prot_H-elongata_contig120915.1606.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig120915.1606.1
Unique Nameprot_H-elongata_contig120915.1606.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
BLAST of mRNA_H-elongata_contig120915.1606.1 vs. uniprot
Match: A0A6H5JTE4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTE4_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 4.890e-29
Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    1 MDSSHLVLRNRRYTPIIADLKCVLNIEGVPPRFLTMCFSQWIDILRMVHHMTPQIRHVRTHVEHEGRDWMISFNLIISLTSLFE 84
            + +SH VL +RRY PI ADLKCVLNIEGVP RFL  CF++WI +L MV  M PQ+R  R HVE E R+WM +FN+ ISLTSLFE
Sbjct:  636 LSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFTEWIKVLLMVQKMAPQVRQQRLHVEREQREWMFAFNINISLTSLFE 719          
BLAST of mRNA_H-elongata_contig120915.1606.1 vs. uniprot
Match: D7G2M8_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M8_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 4.920e-29
Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    1 MDSSHLVLRNRRYTPIIADLKCVLNIEGVPPRFLTMCFSQWIDILRMVHHMTPQIRHVRTHVEHEGRDWMISFNLIISLTSLFE 84
            + +SH VL +RRY PI ADLKCVLNIEGVP RFL  CF++WI +L MV  M PQ+R  R HVE E R+WM +FN+ ISLTSLFE
Sbjct:  563 LSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFTEWIKVLLMVQKMAPQVRQQRLHVEREQREWMFAFNINISLTSLFE 646          
BLAST of mRNA_H-elongata_contig120915.1606.1 vs. uniprot
Match: A0A7S3DLX1_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DLX1_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 3.540e-16
Identity = 44/91 (48.35%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    1 MDSSHLVLRNRRYTPIIADLKCVLNIEGVPPRFLTMCFS---QWIDILRMVHHMTPQIRHVRT----HVEHEGRDWMISFNLIISLTSLFE 84
            +D +H VL +RRY+P I+DLKCVLN++G+P  F     +    WID L +   M PQ  H RT    HVE E R W+ +FN  ISL SLFE
Sbjct:   14 LDPNHFVLTHRRYSPCISDLKCVLNVKGMPRLFACKGGTFLWDWIDTLSISQQMDPQ--HWRTWNQGHVEDESRGWVGAFNASISLGSLFE 102          
BLAST of mRNA_H-elongata_contig120915.1606.1 vs. uniprot
Match: K8Z3N7_NANGC (Uncharacterized protein (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z3N7_NANGC)

HSP 1 Score: 73.9 bits (180), Expect = 4.980e-15
Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    4 SHLVLRNRRYTPIIADLKCVLNIEGVPPRFLTMCFSQWID-ILRMVHHMTPQIRHVRTHVEHEGRDWMISFNLIISLTSLFE 84
            SH + R+RRY+P++ADLK VLNI GV   F   C   W+  +L  + +M  Q R    HV +E R+WM +FN+ ISL  + +
Sbjct:   35 SHPIFRHRRYSPVVADLKFVLNIPGVSAHFANTCMDVWLSRLLIPLQYMHAQEREADEHVTYESREWMYAFNVQISLCHVLD 116          
BLAST of mRNA_H-elongata_contig120915.1606.1 vs. uniprot
Match: A0A7S1FYU0_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYU0_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.950e-14
Identity = 37/82 (45.12%), Postives = 51/82 (62.20%), Query Frame = 0
Query:    5 HLVLRNRRYTPIIADLKCVLNIEGVPPRFLTMCFSQWIDILRMVHHMTPQ--IRHVRTHVEHEGRDWMISFNLIISLTSLFE 84
            H V+ NRRY+P+I+DLKCVLN+ G+   + + C   W+ +LR    M PQ  I     HV  E + W+ +FN  ISL+SLFE
Sbjct:  253 HPVMTNRRYSPVISDLKCVLNVVGIARVYSSKCLDPWLAVLRRAQEMDPQKWIGLKGIHVIEEPKGWIFAFNAGISLSSLFE 334          
BLAST of mRNA_H-elongata_contig120915.1606.1 vs. uniprot
Match: A0A7S3KZJ0_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KZJ0_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 4.990e-14
Identity = 44/90 (48.89%), Postives = 55/90 (61.11%), Query Frame = 0
Query:    1 MDSSHLVLRNRRYTPIIADLKCVLNIEGVPPRFL----TMCFSQWIDILRMVHHMTPQI-RH-VRTHVEHEGRDWMISFNLIISLTSLFE 84
            +D  H VL +RRY+P I+DLKCVLN++G+P  F     T  F  WI  L +   M PQ  RH  + HVE E R W+ +FN  ISL SLFE
Sbjct:  690 LDPMHFVLTHRRYSPCISDLKCVLNVKGMPRLFGCKGGTFLFD-WIKTLSLAQQMDPQTWRHWTQGHVEDESRGWVGAFNASISLGSLFE 778          
BLAST of mRNA_H-elongata_contig120915.1606.1 vs. uniprot
