prot_H-elongata_contig123445.1772.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig123445.1772.1
Unique Nameprot_H-elongata_contig123445.1772.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
BLAST of mRNA_H-elongata_contig123445.1772.1 vs. uniprot
Match: D8LCK6_ECTSI (Protein transport protein SEC23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCK6_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.680e-20
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 LYQTLSLLPEEALVGLLTFGTNVMVHELGFTECPKSYVFRGSKEYAAVKV 50
            L QTLSLLPEEALVGL+TFGTNVMVHELGF +CPKSYVFRG+KEY AVKV
Sbjct:  149 LQQTLSLLPEEALVGLITFGTNVMVHELGFADCPKSYVFRGAKEYTAVKV 198          
BLAST of mRNA_H-elongata_contig123445.1772.1 vs. uniprot
Match: A0A835YT42_9STRA (Protein transport protein SEC23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT42_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.460e-18
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    1 LYQTLSLLPEEALVGLLTFGTNVMVHELGFTECPKSYVFRGSKEYAAVKV 50
            L QTL+LLPE+ LVGL+TFGTNVMVHELGF++CPKSYVFRG KEY A KV
Sbjct:  155 LQQTLNLLPEDTLVGLVTFGTNVMVHELGFSDCPKSYVFRGDKEYPAAKV 204          
BLAST of mRNA_H-elongata_contig123445.1772.1 vs. uniprot
Match: A0A6U3YQE8_9STRA (Protein transport protein SEC23 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YQE8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.980e-17
Identity = 37/50 (74.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 LYQTLSLLPEEALVGLLTFGTNVMVHELGFTECPKSYVFRGSKEYAAVKV 50
            L QTL+L+PE ALVGL+TFGT+VMVH+LGFT+CPK+YVFRG+KEY+A +V
Sbjct:  163 LQQTLNLIPENALVGLITFGTHVMVHDLGFTDCPKAYVFRGTKEYSAQRV 212          
BLAST of mRNA_H-elongata_contig123445.1772.1 vs. uniprot
Match: A0A7S2W7G0_9STRA (Protein transport protein SEC23 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7G0_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 5.560e-17
Identity = 37/50 (74.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:    1 LYQTLSLLPEEALVGLLTFGTNVMVHELGFTECPKSYVFRGSKEYAAVKV 50
            L QTL+L+P+++LVGL+TFGT+VMVHELGFTECPKSYVFRG+KEY   +V
Sbjct:  152 LQQTLNLIPDDSLVGLITFGTHVMVHELGFTECPKSYVFRGTKEYPPQRV 201          
BLAST of mRNA_H-elongata_contig123445.1772.1 vs. uniprot
Match: A0A7S2Y1K9_9STRA (Protein transport protein SEC23 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1K9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 6.180e-17
Identity = 36/50 (72.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:    1 LYQTLSLLPEEALVGLLTFGTNVMVHELGFTECPKSYVFRGSKEYAAVKV 50
            L Q L+LLPE ALVGL+TFG+NVMVHE+GFT+CPKS+VFRG+KEY+   V
Sbjct:  150 LQQLLNLLPENALVGLITFGSNVMVHEIGFTDCPKSFVFRGNKEYSTAMV 199          
BLAST of mRNA_H-elongata_contig123445.1772.1 vs. uniprot
Match: A0A8H7X8C3_9HELO (Protein transport protein SEC23 n=1 Tax=Cadophora sp. M221 TaxID=2774352 RepID=A0A8H7X8C3_9HELO)

HSP 1 Score: 79.0 bits (193), Expect = 6.740e-16
Identity = 37/50 (74.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:    1 LYQTLSLLPEEALVGLLTFGTNVMVHELGFTECPKSYVFRGSKEYAAVKV 50
            L  +LSLLPE ALVGL+TFGT V VHE+G+TECPKSYVFRGSK+Y+A +V
Sbjct:  152 LVMSLSLLPENALVGLVTFGTMVQVHEIGYTECPKSYVFRGSKDYSAKQV 201          
BLAST of mRNA_H-elongata_contig123445.1772.1 vs. uniprot
Match: A0A553I173_9PEZI (Protein transport protein SEC23 n=3 Tax=Xylariales TaxID=37989 RepID=A0A553I173_9PEZI)

HSP 1 Score: 78.6 bits (192), Expect = 9.210e-16
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:    1 LYQTLSLLPEEALVGLLTFGTNVMVHELGFTECPKSYVFRGSKEYAAVKV 50
            L  +LSLLPE ALVGL+TFGT V VHE+G+TEC KSYVFRGSKEYAA +V
Sbjct:  152 LIMSLSLLPENALVGLITFGTMVQVHEIGYTECAKSYVFRGSKEYAAKQV 201          
BLAST of mRNA_H-elongata_contig123445.1772.1 vs. uniprot
Match: A0A439D501_9PEZI (Protein transport protein SEC23 n=2 Tax=Fungi TaxID=4751 RepID=A0A439D501_9PEZI)

HSP 1 Score: 78.6 bits (192), Expect = 9.210e-16
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:    1 LYQTLSLLPEEALVGLLTFGTNVMVHELGFTECPKSYVFRGSKEYAAVKV 50
            L  +LSLLPE ALVGL+TFGT V VHE+G+TEC KSYVFRGSKEYAA +V
Sbjct: 1314 LVMSLSLLPENALVGLITFGTMVQVHEIGYTECAKSYVFRGSKEYAAKQV 1363          
BLAST of mRNA_H-elongata_contig123445.1772.1 vs. uniprot
Match: A0A7S0WGD3_9CHLO (Protein transport protein SEC23 (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WGD3_9CHLO)

HSP 1 Score: 75.5 bits (184), Expect = 1.120e-15
Identity = 34/48 (70.83%), Postives = 42/48 (87.50%), Query Frame = 0
Query:    3 QTLSLLPEEALVGLLTFGTNVMVHELGFTECPKSYVFRGSKEYAAVKV 50
            Q LSLLPE+A VGL+TFGT+V VHELGFT+CPKSYVFRG+KE+   ++
Sbjct:  127 QALSLLPEDASVGLVTFGTHVHVHELGFTDCPKSYVFRGNKEFTTQQI 174          
BLAST of mRNA_H-elongata_contig123445.1772.1 vs. uniprot
Match: S3D564_GLAL2 (Protein transport protein SEC23 n=1 Tax=Glarea lozoyensis (strain ATCC 20868 / MF5171) TaxID=1116229 RepID=S3D564_GLAL2)

HSP 1 Score: 78.2 bits (191), Expect = 1.260e-15
Identity = 37/50 (74.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    1 LYQTLSLLPEEALVGLLTFGTNVMVHELGFTECPKSYVFRGSKEYAAVKV 50
            L  +LSLLPE ALVGL+TFGT   VHE+G+TECPKSYVFRGSKEY A +V
Sbjct:  134 LVMSLSLLPENALVGLVTFGTMAQVHEIGYTECPKSYVFRGSKEYTAKQV 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig123445.1772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCK6_ECTSI1.680e-2088.00Protein transport protein SEC23 n=2 Tax=Ectocarpus... [more]
A0A835YT42_9STRA2.460e-1880.00Protein transport protein SEC23 n=1 Tax=Tribonema ... [more]
A0A6U3YQE8_9STRA2.980e-1774.00Protein transport protein SEC23 n=1 Tax=Dictyocha ... [more]
A0A7S2W7G0_9STRA5.560e-1774.00Protein transport protein SEC23 n=1 Tax=Rhizochrom... [more]
A0A7S2Y1K9_9STRA6.180e-1772.00Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A8H7X8C3_9HELO6.740e-1674.00Protein transport protein SEC23 n=1 Tax=Cadophora ... [more]
A0A553I173_9PEZI9.210e-1676.00Protein transport protein SEC23 n=3 Tax=Xylariales... [more]
A0A439D501_9PEZI9.210e-1676.00Protein transport protein SEC23 n=2 Tax=Fungi TaxI... [more]
A0A7S0WGD3_9CHLO1.120e-1570.83Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
S3D564_GLAL21.260e-1574.00Protein transport protein SEC23 n=1 Tax=Glarea loz... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006896Sec23/Sec24, trunk domainPFAMPF04811Sec23_trunkcoord: 1..47
e-value: 4.5E-6
score: 26.4
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410coord: 1..50
e-value: 1.1E-18
score: 69.4
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 1..48
IPR037364Protein transport protein Sec23PANTHERPTHR11141PROTEIN TRANSPORT PROTEIN SEC23coord: 1..48
NoneNo IPR availablePANTHERPTHR11141:SF0SECRETORY 23, ISOFORM Ecoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig123445contigH-elongata_contig123445:1391..1540 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig123445.1772.1mRNA_H-elongata_contig123445.1772.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig123445 1391..1540 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig123445.1772.1 ID=prot_H-elongata_contig123445.1772.1|Name=mRNA_H-elongata_contig123445.1772.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
LYQTLSLLPEEALVGLLTFGTNVMVHELGFTECPKSYVFRGSKEYAAVKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006896Sec23/24_trunk_dom
IPR036465vWFA_dom_sf
IPR037364Sec23