prot_H-elongata_contig122568.1722.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig122568.1722.1
Unique Nameprot_H-elongata_contig122568.1722.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length179
Homology
BLAST of mRNA_H-elongata_contig122568.1722.1 vs. uniprot
Match: D7FXW9_ECTSI (Intraflagellar transport protein 122 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW9_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 1.630e-68
Identity = 137/247 (55.47%), Postives = 156/247 (63.16%), Query Frame = 0
Query:    1 QVKIKCRDYVEKVAIFRDRLAVRLLNKVHVYELTHQDDNYDLRYRLKDKIYLTSP-------------------------------------------------------------------SSLLLVTWNNVVLCEGNVLQLYDFAGMKVREWVLDAAIRSARVDGGPAGGEVLLLGLENGTVLQVFVNNAFPAELVKV-TAPVVCCAVSLHRRKASCAIAVVDAKRRIMLFDVLSKELIFQESGA 179
            +V+IKCRDYVE++AIFRDRLAVRL +KVHVYELT  DD YDLRYRLKDKIYL S                                                                    SS LLVTWNNVVLCEG VL+L+DF+G KVREWVLDAA+RSA VDGGPAGGE LLLGLENG VLQVFV+NAFP  LVK  TA VV CA+S+HR+K    +AVVDAK R+M+FDV+SKE+ FQE+GA
Sbjct:  326 KVRIKCRDYVEQIAIFRDRLAVRLPDKVHVYELTQHDDKYDLRYRLKDKIYLPSAVPSSSSSTLSXXXXXXXXXXXXXXXRGSESKEDAARHQGSSSLHSQRLSTGSVDGLGGAPRDGDGGGSSFLLVTWNNVVLCEGRVLKLFDFSGAKVREWVLDAAVRSASVDGGPAGGESLLLGLENGVVLQVFVDNAFPVVLVKASTAAVVGCAMSVHRKK----VAVVDAKSRVMVFDVMSKEVEFQETGA 568          
BLAST of mRNA_H-elongata_contig122568.1722.1 vs. uniprot
Match: A0A813ARC0_9DINO (Ift122 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813ARC0_9DINO)

HSP 1 Score: 170 bits (430), Expect = 4.520e-49
Identity = 87/179 (48.60%), Postives = 130/179 (72.63%), Query Frame = 0
Query:    1 QVKIKCRDYVEKVAIFRDRLAVRLLNKVHVYELTHQDDNYDLRYRLKDKIYLTSPSSLLLVTWNNVVLCEGNVLQLYDFAGMKVREWVLDAAIRSARVDGGPAGGEVLLLGLENGTVLQVFVNNAFPAELVKVTAPVVCCAVSLHRRKASCAIAVVDAKRRIMLFDVLSKELIFQESGA 179
            +V+IKCRDYV+K+A++RDRLAV+  ++V +YEL   DD YD+ Y+ ++KI+     +LL+VT  +V+LC+   LQLYD++G+K REWVL+A IR  +V GGP G E LL+GL++GTVL++FV+N FP  LVK  A + C  +S+ R+K    +AVVD     ++FD+ +KE +F+E+ A
Sbjct:   22 RVRIKCRDYVKKIAVYRDRLAVQTPDRVTIYELD-PDDPYDMHYKYEEKIHKKLDCNLLVVTSEHVILCQERKLQLYDYSGVKTREWVLEAVIRYIKVVGGPRGREGLLVGLKSGTVLKIFVDNPFPIHLVKHNASIRCLDLSMTRKK----LAVVDENASCLVFDLETKEQVFKEANA 195          
BLAST of mRNA_H-elongata_contig122568.1722.1 vs. uniprot
Match: A0A7S0WY57_9CHLO (Intraflagellar transport protein 122 homolog n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WY57_9CHLO)

