prot_H-elongata_contig123069.1752.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig123069.1752.1 vs. uniprot
Match: A0A6H5JLZ3_9PHAE (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLZ3_9PHAE) HSP 1 Score: 133 bits (334), Expect = 1.420e-37 Identity = 66/84 (78.57%), Postives = 73/84 (86.90%), Query Frame = 0
Query: 3 VRLPGKNSKTPQAFAFGTPYLEIRDNLVRLDEALFRRNRVLGLLERDAVTKRAPERWQDLESQEAASFDVVVCFESRVFDLVVE 86
VRLPGK+SK+PQ+F FGTPY+EIRD L R +EALFRRN VLGLLER+A TKRAPERWQ L+ ASFDVVVCFESRVFDLVVE
Sbjct: 22 VRLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERNATTKRAPERWQSLDGGHVASFDVVVCFESRVFDLVVE 105
BLAST of mRNA_H-elongata_contig123069.1752.1 vs. uniprot
Match: D8LTB5_ECTSI (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB5_ECTSI) HSP 1 Score: 137 bits (345), Expect = 6.860e-37 Identity = 67/85 (78.82%), Postives = 75/85 (88.24%), Query Frame = 0
Query: 3 VRLPGKNSKTPQAFAFGTPYLEIRDNLVRLDEALFRRNRVLGLLERDAVTKRAPERWQDLESQEAASFDVVVCFESRVFDLVVEG 87
VRLPGK+SK+PQ+F FGTPY+EIRD L R +EALFRRN VLGLLER+A TKRAPERWQ L+ + ASFDVVVCFESRVFDLVVEG
Sbjct: 178 VRLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERNATTKRAPERWQSLDGEHVASFDVVVCFESRVFDLVVEG 262
BLAST of mRNA_H-elongata_contig123069.1752.1 vs. uniprot
Match: D8LSD4_ECTSI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD4_ECTSI) HSP 1 Score: 100 bits (250), Expect = 2.450e-24 Identity = 49/86 (56.98%), Postives = 65/86 (75.58%), Query Frame = 0
Query: 3 VRLPGKNSKTPQAFAFGTPYLEIRDNLVRLDEALFRRNRVLGLLERDAVTKRAPERWQDLESQEAASFDVVVCFESRVFDLVVEGT 88
VRLPGK+ +P+ F FGTPY +I D L DEALF +N +L L+ R+A+ K AP+R+Q++E + A FDVV+CFE+RVF LVVEGT
Sbjct: 140 VRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVEGT 225
BLAST of mRNA_H-elongata_contig123069.1752.1 vs. uniprot
Match: A0A835Z2K1_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2K1_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 7.530e-24 Identity = 46/84 (54.76%), Postives = 60/84 (71.43%), Query Frame = 0
Query: 3 VRLPGKNSKTPQAFAFGTPYLEIRDNLVRLDEALFRRNRVLGLLERDAVTKRAPERWQDLESQEAASFDVVVCFESRVFDLVVE 86
V+LPG++ P F FGTPY+E+ D L D+ L+ RN VL LL RDA TKR PERWQDL S ++DVV+CFE+R+FD+ V+
Sbjct: 33 VKLPGRSRGEPAVFPFGTPYIEMHDILWAADKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQ 116
BLAST of mRNA_H-elongata_contig123069.1752.1 vs. uniprot
Match: A0A067BH95_SAPPC (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BH95_SAPPC) HSP 1 Score: 92.4 bits (228), Expect = 4.530e-22 Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 0
Query: 1 SRVRLPGKNSKTPQAFAFGTPYLEIRDNLVRLDEALFRRNRVLGLLERDAVTKRAPERWQDLESQEAASFDVVVCFESRVFDLVVEGT 88
++VR PG++ P + F TPY + L +EALFR N VL +LERD +TK+AP++WQD + + A DVVVCFE R+FD+V+EG+
Sbjct: 38 NKVRFPGRSRYEPHIYEFFTPYEVMYRELKAENEALFRHNGVLAMLERDILTKKAPQKWQDNSTTDLAQLDVVVCFEDRIFDIVLEGS 125
BLAST of mRNA_H-elongata_contig123069.1752.1 vs. uniprot
