prot_H-elongata_contig11967.1516.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11967.1516.1
Unique Nameprot_H-elongata_contig11967.1516.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length401
Homology
BLAST of mRNA_H-elongata_contig11967.1516.1 vs. uniprot
Match: D8LNZ1_ECTSI (PDCD2_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ1_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 3.330e-84
Identity = 161/292 (55.14%), Postives = 187/292 (64.04%), Query Frame = 0
Query:  123 RHCFPAKFMSFFPEPWDPKGSGIDN-DMEERIRRYREQEEDRGLVVELDKALRW-GASNVLNRHVNSGRVRVAAVGEKYERTPARAKAVMRFAERVARSPQQVVRYAYGGEPLWSASDPPHEVIPPCEGCGTARVFEMQLMPALLLQLRVDEFAERETPKMTCAGTGDTSVCGVIGDSTAAEAGGREEDING-----SSLVTVKDKGLSHAPIKGEDPNDFGQDQDDYIT-------RKDYNGSPAIMPTPSAEDRERLKTWGMDWGVVAVWSCPKSCKGSCEEFVVVQLPV 400
            R CFPAK +SF PEPW  + S  D+ DME R+RRYREQEEDRGLV  LD AL    A  + + H       VA+VGEKYERTPARAKAVMRFA+RVARSPQQVVRYAYGGEPLWSASDPP E IPPC  CG  RVFEMQLMPALLLQL+V++ AERET  +        S       ST ++     ++ N       S V V+ KG   A  +  D +   Q     +         +D      +MPTPS E+RERL+T GMDWGVVA+WSCP+SC  SCEE VVVQLPV
Sbjct:  244 RPCFPAKTVSFVPEPWGAESSRTDDKDMENRLRRYREQEEDRGLVAALDHALGLKDAGGLSSEHGGKEGKAVASVGEKYERTPARAKAVMRFADRVARSPQQVVRYAYGGEPLWSASDPPREEIPPC-ACGATRVFEMQLMPALLLQLQVNDLAERETGSLEGGSPATFSGLESKKISTLSQVADGHDNNNTLKSITPSAVAVQPKGA--ASTRSTDEHGVAQGDGSGVLAGIGVSGEEDEGNETTMMPTPSVEERERLRTLGMDWGVVAIWSCPRSCSISCEECVVVQLPV 532          
BLAST of mRNA_H-elongata_contig11967.1516.1 vs. uniprot
Match: A0A8K1CFZ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFZ9_PYTOL)

HSP 1 Score: 99.4 bits (246), Expect = 3.850e-19
Identity = 84/273 (30.77%), Postives = 111/273 (40.66%), Query Frame = 0
Query:  126 FPAKFMSFFPEPWDPKGSGIDNDME-ERIRRYREQEEDRGLVVELDKALRWGASNVLNRHVNSGRVRVAAVGEKYERTPARAKAVMRFAERVARSPQQVVRYAYGGEPLWSASDPPHEVIPPCEGCGTARVFEMQLMPALLLQLRVDEFAERETPKMTCAGTGDTSVCGVIGDSTAAEAGGREEDINGSSLVTVKDKGLSHAPIKGEDPNDFGQDQDDYITRKDYNGSPAIMPTPSAEDRERLKTWGMDWGVVAVWSCPKSCKGSCEEFVVVQ 397
            FP+ ++    EP+       D   E E ++ Y  QEE+     +++   R  AS               + GE YERTPA+ K  MRF +R++R P QV+RY YGGEPLW A    +  +P C  CG  R FE QL P +   L+VDEFA ++                                              +HA  K                + D +  PA  PT S          GMDW  V V+SCPKSC+ S EEF  VQ
Sbjct:  241 FPSLYIDVIDEPFVDYAKENDFSHENELLQEYMRQEEEEK-SNDVNDLRRIIASXXXXXXXXXXXXXXXSSGESYERTPAQQKHFMRFQKRISRCPLQVLRYDYGGEPLWPAPPARNLKVPRCP-CGEERAFEFQLTPTINYFLKVDEFAAKKLE--------------------------------------------AHAVPK----------------KSDSDAPPASAPTQSGG--------GMDWASVVVYSCPKSCQQSREEFAYVQ 443          
BLAST of mRNA_H-elongata_contig11967.1516.1 vs. uniprot
Match: A0A2D4BDN7_PYTIN (PDCD2_C domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDN7_PYTIN)