HSP 1 Score: 169 bits (429), Expect = 1.700e-45
Identity = 86/179 (48.04%), Postives = 126/179 (70.39%), Query Frame = 0
Query:    1 QVKIKCRDYVEKVAIFRDRLAVRLLNKVHVYELTHQDDNYDLRYRLKDKIYLTSPSSLLLVTWNNVVLCEGNVLQLYDFAGMKVREWVLDAAIRSARVDGGPAGGEVLLLGLENGTVLQVFVNNAFPAELVKVTAPVVCCAVSLHRRKASCAIAVVDAKRRIMLFDVLSKELIFQESGA 179
            +V+IKCRDYV+K+A+++DRLAV+L ++V +YEL+H DD YD+ Y++  KI      +LL+VT  +V+LC+   LQLY F G + REWVL++ IR  +V GGP G E LL+GL++G +L++F+NN FP +L+K T  + C  +S  R K    +AVVD     M+FD+ SKEL+F+E  A
Sbjct:  325 KVRIKCRDYVKKIAVYKDRLAVQLPDRVIIYELSH-DDAYDMHYKVSTKIQKRLQCNLLVVTSQHVILCQEKKLQLYSFTGTQEREWVLESVIRYIKVVGGPNGQEGLLIGLKSGMILKIFINNQFPIQLIKHTTSIRCLDLSASRSK----LAVVDENTNAMVFDLSSKELLFEEKSA 498          
BLAST of mRNA_H-elongata_contig122568.1722.1 vs. uniprot
Match: A0A6U8LP55_9EUGL (Intraflagellar transport protein 122 homolog n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6U8LP55_9EUGL)

HSP 1 Score: 168 bits (425), Expect = 5.850e-45
Identity = 85/179 (47.49%), Postives = 132/179 (73.74%), Query Frame = 0
Query:    1 QVKIKCRDYVEKVAIFRDRLAVRLLNKVHVYELTHQDDNYDLRYRLKDKIYLTSPSSLLLVTWNNVVLCEGNVLQLYDFAGMKVREWVLDAAIRSARVDGGPAGGEVLLLGLENGTVLQVFVNNAFPAELVKVTAPVVCCAVSLHRRKASCAIAVVDAKRRIMLFDVLSKELIFQESGA 179
            +++I+C+DYV+K+AI++DRLAV+L ++V +YEL + DD+YDL+++LK++I      +LL+VT  ++VLC+   LQLY+F+G K REWVL++ IR  +V GGP   E LL+GL+NGTVL++F++N FP +L+K+ +PV C  +S  R K    +AVVD     +++ + +KELIFQE  A
Sbjct:  325 KLRIRCKDYVKKIAIYKDRLAVQLSDRVMIYEL-YYDDSYDLKHKLKERIMKKLECNLLVVTSMHIVLCQEKKLQLYNFSGGKQREWVLESVIRYIKVVGGPIEREALLVGLKNGTVLKIFIDNPFPIQLIKLNSPVRCLDLSASRMK----LAVVDENANCLVYHLKNKELIFQELNA 498          
BLAST of mRNA_H-elongata_contig122568.1722.1 vs. uniprot
Match: H9CTG6_CHLRE (Intraflagellar transport protein 122 homolog n=7 Tax=Chlamydomonadales TaxID=3042 RepID=H9CTG6_CHLRE)

HSP 1 Score: 166 bits (419), Expect = 3.760e-44
Identity = 84/179 (46.93%), Postives = 130/179 (72.63%), Query Frame = 0
Query:    1 QVKIKCRDYVEKVAIFRDRLAVRLLNKVHVYELTHQDDNYDLRYRLKDKIYLTSPSSLLLVTWNNVVLCEGNVLQLYDFAGMKVREWVLDAAIRSARVDGGPAGGEVLLLGLENGTVLQVFVNNAFPAELVKVTAPVVCCAVSLHRRKASCAIAVVDAKRRIMLFDVLSKELIFQESGA 179
            +V+IKC+DYV+K+A+++D+LAV+L NKV +YEL + DD +D+ Y+   KI      +LL+VT ++V+LC+   LQLY+F G+K REWVLD+ IR  +V GGP   E LL+GL++G +L++FV+N FP  L+K TA V C  +S  R K    +AVVD   +++++++++KEL+F+ES A
Sbjct:  323 KVRIKCKDYVKKIAVYKDKLAVQLQNKVVIYELANADD-FDMHYQSATKIQQKLDCNLLVVTSHHVILCQEKKLQLYNFDGVKEREWVLDSVIRYIKVVGGPPRREGLLVGLKSGAILKIFVDNPFPIPLIKHTASVRCLDLSASRNK----LAVVDENAKVLVYNLITKELVFEESNA 496          
BLAST of mRNA_H-elongata_contig122568.1722.1 vs. uniprot
Match: A0A150GZ63_GONPE (Intraflagellar transport protein 122 homolog n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GZ63_GONPE)