Match: A0A6H5KZG9_9PHAE (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG9_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 1.650e-21 Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 0
Query: 3 VRLPGKNSKTPQAFAFGTPYLEIRDNLVRLDEALFRRNRVLGLLERDAVTKRAPERWQDLESQEAASFDVVVCFESRVFDLVVE 86
VRLPGK+ +P+ F FGTPY +I D L DEALF +N +L L+ R+A+ K AP+R+Q++E + A FDVV+CFE+RVF LVVE
Sbjct: 236 VRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVE 319
BLAST of mRNA_H-elongata_contig123069.1752.1 vs. uniprot
Match: B7G244_PHATC (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G244_PHATC) HSP 1 Score: 90.5 bits (223), Expect = 7.170e-21 Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 0
Query: 1 SRVRLPGKNSKTPQAFAFGTPYLEIRDNLVRL--DEALFRRNRVLGLLERDAVTKRAPERWQDLESQEAASFDVVVCFESRVFDLVVE 86
++VRLPG+ + P+ F FGTPY E+ + D A F RN VL L R A KRAPERWQD+ S++AA DVV+ FE R+FD V+E
Sbjct: 38 TQVRLPGRTAMEPRIFKFGTPYEEMYQQMSSTAEDAAYFERNGVLQLCSRGAAVKRAPERWQDISSEDAAKHDVVIAFEERIFDAVIE 125
BLAST of mRNA_H-elongata_contig123069.1752.1 vs. uniprot
Match: A0A425CYI4_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A425CYI4_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 4.070e-20 Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0
Query: 3 VRLPGKNSKTPQAFAFGTPYLEIRDNLVRLDEALFRRNRVLGLLERDAVTKRAPERWQDLESQEAASFDVVVCFESRVFDLVVE 86
VR PG N P+ F F TPY + L +E LFRRN VL +LERD +TK+AP++WQ E A DVV+CFE R+FD+V+E
Sbjct: 2 VRFPGPNPYEPRIFPFFTPYEVMYRELKSENEQLFRRNGVLAMLERDIITKKAPQKWQGNSMDELAKLDVVLCFEDRIFDIVME 85
BLAST of mRNA_H-elongata_contig123069.1752.1 vs. uniprot
Match: A0A7R9WPY3_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WPY3_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 4.140e-20 Identity = 46/94 (48.94%), Postives = 60/94 (63.83%), Query Frame = 0
Query: 1 SRVRLPGKNSKTPQAFAFGTPYLEIRDNLVRL--DEALFRRNRVLGLLERDAVTKRAPERWQDLESQEAASFDVVVCFESRVFDLVVEGTFVKH 92
++VRLPGKNS P+ F FGTPY + +N+ DEA F RN VL L +R A KR P+RWQD+ S+ DVV+ FE R+FD VVE ++
Sbjct: 132 TQVRLPGKNSMEPKVFKFGTPYEHMYNNMCATPEDEAFFARNGVLQLCKRGAAVKRGPQRWQDMPSEWIRQHDVVIAFEERIFDAVVEDLQIRE 225
BLAST of mRNA_H-elongata_contig123069.1752.1 vs. uniprot
Match: A0A5D6YDL3_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDL3_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 6.860e-20 Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 0
Query: 1 SRVRLPGKNSKTPQAFAFGTPYLEIRDNLVRLDEALFRRNRVLGLLERDAVTKRAPERWQDLESQEAASFDVVVCFESRVFDLVVE 86
++VR PG + P+ F F TPY + D L R + LF RN VL +LERD +TK+ P+RWQDL +E DVV+CF+ R+F++V+E
Sbjct: 52 NKVRFPGPSRYDPRIFEFFTPYQRMYDELKRENADLFHRNGVLAMLERDILTKKCPQRWQDLSVRELRGLDVVLCFDDRIFEIVLE 137 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig123069.1752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig123069.1752.1 ID=prot_H-elongata_contig123069.1752.1|Name=mRNA_H-elongata_contig123069.1752.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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