HSP 1 Score: 92.4 bits (228), Expect = 1.880e-17
Identity = 63/154 (40.91%), Postives = 85/154 (55.19%), Query Frame = 0
Query:  126 FPAKFMSFFPEPWDPKGSGIDNDME-ERIRRY-REQEEDRGLVVELDKALRWGASNVLNRHVNSGRVRVAAVGEKYERTPARAKAVMRFAERVARSPQQVVRYAYGGEPLWSASDPPHEVIPPCEGCGTARVFEMQLMPALLLQLRVDEFAERE 277
            FPA F+    EP++   +  D   E E +++Y R++EED+   V     LR   +N      +      A+ GE YERTPA+ K  MRF +R+ R P QV+RY YGGEPLW    P    IP C  CG  R FE+QL P +   L+VDEFA ++
Sbjct:   98 FPALFIDVIDEPYEDFKTESDYSHENELLQQYMRQEEEDKSTDV---NDLRRIIANAKKSDGSVSGSAAASSGESYERTPAQQKHFMRFQKRINRCPLQVLRYDYGGEPLWPTPMPRGLKIPRC-ACGEERAFELQLTPTINYFLKVDEFAAKQ 247          
BLAST of mRNA_H-elongata_contig11967.1516.1 vs. uniprot
Match: A0A7S4IB63_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IB63_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.110e-17
Identity = 75/220 (34.09%), Postives = 92/220 (41.82%), Query Frame = 0
Query:  197 EKYERTPARAKAVMRFAERVARSPQQVVRYAYGGEPLWSAS--DPPHEV-----------------IPPCEGCGTARVFEMQLMPALLLQLRVDEFAERETPKMTCAGTGDTSVCGVIGDSTAAEAGGREEDINGSSLVTVKDKGLSHAPIKGEDPNDFGQDQDDYITRKDYNGSPAIMPTPSAEDRERLKTWGMDWGVVAVWSCPKSCKGSCEEFVVVQ 397
            EKYER P   +A + F ER+ R+P+QVVRYAYGG PLWS     PP +                  +PPC GCG+ R FEMQL PALLL L VD  A   T               +    +A E  GREE+  G S              +G D    G                                 GM+WG +AV+ CP SC GS  E +V+Q
Sbjct:  160 EKYERLPPDQRAFLTFTERMRRAPRQVVRYAYGGVPLWSVPTPSPPSKKEKRNRGRKSARRTQFPSVPPCTGCGSERTFEMQLAPALLLALDVDGHALLPT---------------LASSVSAGEGEGREEE--GGS--------------RGVDGGGEG---------------------------------GMNWGSIAVYCCPLSCDGSRGEALVMQ 315          
BLAST of mRNA_H-elongata_contig11967.1516.1 vs. uniprot
Match: L1J492_GUITC (PDCD2_C domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J492_GUITC)

HSP 1 Score: 84.3 bits (207), Expect = 7.700e-15
Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 0
Query:  196 GEKYERTPARAKAVMRFAERVARSPQQVVRYAYGGEPLWSASDPPHEVIPPCEGCGTARVFEMQLMPALLLQLRVDEFAERETPKMTCAGTGDTSVCGVIGDSTAAEAGGREED 309
            GE++E T    K   +F +RVAR+P+QV+RY + GEPLW +S+     +PPC  CG++RV+EMQ MP L  +L V+ FA +    M C      S     G S  A+  G  ED
Sbjct:  142 GEEHESTKGD-KQFRKFRKRVARAPEQVLRYCWNGEPLWQSSEAQCTEVPPCPRCGSSRVYEMQAMPGLFYELGVEAFAPKGDEGMDCGVAIIYSCSSSCGSSGQADGDGSGED 254          
BLAST of mRNA_H-elongata_contig11967.1516.1 vs. uniprot
Match: A0A7S4PFU5_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PFU5_GUITH)

HSP 1 Score: 81.3 bits (199), Expect = 1.100e-14
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 0
Query:  196 GEKYERTPARAKAVMRFAERVARSPQQVVRYAYGGEPLWSASDPPHEVIPPCEGCGTARVFEMQLMPALLLQLRVDEFAERETPKMTC 283
            GE++E T    K   +F +RVAR+P+QV+RY + GEPLW +S+     +PPC  CG++RV+EMQ MP L  +L V+ FA +    M C
Sbjct:   69 GEEHESTKGD-KQFRKFRKRVARAPEQVLRYCWNGEPLWQSSEAQCTEVPPCPRCGSSRVYEMQAMPGLFYELGVEAFAPKGDEAMDC 155          
BLAST of mRNA_H-elongata_contig11967.1516.1 vs. uniprot
Match: A0A7S4PEL0_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PEL0_GUITH)