Match: B7GBX5_PHATC (E3 ubiquitin-protein ligase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GBX5_PHATC)

HSP 1 Score: 73.6 bits (179), Expect = 2.310e-13
Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    1 MDSSHLVLRNRRYTPIIADLKCVLNIEGVPPRFLTM---CFSQWIDILRMVHHMTPQI-RH-VRTHVEHEGRDWMISFNLIISLTSLFE 84
            ++ +H VL +RRY+P I+DLKCVLN++G+P  F          WI++L +   M PQ  RH    HVE E R W+ +FN  ISL S+FE
Sbjct:  637 LNPNHHVLAHRRYSPCISDLKCVLNVKGMPRLFAAKGGTFLGDWIEVLSIAQFMDPQSWRHWTFGHVEDESRGWVGAFNASISLGSIFE 725          
BLAST of mRNA_H-elongata_contig120915.1606.1 vs. uniprot
Match: A0A448Z6T2_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6T2_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 6.050e-13
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    1 MDSSHLVLRNRRYTPIIADLKCVLNIEGVPPRFLT---MCFSQWIDILRMVHHMTPQIRHV--RTHVEHEGRDWMISFNLIISLTSLFE 84
            +D +H V+ NRRY+P I+DLKCVLN++G+P  F +   +  + WI  L +   M  Q+     + HVE E R W+ +FN  ISL SLFE
Sbjct:  761 LDPNHFVMMNRRYSPCISDLKCVLNVKGMPRLFASKSSLFLNDWIAALGLGQMMDSQVWRCWSQGHVEVEHRGWVGAFNASISLGSLFE 849          
BLAST of mRNA_H-elongata_contig120915.1606.1 vs. uniprot
Match: W7U0V5_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0V5_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 6.050e-13
Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    4 SHLVLRNRRYTPIIADLKCVLNIEGVPPRFLTMCFSQWID-ILRMVHHMTPQIRHVRTHVEHEGRDWMISFNLIISLTSLFE 84
            SH + R+RRY+P++ADLK VLNI GV   F   C   W+  +L  + ++  Q R    HV +E R+WM +FN+ ISL  + +
Sbjct:  651 SHPIFRHRRYSPVVADLKFVLNIPGVSAHFANTCMDVWLSRLLIPLQYIHAQEREADEHVTYESREWMYAFNVQISLCHVLD 732          
BLAST of mRNA_H-elongata_contig120915.1606.1 vs. uniprot
Match: A0A1E7FD43_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD43_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.090e-12
Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    1 MDSSHLVLRNRRYTPIIADLKCVLNIEGVPPRFLTM--CF-SQWIDILRMVHHMTPQIRHVRT--HVEHEGRDWMISFNLIISLTSLFE 84
            ++ +H V+ NRRY+P I+DLKCVLN++G+P  F +   CF   WI  L +   M  Q+    T  HVE E R W+ +FN  ISL SLFE
Sbjct:  540 LNPNHFVMMNRRYSPCISDLKCVLNVKGMPRLFASKSGCFLKDWIAALGLGQMMDSQVWRDWTQGHVEVEHRGWVGAFNASISLGSLFE 628          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120915.1606.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JTE4_9PHAE4.890e-2964.29E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
D7G2M8_ECTSI4.920e-2964.29E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A7S3DLX1_9STRA3.540e-1648.35E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amp... [more]
K8Z3N7_NANGC4.980e-1542.68Uncharacterized protein (Fragment) n=2 Tax=Nannoch... [more]
A0A7S1FYU0_9STRA1.950e-1445.12E3 ubiquitin-protein ligase n=1 Tax=Corethron hyst... [more]
A0A7S3KZJ0_9STRA4.990e-1448.89E3 ubiquitin-protein ligase n=1 Tax=Amphora coffei... [more]
B7GBX5_PHATC2.310e-1344.94E3 ubiquitin-protein ligase n=1 Tax=Phaeodactylum ... [more]
A0A448Z6T2_9STRA6.050e-1343.82E3 ubiquitin-protein ligase n=1 Tax=Pseudo-nitzsch... [more]
W7U0V5_9STRA6.050e-1341.46E3 ubiquitin-protein ligase n=2 Tax=Monodopsidacea... [more]
A0A1E7FD43_9STRA1.090e-1246.07E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Fra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig120915contigH-elongata_contig120915:625..1107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig120915.1606.1mRNA_H-elongata_contig120915.1606.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig120915 625..1107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig120915.1606.1 ID=prot_H-elongata_contig120915.1606.1|Name=mRNA_H-elongata_contig120915.1606.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
MDSSHLVLRNRRYTPIIADLKCVLNIEGVPPRFLTMCFSQWIDILRMVHH
MTPQIRHVRTHVEHEGRDWMISFNLIISLTSLFE*
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