HSP 1 Score: 166 bits (419), Expect = 3.850e-44
Identity = 84/179 (46.93%), Postives = 130/179 (72.63%), Query Frame = 0
Query:    1 QVKIKCRDYVEKVAIFRDRLAVRLLNKVHVYELTHQDDNYDLRYRLKDKIYLTSPSSLLLVTWNNVVLCEGNVLQLYDFAGMKVREWVLDAAIRSARVDGGPAGGEVLLLGLENGTVLQVFVNNAFPAELVKVTAPVVCCAVSLHRRKASCAIAVVDAKRRIMLFDVLSKELIFQESGA 179
            +V+IKC+DYV+K+A+++D+LAV+L NKV +YEL + DD +D+ Y+   KI      +LL+VT ++V+LC+   LQLY+F G+K REWVLD+ IR  +V GGP   E LL+GL++G +L++FV+N FP  L+K TA V C  +S  R K    +AVVD   +++++++++KEL+F+ES A
Sbjct:  690 KVRIKCKDYVKKIAVYKDKLAVQLQNKVVIYELANADD-FDMHYQSATKIQQKLDCNLLVVTSHHVILCQEKKLQLYNFDGVKEREWVLDSVIRYIKVVGGPPRREGLLVGLKSGAILKIFVDNPFPIPLIKHTASVRCLDLSASRNK----LAVVDENAKVLVYNLITKELVFEESNA 863          
BLAST of mRNA_H-elongata_contig122568.1722.1 vs. uniprot
Match: D8TQ61_VOLCA (Intraflagellar transport protein 122 homolog n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TQ61_VOLCA)

HSP 1 Score: 165 bits (418), Expect = 5.260e-44
Identity = 84/179 (46.93%), Postives = 130/179 (72.63%), Query Frame = 0
Query:    1 QVKIKCRDYVEKVAIFRDRLAVRLLNKVHVYELTHQDDNYDLRYRLKDKIYLTSPSSLLLVTWNNVVLCEGNVLQLYDFAGMKVREWVLDAAIRSARVDGGPAGGEVLLLGLENGTVLQVFVNNAFPAELVKVTAPVVCCAVSLHRRKASCAIAVVDAKRRIMLFDVLSKELIFQESGA 179
            +V+IKC+DYV+K+A+++D+LAV+L NKV +YEL + DD +D+ Y+   KI      +LL+VT ++V+LC+   LQLY+F G+K REWVLD+ IR  +V GGP   E LL+GL++G +L++FV+N FP  L+K TA V C  +S  R K    +AVVD   +++++++++KEL+F+ES A
Sbjct:  797 KVRIKCKDYVKKIAVYKDKLAVQLQNKVVIYELANADD-FDMHYQSATKIQQKLDCNLLVVTSHHVILCQEKKLQLYNFDGVKEREWVLDSVIRYIKVVGGPPRREGLLVGLKSGAILKIFVDNPFPIPLIKHTASVRCLDLSSSRNK----LAVVDENAKVLVYNLITKELVFEESNA 970          
BLAST of mRNA_H-elongata_contig122568.1722.1 vs. uniprot
Match: A0A7S0T117_9CHLO (Intraflagellar transport protein 122 homolog (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T117_9CHLO)

HSP 1 Score: 164 bits (414), Expect = 1.740e-43
Identity = 82/179 (45.81%), Postives = 128/179 (71.51%), Query Frame = 0
Query:    1 QVKIKCRDYVEKVAIFRDRLAVRLLNKVHVYELTHQDDNYDLRYRLKDKIYLTSPSSLLLVTWNNVVLCEGNVLQLYDFAGMKVREWVLDAAIRSARVDGGPAGGEVLLLGLENGTVLQVFVNNAFPAELVKVTAPVVCCAVSLHRRKASCAIAVVDAKRRIMLFDVLSKELIFQESGA 179
            +V+IKCRDYV+K+A+++DRLAV+L ++V +YEL H DD+YD+ YR+  KI      +LL+VT ++V+LC    LQLY F G+  REWVL+A IR  ++ GGP   E LL+GL+NG + ++F++NAFP +L+K T+ + C  +S  R+K    +AVVD    ++++D+ +K+LIF++  A
Sbjct:  325 KVRIKCRDYVKKIAVYKDRLAVQLPDRVIIYELLH-DDSYDMHYRVATKIQKKLDCNLLVVTSHHVILCLEKKLQLYGFNGVMEREWVLEAVIRYIKIVGGPENREGLLVGLKNGMIQKIFIDNAFPIQLIKHTSSIRCLDLSFRRQK----LAVVDESTAVVVYDLATKKLIFEDKNA 498          
BLAST of mRNA_H-elongata_contig122568.1722.1 vs. uniprot
Match: A0A383W1F4_TETOB (Intraflagellar transport protein 122 homolog n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W1F4_TETOB)

