVMGVNEEKYTPDMHVVSNASCTTNCLAPIAKVINDSFGLTEGLMTTVHAVTATQKTVDGPSKKDWRGGRAAGYNIIPSSTGAAKAVGKV 217
[Close]
BLAST of mRNA_H-elongata_contig123511.1776.1 vs. uniprot
Match: Q9FVP0_ASCNO (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=Q9FVP0_ASCNO)

HSP 1 Score: 202 bits (515), Expect = 8.620e-63
Identity = 98/108 (90.74%), Postives = 103/108 (95.37%), Query Frame = 0 
Query:    1 EGGAKKVVISAPSNDAPMLVMGVNEEKYTPDMDIVSNASCTTNCLAPVAKVINDKFGLTEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKV 108
            +GGAKKVVISAPS DAPM VMGVN++KYTPDMD+VSNASCTTNCLAP+AKVIND FGL EGLMTTVHAVTATQKTVDGPSKKDWRGGR AGFNIIPSSTGAAKAVGKV
Sbjct:  111 KGGAKKVVISAPSQDAPMFVMGVNQDKYTPDMDVVSNASCTTNCLAPIAKVINDSFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRAAGFNIIPSSTGAAKAVGKV 218
[Close]
BLAST of mRNA_H-elongata_contig123511.1776.1 vs. uniprot
Match: D7FZL5_ECTSI (Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZL5_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 2.170e-61
Identity = 97/108 (89.81%), Postives = 101/108 (93.52%), Query Frame = 0 
Query:    1 EGGAKKVVISAPSNDAPMLVMGVNEEKYTPDMDIVSNASCTTNCLAPVAKVINDKFGLTEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKV 108
            +GGAKKVVISAPS DAPM VMGVN +KYTPDMD+VSNASCTTNCLAP+AKVIND FGL EGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPS TGAAKAVG V
Sbjct:  112 KGGAKKVVISAPSGDAPMFVMGVNHDKYTPDMDVVSNASCTTNCLAPMAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSGTGAAKAVGVV 219
[Close]
BLAST of mRNA_H-elongata_contig123511.1776.1 vs. uniprot
Match: A0A2L0CXU9_9COLE (Glyceraldehyde 3 phosphate dehydrogenase (Fragment) n=1 Tax=Oocyclus sp. INB014 TaxID=2055475 RepID=A0A2L0CXU9_9COLE)

HSP 1 Score: 194 bits (493), Expect = 3.580e-61
Identity = 94/108 (87.04%), Postives = 101/108 (93.52%), Query Frame = 0 
Query:    1 EGGAKKVVISAPSNDAPMLVMGVNEEKYTPDMDIVSNASCTTNCLAPVAKVINDKFGLTEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKV 108
            +GGAKKVVISAPS DAPM VMGVN++KYT DM++VSNASCTTNCLAP+AKVIND FG+ EGLMTTVHA TATQKTVDGPSKKDWRGGRGA FNIIPSSTGAAKAVGKV
Sbjct:   13 KGGAKKVVISAPSADAPMFVMGVNQDKYTKDMNVVSNASCTTNCLAPLAKVINDNFGIVEGLMTTVHATTATQKTVDGPSKKDWRGGRGAAFNIIPSSTGAAKAVGKV 120
[Close]
BLAST of mRNA_H-elongata_contig123511.1776.1 vs. uniprot
Match: Q1EMT2_9BRYO (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=8 Tax=Sphagnum TaxID=13804 RepID=Q1EMT2_9BRYO)

