prot_H-elongata_contig121424.1639.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig121424.1639.1
Unique Nameprot_H-elongata_contig121424.1639.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length38
Homology
BLAST of mRNA_H-elongata_contig121424.1639.1 vs. uniprot
Match: D7G5A9_ECTSI (Vesicle docking protein P115 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A9_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 7.560e-11
Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 LERRILECPAGLQALVEVLRDPREEARNEVILLLRQV 37
            LE  ILECPAGLQALVEVLRDPREE RNEVILLL Q+
Sbjct:  134 LEACILECPAGLQALVEVLRDPREEVRNEVILLLGQL 170          
BLAST of mRNA_H-elongata_contig121424.1639.1 vs. uniprot
Match: A0A196S4S6_BLAHN (Intracellular protein transport protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S4S6_BLAHN)

HSP 1 Score: 52.4 bits (124), Expect = 9.010e-7
Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 LERRILECPAGLQALVEVLRDPREEARNEVILLLRQV 37
            +E+ IL CP GLQ LV+VLRD REE RNE++LLLR +
Sbjct:  117 VEKSILGCPMGLQKLVDVLRDNREEVRNEMLLLLRSL 153          
BLAST of mRNA_H-elongata_contig121424.1639.1 vs. uniprot
Match: UPI00071193C3 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI00071193C3)

HSP 1 Score: 50.8 bits (120), Expect = 3.130e-6
Identity = 22/37 (59.46%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 LERRILECPAGLQALVEVLRDPREEARNEVILLLRQV 37
            +E+ IL CP GLQ L++VLRD REE RNE+++LLR +
Sbjct:  144 VEKSILGCPMGLQKLMDVLRDKREEVRNEMLILLRSL 180          
BLAST of mRNA_H-elongata_contig121424.1639.1 vs. uniprot
Match: D8LY34_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LY34_BLAHO)

HSP 1 Score: 47.8 bits (112), Expect = 3.890e-5
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    1 LERRILECPAGLQALVEVLRDPREEARNEVILLLRQV 37
            +E+ IL C  GLQ LV+VL D REE RNE++LLLR +
Sbjct:  147 VEKSILGCSMGLQKLVDVLNDSREEVRNEMLLLLRSL 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig121424.1639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G5A9_ECTSI7.560e-1186.49Vesicle docking protein P115 n=2 Tax=Ectocarpus Ta... [more]
A0A196S4S6_BLAHN9.010e-764.86Intracellular protein transport protein n=1 Tax=Bl... [more]
UPI00071193C33.130e-659.46hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
D8LY34_BLAHO3.890e-559.46Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..37
e-value: 5.5E-7
score: 31.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig121424contigH-elongata_contig121424:677..790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig121424.1639.1mRNA_H-elongata_contig121424.1639.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig121424 677..790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig121424.1639.1 ID=prot_H-elongata_contig121424.1639.1|Name=mRNA_H-elongata_contig121424.1639.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=38bp
LERRILECPAGLQALVEVLRDPREEARNEVILLLRQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like