HSP 1 Score: 164 bits (414), Expect = 1.770e-43
Identity = 82/179 (45.81%), Postives = 128/179 (71.51%), Query Frame = 0
Query:    1 QVKIKCRDYVEKVAIFRDRLAVRLLNKVHVYELTHQDDNYDLRYRLKDKIYLTSPSSLLLVTWNNVVLCEGNVLQLYDFAGMKVREWVLDAAIRSARVDGGPAGGEVLLLGLENGTVLQVFVNNAFPAELVKVTAPVVCCAVSLHRRKASCAIAVVDAKRRIMLFDVLSKELIFQESGA 179
            +V+IKCRDYV+KVA+++DR+AV+L ++V +Y+L    D+ D++YR   KI      +LL+VT N+++LC+   LQLY F G+ VREW++DA +R  +V GGPAG E LL+GL++G VL+++V+NAFP  L+K T  + C  +S  RRK    +A+VD    ++++D+ +KEL+F+  GA
Sbjct:  322 KVRIKCRDYVKKVAVYKDRVAVQLPSRVVLYKLDSSADDMDMQYRSAAKINQKLECNLLVVTSNHILLCQEKQLQLYSFEGVLVREWMMDAVVRYIKVAGGPAGKEGLLVGLKHGAVLKIYVDNAFPIPLIKHTCSIRCLDLSCSRRK----LALVDETNTVVVYDLHTKELLFESKGA 496          
BLAST of mRNA_H-elongata_contig122568.1722.1 vs. uniprot
Match: A0A388KCR6_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KCR6_CHABU)

HSP 1 Score: 160 bits (404), Expect = 2.920e-43
Identity = 81/179 (45.25%), Postives = 129/179 (72.07%), Query Frame = 0
Query:    1 QVKIKCRDYVEKVAIFRDRLAVRLLNKVHVYELTHQDDNYDLRYRLKDKIYLTSPSSLLLVTWNNVVLCEGNVLQLYDFAGMKVREWVLDAAIRSARVDGGPAGGEVLLLGLENGTVLQVFVNNAFPAELVKVTAPVVCCAVSLHRRKASCAIAVVDAKRRIMLFDVLSKELIFQESGA 179
            +V+IKCRDYV+++A++R+RLAV+L ++V +YEL  +DD +D++YR+  KI      +LL++T  +++LC+   LQLY+F G K REW+LD+ IR  +V GGP G E LL+GL++G +L++F++NAFP +L+K  A + C  +S  R+K    +AVVD    I++F + +KEL+F+E  A
Sbjct:   14 KVRIKCRDYVKRIAVYRERLAVQLPDRVIIYELA-EDDGFDMQYRVSTKIQRKLDCNLLVLTSMHIILCQEKKLQLYNFDGNKEREWLLDSIIRYIKVIGGPNGREGLLVGLKSGLILKIFIDNAFPIQLIKHHASIRCLDLSSTRQK----LAVVDENTSILVFSLQTKELLFEEKNA 187          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122568.1722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXW9_ECTSI1.630e-6855.47Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A813ARC0_9DINO4.520e-4948.60Ift122 protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A7S0WY57_9CHLO1.700e-4548.04Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A6U8LP55_9EUGL5.850e-4547.49Intraflagellar transport protein 122 homolog n=1 T... [more]
H9CTG6_CHLRE3.760e-4446.93Intraflagellar transport protein 122 homolog n=7 T... [more]
A0A150GZ63_GONPE3.850e-4446.93Intraflagellar transport protein 122 homolog n=1 T... [more]
D8TQ61_VOLCA5.260e-4446.93Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A7S0T117_9CHLO1.740e-4345.81Intraflagellar transport protein 122 homolog (Frag... [more]
A0A383W1F4_TETOB1.770e-4345.81Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A388KCR6_CHABU2.920e-4345.25Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039857Intraflagellar transport protein 122 homologPANTHERPTHR12764WD REPEAT DOMAIN-RELATEDcoord: 2..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122568contigH-elongata_contig122568:282..1939 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122568.1722.1mRNA_H-elongata_contig122568.1722.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig122568 282..1939 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig122568.1722.1 ID=prot_H-elongata_contig122568.1722.1|Name=mRNA_H-elongata_contig122568.1722.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=179bp
QVKIKCRDYVEKVAIFRDRLAVRLLNKVHVYELTHQDDNYDLRYRLKDKI
YLTSPSSLLLVTWNNVVLCEGNVLQLYDFAGMKVREWVLDAAIRSARVDG
GPAGGEVLLLGLENGTVLQVFVNNAFPAELVKVTAPVVCCAVSLHRRKAS
CAIAVVDAKRRIMLFDVLSKELIFQESGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039857Ift122