prot_H-elongata_contig121846.1671.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig121846.1671.1
Unique Name	prot_H-elongata_contig121846.1671.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	88

Homology

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BLAST of mRNA_H-elongata_contig121846.1671.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 2.670e-30
Identity = 64/100 (64.00%), Postives = 74/100 (74.00%), Query Frame = 0

Query:    1 MAEDPQPEEADFSLLEFWKGKST------------GMPFLALIARLYNGIEPTSCQVERNFSVLAFLLGHLRSTTKPGKVERLMLLRLNRLFISEIKALH 88
            +AEDP  EE DFSLLEFW+ +S             G+P LALIARL++GIE TSCQ ERNFS LAFL+G LRS+  PGKVERLM LRLNRL+I E+KALH
Sbjct:  375 LAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALH 474

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BLAST of mRNA_H-elongata_contig121846.1671.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 6.170e-30
Identity = 64/100 (64.00%), Postives = 74/100 (74.00%), Query Frame = 0

Query:    1 MAEDPQPEEADFSLLEFWKGKST------------GMPFLALIARLYNGIEPTSCQVERNFSVLAFLLGHLRSTTKPGKVERLMLLRLNRLFISEIKALH 88
            +AEDP  EE DFSLLEFW+ +S             G+P LALIARL++GIE TSCQ ERNFS LAFL+G LRS+  PGKVERLM LRLNRL+I E+KALH
Sbjct:  703 LAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALH 802

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BLAST of mRNA_H-elongata_contig121846.1671.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 2.530e-18
Identity = 47/101 (46.53%), Postives = 62/101 (61.39%), Query Frame = 0

Query:    1 MAEDPQPEEADFSLLEFWKGKSTG--------------MPFLALIARLYNGIEPTSCQVERNFSVLAFLLGHLRSTTKPGKVERLMLLRLNRLFISEIKAL 87
            +AE+PQ +   F++L +W  + T               MP+LA IARLY GIE TSCQ ERNFS LA L+G LR    P KVER+M +RLNR  ++E++ L
Sbjct:  517 LAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVREL 617

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BLAST of mRNA_H-elongata_contig121846.1671.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 2.570e-18
Identity = 47/101 (46.53%), Postives = 62/101 (61.39%), Query Frame = 0

Query:    1 MAEDPQPEEADFSLLEFWKGKSTG--------------MPFLALIARLYNGIEPTSCQVERNFSVLAFLLGHLRSTTKPGKVERLMLLRLNRLFISEIKAL 87
            +AE+PQ +   F++L +W  + T               MP+LA IARLY GIE TSCQ ERNFS LA L+G LR    P KVER+M +RLNR  ++E++ L
Sbjct:  712 LAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVREL 812

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BLAST of mRNA_H-elongata_contig121846.1671.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.070e-18
Identity = 47/101 (46.53%), Postives = 61/101 (60.40%), Query Frame = 0

Query:    1 MAEDPQPEEADFSLLEFWKGKSTG--------------MPFLALIARLYNGIEPTSCQVERNFSVLAFLLGHLRSTTKPGKVERLMLLRLNRLFISEIKAL 87
            +AE  Q E  DF++L FW  + T               MP+LA IARL+ GIE +SCQ ERNFS L+ L+GHLR      KVER+ML+RLNR  + E++ L
Sbjct:  135 LAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVREL 235

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BLAST of mRNA_H-elongata_contig121846.1671.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.350e-18
Identity = 47/100 (47.00%), Postives = 62/100 (62.00%), Query Frame = 0

Query:    1 MAEDPQPEEADFSLLEFWKGKSTG--------------MPFLALIARLYNGIEPTSCQVERNFSVLAFLLGHLRSTTKPGKVERLMLLRLNRLFISEIKA 86
            +AE PQ +   F+L+ FW  + T               MP+LA IARL+ GIE TSCQ ERNFS LA L+G+LR    P +VER+ML+RLNR  + E++A
Sbjct:  409 LAEQPQLDVDGFNLIGFWNRRGTDSVRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLDEVRA 508