HSP 1 Score: 191 bits (484), Expect = 1.580e-60
Identity = 93/107 (86.92%), Postives = 98/107 (91.59%), Query Frame = 0 
Query:    2 GGAKKVVISAPSNDAPMLVMGVNEEKYTPDMDIVSNASCTTNCLAPVAKVINDKFGLTEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKV 108
            GGAKKVVISAPS D PM VMGVNE+KYT D+DIVSNASCTTNCLAP+AKVINDKFG+ EGLMTTVH+ TATQKTVDGPS KDWRGGR AG NIIPSSTGAAKAVGKV
Sbjct:    1 GGAKKVVISAPSKDVPMFVMGVNEDKYTADLDIVSNASCTTNCLAPLAKVINDKFGIIEGLMTTVHSTTATQKTVDGPSHKDWRGGRAAGVNIIPSSTGAAKAVGKV 107
[Close]
BLAST of mRNA_H-elongata_contig123511.1776.1 vs. uniprot
Match: A0A7X8GAT5_9CLOT (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X8GAT5_9CLOT)

HSP 1 Score: 196 bits (499), Expect = 2.430e-60
Identity = 94/108 (87.04%), Postives = 103/108 (95.37%), Query Frame = 0 
Query:    1 EGGAKKVVISAPSNDAPMLVMGVNEEKYTPDMDIVSNASCTTNCLAPVAKVINDKFGLTEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKV 108
            +GGAKKVVI+APS+DAPM VMGVN++KYT DM +VSNASCTTNCLAP+AKV+NDKFG+ EGLMTTVHAVTATQKTVDGPSKKDWRGGRGA FNIIPSSTGAAKAVGKV
Sbjct:  112 KGGAKKVVITAPSSDAPMFVMGVNQDKYTKDMKVVSNASCTTNCLAPIAKVLNDKFGIIEGLMTTVHAVTATQKTVDGPSKKDWRGGRGASFNIIPSSTGAAKAVGKV 219
[Close]
BLAST of mRNA_H-elongata_contig123511.1776.1 vs. uniprot
Match: F8UC97_9LILI (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=9 Tax=Halodule beaudettei TaxID=55314 RepID=F8UC97_9LILI)

HSP 1 Score: 192 bits (487), Expect = 2.580e-60
Identity = 94/108 (87.04%), Postives = 101/108 (93.52%), Query Frame = 0 
Query:    1 EGGAKKVVISAPSNDAPMLVMGVNEEKYTPDMDIVSNASCTTNCLAPVAKVINDKFGLTEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKV 108
            +GGAKKVVISAPS DAPM VMGVNE++Y  D+DIVSNASCTTNCLAP+AKVI+DKFG+ EGLMTTVHAVTATQKTVDGPS KDWRGGR AGFNIIPSSTGAAKAVGKV
Sbjct:   15 KGGAKKVVISAPSKDAPMFVMGVNEDQYKSDIDIVSNASCTTNCLAPLAKVIHDKFGILEGLMTTVHAVTATQKTVDGPSMKDWRGGRAAGFNIIPSSTGAAKAVGKV 122
[Close]
BLAST of mRNA_H-elongata_contig123511.1776.1 vs. uniprot
Match: D7FP79_ECTSI (Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP79_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 4.180e-60
Identity = 100/107 (93.46%), Postives = 101/107 (94.39%), Query Frame = 0 
Query:    2 GGAKKVVISAPSNDAPMLVMGVNEEKYTPDMDIVSNASCTTNCLAPVAKVINDKFGLTEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKV 108
            GGAKKVVISAPS DAPM VMGVN EKYTPDM +VSNASCTTNCLAPVAKVIND FGL EGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKV
Sbjct:  365 GGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKV 471
[Close]
BLAST of mRNA_H-elongata_contig123511.1776.1 vs. uniprot
Match: Q703F2_LINUS (Glyceraldehyde 3-phosphate dehydrogenase (Fragment) n=2 Tax=rosids TaxID=71275 RepID=Q703F2_LINUS)

