prot_H-elongata_contig1233.1762.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1233.1762.1
Unique Nameprot_H-elongata_contig1233.1762.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length481
Homology
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BLAST of mRNA_H-elongata_contig1233.1762.1 vs. uniprot
Match: D7FV95_ECTSI (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV95_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 9.420e-96
Identity = 172/359 (47.91%), Postives = 240/359 (66.85%), Query Frame = 0 
Query:  125 LPELAGEQEGGEGAQDLEVRRESPFPSSSERGALEAAAASQKALVAGKRGLIIDVEVKELDDESPEFDPDLMIHFVTEVGKNLASVTGKTTIMLRGDHLVTRATETLHRENIQAVEAGFDPREDVSFCSMRTRNLDDEGEPDSMDEFATRTARKISDDERLVMIIGPRSNADVIVMREVVKAARGRSVVLVNPRMTYMPRETSEYDTAYLLRQFTVRPVKKDPKKEAKKSPFRITSRQRKQQAIFSELGQEVPKVLLTRAFPDDFKLYVDIDGKGFLLEDTYDEKPHPSMVCLGAQTIIEEAQRRVSMKARMTAATERQREILAMWDEDXXXXXXXXXD---VVPRRLTDEEIDSRLRD 480
            LPEL GE          E +RE+PFP+SS+RGALEA++ASQ+AL+AGKRGLIIDVEV+++DD   EFD ++ I F T++ K LA+V+G+  ++LRG HL  +ATE L + N +  E G +PR D+SFCS +  N DDE +  SM +FA+ T    +++ER+ +++ PR   DV V+RE++  A+GR VVL+ PRM YMP ET  ++T Y L+Q+ V+PV  +PKK  K    R+T   + QQ I+SELGQ +P+VL+TRAFP DFKLY+DIDGKGF LE TYD KP P++V   AQ  I E Q+RV+++ +   A +   E    +D D         +   VVP   T++EI++RLRD
Sbjct:   56 LPELEGE--------GPETKRENPFPTSSDRGALEASSASQQALLAGKRGLIIDVEVRQMDDTHAEFDEEMQIDFATDISKALATVSGRVKVLLRGIHLAEKATEMLQKANTKGEEEGIEPRRDISFCSFQMANTDDEDDEKSMRDFAS-TLGLANEEERVFLMVCPRRLVDVTVLREIILVAKGRPVVLITPRMPYMPVETDGFETVYQLKQYNVQPVPTNPKKRIKN--VRLTRLGQNQQTIYSELGQVIPRVLVTRAFPGDFKLYLDIDGKGFQLEKTYDAKPQPAVVSFTAQNKIREVQQRVTLQEKRVVAKDHGVEDDDDFDWDTINDDLEEGEEPFVVPPMPTEDEINARLRD 403
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1233.1762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV95_ECTSI9.420e-9647.91DUF1995 domain-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 150..412
e-value: 4.8E-9
score: 36.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..480

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1233contigH-elongata_contig1233:6445..11149 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1233.1762.1mRNA_H-elongata_contig1233.1762.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1233 6373..12259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1233.1762.1 ID=prot_H-elongata_contig1233.1762.1|Name=mRNA_H-elongata_contig1233.1762.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=481bp
MPCRSAIISQDARIMSHGVVACLLVVFASFRRASGWTLNIDVPFQAAMKH
VGQARHSTSLSLTPRDVERLSEGSDSEEDGDAELAARAAREALEKMWSSS
TQPSYDKPPTGELNNSDRTFESRELPELAGEQEGGEGAQDLEVRRESPFP
SSSERGALEAAAASQKALVAGKRGLIIDVEVKELDDESPEFDPDLMIHFV
TEVGKNLASVTGKTTIMLRGDHLVTRATETLHRENIQAVEAGFDPREDVS
FCSMRTRNLDDEGEPDSMDEFATRTARKISDDERLVMIIGPRSNADVIVM
REVVKAARGRSVVLVNPRMTYMPRETSEYDTAYLLRQFTVRPVKKDPKKE
AKKSPFRITSRQRKQQAIFSELGQEVPKVLLTRAFPDDFKLYVDIDGKGF
LLEDTYDEKPHPSMVCLGAQTIIEEAQRRVSMKARMTAATERQREILAMW
DEDEDDDDDDDNDVVPRRLTDEEIDSRLRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995