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BLAST of mRNA_H-elongata_contig121846.1671.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.160e-17
Identity = 48/101 (47.52%), Postives = 62/101 (61.39%), Query Frame = 0

Query:    1 MAEDPQPEEADFSLLEFWKGKSTG--------------MPFLALIARLYNGIEPTSCQVERNFSVLAFLLGHLRSTTKPGKVERLMLLRLNRLFISEIKAL 87
            +AE PQ +   F+L+ FW  + T               MP+LA IARL+ GIE TSCQ ERNFS LA L+G LR      KVER+ML+RLNR  ++E++AL
Sbjct:  395 LAEQPQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLLAEVRAL 495

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BLAST of mRNA_H-elongata_contig121846.1671.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.660e-17
Identity = 47/101 (46.53%), Postives = 61/101 (60.40%), Query Frame = 0

Query:    1 MAEDPQPEEADFSLLEFWKGKSTG--------------MPFLALIARLYNGIEPTSCQVERNFSVLAFLLGHLRSTTKPGKVERLMLLRLNRLFISEIKAL 87
            +AE  Q E  DF++L FW  + T               MP+LA IARL+ GIE +SCQ ERNFS L+ L+GHLR      KVER+ML+RLNR  + E++ L
Sbjct:  700 LAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVREL 800

[Close]

BLAST of mRNA_H-elongata_contig121846.1671.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.450e-16
Identity = 46/100 (46.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:    1 MAEDPQPEEADFSLLEFWKGKSTG--------------MPFLALIARLYNGIEPTSCQVERNFSVLAFLLGHLRSTTKPGKVERLMLLRLNRLFISEIKA 86
            +AE PQ +  DF+LL FW  + T               MP+LA IARL+ GIE TSCQ ERNFS LA L+G L       +VER+ML+RLN+  ++E++A
Sbjct:  513 LAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLLAEVRA 612

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BLAST of mRNA_H-elongata_contig121846.1671.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 3.290e-13
Identity = 36/63 (57.14%), Postives = 44/63 (69.84%), Query Frame = 0

Query:   25 MPFLALIARLYNGIEPTSCQVERNFSVLAFLLGHLRSTTKPGKVERLMLLRLNRLFISEIKAL 87
            MP+LA IARLY GIE TSCQ ERNFS  + L+G LR    P K ER M +RLNR  ++E++ L
Sbjct:  344 MPYLAFIARLYLGIEATSCQAERNFSARSHLIGQLRCKILPSKFERTMFIRLNRHLVAEVREL 406

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig121846.1671.1 vs. uniprot

BLAST of mRNA_H-elongata_contig121846.1671.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
A0A6H5KAN7_9PHAE	2.670e-30	64.00	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KJ52_9PHAE	6.170e-30	64.00	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JTB8_9PHAE	2.530e-18	46.53	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JGG8_9PHAE	2.570e-18	46.53	Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec...	[more]
A0A6H5KJT6_9PHAE	3.070e-18	46.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JXV5_9PHAE	3.350e-18	47.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KDJ6_9PHAE	1.160e-17	47.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRT6_9PHAE	1.660e-17	46.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JQI6_9PHAE	1.450e-16	46.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KAS2_9PHAE	3.290e-13	57.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 6..75 e-value: 1.3E-7 score: 31.3
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 6..77

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig121846	contig	H-elongata_contig121846:1250..1513 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig121846.1671.1	mRNA_H-elongata_contig121846.1671.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig121846 1250..1537 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig121846.1671.1 ID=prot_H-elongata_contig121846.1671.1|Name=mRNA_H-elongata_contig121846.1671.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
MAEDPQPEEADFSLLEFWKGKSTGMPFLALIARLYNGIEPTSCQVERNFS
VLAFLLGHLRSTTKPGKVERLMLLRLNRLFISEIKALH

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf