prot_H-elongata_contig12210.1691.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12210.1691.1
Unique Nameprot_H-elongata_contig12210.1691.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length202
Homology
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BLAST of mRNA_H-elongata_contig12210.1691.1 vs. uniprot
Match: D8LHN0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN0_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 1.090e-102
Identity = 163/208 (78.37%), Postives = 182/208 (87.50%), Query Frame = 0 
Query:    1 MLEGVAVPETLVLDRYRLVVIAAGAEQAAYTASLVAFARQALAAARVQFARKDEDRVRKALMVLFETEDVTSADICAQVAEMTRLIAVAAERALPYDQLSMLSARSRNVLTTGDCPVYKLFLRRTLALLRHTLVEGGLPEDRFEEALRKAGLLDYKDFILDRVVRPLMVVQRHSEAVFSTFYNEIIPLALKTT-------HAKTLEVE 201
            MLEGVAVPETL+LDRYRLVVIAA AEQAAYTASLVAFARQ L A R+  AR DE+RVR ALMVLFETEDVTSADICAQVAEMTR++AV A + LP +QLS+LSARSRNVLTTGDCPVYK+FLRRTL LLR TLVEGG+ E+RF EALRKAGLLDYKDF+L RVVRPL+V++RH+EAVF+TFYNEIIPLALKTT       HA+ L V+
Sbjct:    1 MLEGVAVPETLMLDRYRLVVIAAAAEQAAYTASLVAFARQTLGAVRIPLARADEERVRDALMVLFETEDVTSADICAQVAEMTRVVAVNAGKVLPANQLSVLSARSRNVLTTGDCPVYKIFLRRTLGLLRDTLVEGGMSEERFVEALRKAGLLDYKDFLLQRVVRPLVVIERHNEAVFATFYNEIIPLALKTTTPQAMGAHARALNVD 208
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BLAST of mRNA_H-elongata_contig12210.1691.1 vs. uniprot
Match: A0A6H5K7E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E8_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 8.980e-92
Identity = 161/208 (77.40%), Postives = 182/208 (87.50%), Query Frame = 0 
Query:    1 MLEGVAVPETLVLDRYRLVVIAAGAEQAAYTASLVAFARQALAAARVQFARKDEDRVRKALMVLFETEDVTSADICAQVAEMTRLIAVAAERALPYDQLSMLSARSRNVLTTGDCPVYKLFLRRTLALLRHTLVEGGLPEDRFEEALRKAGLLDYKDFILDRVVRPLMVVQRHSEAVFSTFYNEIIPLALKTT-------HAKTLEVE 201
            MLEGVAVPETL+LDRYRLVVIAA AEQAAYTASLVAFARQ L A R+  AR DE+R+R ALMVLFETEDVTSADICAQVAEMTR+++V A + LP +QLS+LSARSRNVLTTGDCPVYK+FLRRTLALLR TLVEGG+ E+RF EALRKAGLLDYKDF+L RVVRPL+V++RH+EAVF+TFYNEIIPLAL TT       HA+ L V+
Sbjct: 1105 MLEGVAVPETLMLDRYRLVVIAAAAEQAAYTASLVAFARQTLGAVRIPLARADEERIRDALMVLFETEDVTSADICAQVAEMTRVVSVNAGKVLPANQLSVLSARSRNVLTTGDCPVYKIFLRRTLALLRDTLVEGGMSEERFVEALRKAGLLDYKDFLLQRVVRPLVVIERHNEAVFATFYNEIIPLALNTTTPQAMGAHARALNVD 1312
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12210.1691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHN0_ECTSI1.090e-10278.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7E8_9PHAE8.980e-9277.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008862T-complex 11PFAMPF05794Tcp11coord: 6..186
e-value: 3.2E-12
score: 46.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12210contigH-elongata_contig12210:376..2043 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12210.1691.1mRNA_H-elongata_contig12210.1691.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12210 376..2043 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12210.1691.1 ID=prot_H-elongata_contig12210.1691.1|Name=mRNA_H-elongata_contig12210.1691.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=202bp
MLEGVAVPETLVLDRYRLVVIAAGAEQAAYTASLVAFARQALAAARVQFA
RKDEDRVRKALMVLFETEDVTSADICAQVAEMTRLIAVAAERALPYDQLS
MLSARSRNVLTTGDCPVYKLFLRRTLALLRHTLVEGGLPEDRFEEALRKA
GLLDYKDFILDRVVRPLMVVQRHSEAVFSTFYNEIIPLALKTTHAKTLEV
E*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008862Tcp11