prot_H-elongata_contig122843.1738.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig122843.1738.1
Unique Nameprot_H-elongata_contig122843.1738.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
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BLAST of mRNA_H-elongata_contig122843.1738.1 vs. uniprot
Match: A0A6H5KLE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE3_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 7.350e-20
Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = 0 
Query:    8 LEPSTCLIFMGIVCGSGLRRFEVPYNKRVKREAILRDAIDHRSMSFTMLEKLAGKCTSMNVAAPLASLYTSHTYRTI 84
            L P+TCL+F+GI+C +   RFEVP +K  K +AIL DAI  + +SF MLEKL GKC S++VA P+A+LYT H Y+++
Sbjct:  277 LSPTTCLVFLGIICDAERGRFEVPEDKLAKLDAILTDAISSQVISFQMLEKLVGKCVSLSVAVPVAALYTHHMYKSL 353
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122843.1738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KLE3_9PHAE7.350e-2054.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122843contigH-elongata_contig122843:35..289 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122843.1738.1mRNA_H-elongata_contig122843.1738.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig122843 26..289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig122843.1738.1 ID=prot_H-elongata_contig122843.1738.1|Name=mRNA_H-elongata_contig122843.1738.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
MFLPEWSLEPSTCLIFMGIVCGSGLRRFEVPYNKRVKREAILRDAIDHRS
MSFTMLEKLAGKCTSMNVAAPLASLYTSHTYRTIA
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