prot_H-elongata_contig122854.1741.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig122854.1741.1
Unique Nameprot_H-elongata_contig122854.1741.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig122854.1741.1 vs. uniprot
Match: A0A6H5LBY7_9PHAE (Fe/B12 periplasmic-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBY7_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 1.990e-15
Identity = 35/41 (85.37%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    3 IGGGLEQKLVGVTHECDYPPNVVARCERVTTSEINPHTMSQ 43
            IGGGLE  LVGVTHECD+PP VVARCERVT SEINPH MSQ
Sbjct:   25 IGGGLEAHLVGVTHECDHPPAVVARCERVTNSEINPHKMSQ 65          
BLAST of mRNA_H-elongata_contig122854.1741.1 vs. uniprot
Match: A0A835YMX1_9STRA (Periplasmic binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMX1_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.680e-8
Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 0
Query:    7 LEQKLVGVTHECDYPPNVVARCERVTTSEINPHTMSQ 43
            L   LV VTHECDYPP VV RC R+TTS INP  ++Q
Sbjct:   25 LRNSLVAVTHECDYPPEVVERCTRITTSHINPAKLTQ 61          
BLAST of mRNA_H-elongata_contig122854.1741.1 vs. uniprot
Match: A0A7S4A870_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A870_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 6.100e-6
Identity = 28/52 (53.85%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    1 TEIGGGL--EQKLVGVTHECDYPPN-------VVARCERVTTSEINPHTMSQ 43
            TEI GGL  E  LVGV+HECD  P        + A CERVTTS+I+PH + Q
Sbjct:   53 TEIVGGLGLEGHLVGVSHECDVAPTADRLRAVLEAGCERVTTSDIDPHALPQ 104          
BLAST of mRNA_H-elongata_contig122854.1741.1 vs. uniprot
Match: A0A8J2T1R9_9STRA (Diphthine--ammonia ligase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1R9_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 7.820e-6
Identity = 28/52 (53.85%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    1 TEIGGGL--EQKLVGVTHECDYPPN-------VVARCERVTTSEINPHTMSQ 43
            TEI GGL  E  LVGV+HECD  P        + A CERVTTS+I+PH + Q
Sbjct:   30 TEIVGGLGLEGHLVGVSHECDVAPTADRLRAVLEAGCERVTTSDIDPHALPQ 81          
BLAST of mRNA_H-elongata_contig122854.1741.1 vs. uniprot
Match: A0A7W1JEQ6_9BACT (ABC transporter substrate-binding protein (Fragment) n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7W1JEQ6_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 1.340e-5
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    6 GLEQKLVGVTHECDYPPNVVARCERVTTSEINPHTMS--QVTHIIRT 50
            GLE  LVGVTHECDYPP V+ +   +T S I+  TMS  ++ H +RT
Sbjct:   23 GLEDALVGVTHECDYPPAVIGK-PVLTASRISHQTMSSAEIDHAVRT 68          
BLAST of mRNA_H-elongata_contig122854.1741.1 vs. uniprot
Match: A0A2V8LSY1_9BACT (Cobalamin-binding protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8LSY1_9BACT)

HSP 1 Score: 49.7 bits (117), Expect = 1.420e-5
Identity = 23/46 (50.00%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    6 GLEQKLVGVTHECDYPPNVVARCERVTTSEINPHTMS--QVTHIIR 49
            GLE  LVG+THECDYPP+V  +  R+T+S+I+  TM+  ++ H +R
Sbjct:   18 GLEDGLVGITHECDYPPSVAGK-PRLTSSQISHETMTSAEIDHAVR 62          
BLAST of mRNA_H-elongata_contig122854.1741.1 vs. uniprot
Match: A0A7S4V8M0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V8M0_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 1.460e-5
Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    6 GLEQKLVGVTHECDYPPNVVA--RCERVTTSEINPHTMSQ 43
            GL   +VG+THECDYP  + +  R   VTTS+INP TM+Q
Sbjct:    8 GLSSNIVGITHECDYPTELTSSGRARVVTTSDINPRTMTQ 47          
BLAST of mRNA_H-elongata_contig122854.1741.1 vs. uniprot
Match: A0A3A0AQV4_9CHLR (Cobalamin-binding protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0AQV4_9CHLR)

HSP 1 Score: 49.3 bits (116), Expect = 1.920e-5
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    1 TEIGG--GLEQKLVGVTHECDYPPNVVARCERVTTSEI 36
            TEI G  GLE+ LVGV+HECDYPP+VVA   R+T S +
Sbjct:   11 TEIVGALGLEETLVGVSHECDYPPDVVAGLPRLTRSAL 48          
BLAST of mRNA_H-elongata_contig122854.1741.1 vs. uniprot
Match: A0A136P1P1_9BACT (Vitamin B12-binding protein n=1 Tax=Chlorobi bacterium OLB7 TaxID=1619898 RepID=A0A136P1P1_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 2.670e-5
Identity = 20/38 (52.63%), Postives = 26/38 (68.42%), Query Frame = 0
Query:    6 GLEQKLVGVTHECDYPPNVVARCERVTTSEINPHTMSQ 43
            G E+ LVG+THECDYPP + A    VT++ INP   S+
Sbjct:   19 GAEESLVGITHECDYPPAITATKPTVTSARINPEMPSE 56          
BLAST of mRNA_H-elongata_contig122854.1741.1 vs. uniprot
Match: A7NN68_ROSCS (Periplasmic binding protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) TaxID=383372 RepID=A7NN68_ROSCS)

HSP 1 Score: 48.1 bits (113), Expect = 4.960e-5
Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 0
Query:    6 GLEQKLVGVTHECDYPPNVVARCERVTTSEINPHTMS 42
            GL   LVGV+HECDYPP+VVA   RVT S I PH +S
Sbjct:   18 GLADMLVGVSHECDYPPDVVADLPRVTYSAI-PHGLS 53          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122854.1741.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5LBY7_9PHAE1.990e-1585.37Fe/B12 periplasmic-binding domain-containing prote... [more]
A0A835YMX1_9STRA3.680e-864.86Periplasmic binding protein n=1 Tax=Tribonema minu... [more]
A0A7S4A870_9STRA6.100e-653.85Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A8J2T1R9_9STRA7.820e-653.85Diphthine--ammonia ligase n=1 Tax=Pelagomonas calc... [more]
A0A7W1JEQ6_9BACT1.340e-553.19ABC transporter substrate-binding protein (Fragmen... [more]
A0A2V8LSY1_9BACT1.420e-550.00Cobalamin-binding protein n=2 Tax=Acidobacteria ba... [more]
A0A7S4V8M0_9STRA1.460e-555.00Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A3A0AQV4_9CHLR1.920e-563.16Cobalamin-binding protein n=1 Tax=Chloroflexi bact... [more]
A0A136P1P1_9BACT2.670e-552.63Vitamin B12-binding protein n=1 Tax=Chlorobi bacte... [more]
A7NN68_ROSCS4.960e-564.86Periplasmic binding protein n=1 Tax=Roseiflexus ca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122854contigH-elongata_contig122854:224..376 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122854.1741.1mRNA_H-elongata_contig122854.1741.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig122854 224..376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig122854.1741.1 ID=prot_H-elongata_contig122854.1741.1|Name=mRNA_H-elongata_contig122854.1741.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
TEIGGGLEQKLVGVTHECDYPPNVVARCERVTTSEINPHTMSQVTHIIRT
*
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