prot_H-elongata_contig121144.1624.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig121144.1624.1
Unique Nameprot_H-elongata_contig121144.1624.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length58
Homology
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BLAST of mRNA_H-elongata_contig121144.1624.1 vs. uniprot
Match: D7FM67_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM67_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 2.690e-10
Identity = 36/64 (56.25%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:    1 SFDGDTAVAERPSPNARMHP-------PLQPQQAGSTTLPKLASREDVDRLERLFGSTGGEPLR 57
            SFDGDTAVAERPS N            P  P++A     PK+AS EDV+RL R+FGS GGEPLR
Sbjct:  244 SFDGDTAVAERPSSNLDARQANEGGMRPQAPKEA-----PKMASAEDVERLNRMFGSMGGEPLR 302
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig121144.1624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM67_ECTSI2.690e-1056.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig121144contigH-elongata_contig121144:155..1089 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig121144.1624.1mRNA_H-elongata_contig121144.1624.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig121144 155..1089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig121144.1624.1 ID=prot_H-elongata_contig121144.1624.1|Name=mRNA_H-elongata_contig121144.1624.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
SFDGDTAVAERPSPNARMHPPLQPQQAGSTTLPKLASREDVDRLERLFGS
TGGEPLR*
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