HSP 1 Score: 191 bits (484), Expect = 5.200e-60
Identity = 91/108 (84.26%), Postives = 101/108 (93.52%), Query Frame = 0 
Query:    1 EGGAKKVVISAPSNDAPMLVMGVNEEKYTPDMDIVSNASCTTNCLAPVAKVINDKFGLTEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKV 108
            +GGAKKVVISAPS DAPM V+GVNE++Y P++DIVSNASCTTNCLAP+AKVIND+FG+ EGLMTTVHA+TATQKTVDGPS KDWRGGR A FNIIPSSTGAAKAVGKV
Sbjct:    1 KGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSNKDWRGGRAASFNIIPSSTGAAKAVGKV 108
[Close]
BLAST of mRNA_H-elongata_contig123511.1776.1 vs. uniprot
Match: Q8VXM5_CHAVU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=2 Tax=Chara TaxID=13778 RepID=Q8VXM5_CHAVU)

HSP 1 Score: 194 bits (494), Expect = 6.690e-60
Identity = 93/108 (86.11%), Postives = 102/108 (94.44%), Query Frame = 0 
Query:    1 EGGAKKVVISAPSNDAPMLVMGVNEEKYTPDMDIVSNASCTTNCLAPVAKVINDKFGLTEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKV 108
            +GGAKKV+ISAPS DAPM V+GVNE+KYTPD+ IVSNASCTTNCLAP+AKVIND FG+ EGLMTTVH++TATQKTVDGPS KDWRGGRGAGFNIIPSSTGAAKAVGKV
Sbjct:  105 KGGAKKVIISAPSKDAPMFVVGVNEDKYTPDLTIVSNASCTTNCLAPLAKVINDNFGIVEGLMTTVHSLTATQKTVDGPSGKDWRGGRGAGFNIIPSSTGAAKAVGKV 212
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig123511.1776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A6YYV8_DICDH8.380e-6391.67Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=D... [more]
Q9FVP0_ASCNO8.620e-6390.74Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=A... [more]
D7FZL5_ECTSI2.170e-6189.81Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=E... [more]
A0A2L0CXU9_9COLE3.580e-6187.04Glyceraldehyde 3 phosphate dehydrogenase (Fragment... [more]
Q1EMT2_9BRYO1.580e-6086.92Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
A0A7X8GAT5_9CLOT2.430e-6087.04Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=C... [more]
F8UC97_9LILI2.580e-6087.04Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
D7FP79_ECTSI4.180e-6093.46Triosephosphate isomerase/glyceraldehyde-3-phospha... [more]
Q703F2_LINUS5.200e-6084.26Glyceraldehyde 3-phosphate dehydrogenase (Fragment... [more]
Q8VXM5_CHAVU6.690e-6086.11Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020831Glyceraldehyde/Erythrose phosphate dehydrogenase familyPRINTSPR00078G3PDHDRGNASEcoord: 61..77
score: 78.22
coord: 34..52
score: 83.88
IPR020831Glyceraldehyde/Erythrose phosphate dehydrogenase familyPANTHERPTHR10836GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASEcoord: 2..108
NoneNo IPR availableGENE3D3.30.360.10coord: 38..109
e-value: 3.1E-36
score: 126.7
NoneNo IPR availableSUPERFAMILY55347Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domaincoord: 39..108
IPR020829Glyceraldehyde 3-phosphate dehydrogenase, catalytic domainPFAMPF02800Gp_dh_Ccoord: 45..108
e-value: 1.8E-27
score: 95.9
IPR020830Glyceraldehyde 3-phosphate dehydrogenase, active sitePROSITEPS00071GAPDHcoord: 38..45
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig123511contigH-elongata_contig123511:142..1237 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig123511.1776.1mRNA_H-elongata_contig123511.1776.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig123511 142..1237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig123511.1776.1 ID=prot_H-elongata_contig123511.1776.1|Name=mRNA_H-elongata_contig123511.1776.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
EGGAKKVVISAPSNDAPMLVMGVNEEKYTPDMDIVSNASCTTNCLAPVAK
VINDKFGLTEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTG
AAKAVGKVS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020831GlycerAld/Erythrose_P_DH
IPR020829GlycerAld_3-P_DH_cat
IPR020830GlycerAld_3-P_DH_AS
IPR036291NAD(P)-bd_dom_sf