prot_H-elongata_contig12269.1730.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12269.1730.1
Unique Nameprot_H-elongata_contig12269.1730.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
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BLAST of mRNA_H-elongata_contig12269.1730.1 vs. uniprot
Match: A0A6H5JWH7_9PHAE (Coiled-coil domain-containing protein 153 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH7_9PHAE)

HSP 1 Score: 48.9 bits (115), Expect = 3.480e-5
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 0 
Query:    1 MTRQYKSMQEELLNRLNQLEGTIEAL 26
            MTRQYK MQEELLNR+NQLEGTI+AL
Sbjct:   26 MTRQYKGMQEELLNRINQLEGTIQAL 51
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12269.1730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JWH7_9PHAE3.480e-588.46Coiled-coil domain-containing protein 153 n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 9..68
IPR033585Coiled-coil domain-containing protein 153PANTHERPTHR28656FAMILY NOT NAMEDcoord: 1..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12269contigH-elongata_contig12269:4328..5160 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12269.1730.1mRNA_H-elongata_contig12269.1730.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12269 4328..5181 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12269.1730.1 ID=prot_H-elongata_contig12269.1730.1|Name=mRNA_H-elongata_contig12269.1730.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
MTRQYKSMQEELLNRLNQLEGTIEALQDELERSRLELERLEKEKDSAIAA
KDKEISQMRGKMEDMAQEFGDMLKETLDRMRERIEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033585CCDC153