HSP 1 Score: 81.3 bits (199), Expect = 3.460e-13
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 0
Query:  196 GEKYERTPARAKAVMRFAERVARSPQQVVRYAYGGEPLWSASDPPHEVIPPCEGCGTARVFEMQLMPALLLQLRVDEFAERETPKMTC 283
            GE++E T    K   +F +RVAR+P+QV+RY + GEPLW +S+     +PPC  CG++RV+EMQ MP L  +L V+ FA +    M C
Sbjct:  305 GEEHESTKGD-KQFRKFRKRVARAPEQVLRYCWNGEPLWQSSEAQCTEVPPCPRCGSSRVYEMQAMPGLFYELGVEAFAPKGDEAMDC 391          
BLAST of mRNA_H-elongata_contig11967.1516.1 vs. uniprot
Match: A0A6G0XPA3_9STRA (PDCD2_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPA3_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.500e-12
Identity = 42/80 (52.50%), Postives = 52/80 (65.00%), Query Frame = 0
Query:  197 EKYERTPARAKAVMRFAERVARSPQQVVRYAYGGEPLWSASDPPHEVIPPCEGCGTARVFEMQLMPALLLQLRVDEFAER 276
            E YERTP R K  +RF +R+ RSP Q +RY YGGEPLW  S PP   IP C  CG  R+FEMQL+P     L+V+ + E+
Sbjct:  261 ESYERTPLREKLFLRFQKRIKRSPNQCLRYNYGGEPLWP-SPPPQLEIPKCP-CGEPRMFEMQLIPTTNYFLKVENYIEK 338          
BLAST of mRNA_H-elongata_contig11967.1516.1 vs. uniprot
Match: A0A7S2W406_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W406_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 6.180e-12
Identity = 74/268 (27.61%), Postives = 108/268 (40.30%), Query Frame = 0
Query:  153 IRRYREQEEDRGLVVELDKALRWGASNVLNRHVNSGRVRVAAVGEKYERTPARAKAVMRFAERVARSPQQVVRYAYGGEPLWS------ASDPPHEV-----------------IPPCEGCGTARVFEMQLMPALLLQLRVDEFAERETPKMTCAGTGDTSVCGVIGDSTAAEAGGREEDINGSSLVTVKDKGLSHAPIKGEDPNDFGQDQDDYITRKDYNGSPAIMPTPSAEDRERLKTWGMDWGVVAVWSCPKSCKGSCEEFVVVQ 397
            I +Y ++EED  LV  L            N+  +S  +   A  EKYE+ P +  A   F  R+ R+P QV RYAYGG P+WS       + P  +V                 IP C  CG+ R FE Q+MP+ L  L VD+                                   +  N  +  TV D+ ++      E+ N+  ++  +++   + NG                   GM+WGV+AV+SC  SC    EE+VVVQ
Sbjct:    9 ISKYLKEEEDEELVGMLKNDDGRNNCKYNNKASSSNNISGGADTEKYEKLPPQELAFQLFTNRLKRAPYQVARYAYGGIPIWSIPTSLLTTTPSKQVKNKKGQSRRDMISSFPSIPLCP-CGSKREFEFQIMPSALHVLGVDD-----------------------------------KQYNIPTTSTVTDESIN------ENDNNINKNSIEWML-SNSNG-------------------GMNWGVIAVYSCASSCNEYREEYVVVQ 214          
BLAST of mRNA_H-elongata_contig11967.1516.1 vs. uniprot
Match: A0A485L176_9STRA (Aste57867_13990 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L176_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 6.630e-12
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 0
Query:  197 EKYERTPARAKAVMRFAERVARSPQQVVRYAYGGEPLWSASDPPHEVIPPCEGCGTARVFEMQLMPALLLQLRVDEFAE 275
            E YERTP R K  ++F +R+ RSP Q +RY YGG+PLW  S PP  V+P C  CG  R FEMQLMP     L+V+ + +
Sbjct:  261 ESYERTPLREKLFLKFQKRIKRSPNQCLRYNYGGQPLWP-SPPPKLVVPNCT-CGEPRTFEMQLMPMTNYFLKVENYVQ 337          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11967.1516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNZ1_ECTSI3.330e-8455.14PDCD2_C domain-containing protein n=2 Tax=Ectocarp... [more]
A0A8K1CFZ9_PYTOL3.850e-1930.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BDN7_PYTIN1.880e-1740.91PDCD2_C domain-containing protein n=1 Tax=Pythium ... [more]
A0A7S4IB63_9STRA2.110e-1734.09Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
L1J492_GUITC7.700e-1541.23PDCD2_C domain-containing protein n=1 Tax=Guillard... [more]
A0A7S4PFU5_GUITH1.100e-1445.45Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S4PEL0_GUITH3.460e-1345.45Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A6G0XPA3_9STRA1.500e-1252.50PDCD2_C domain-containing protein n=1 Tax=Aphanomy... [more]
A0A7S2W406_9STRA6.180e-1227.61Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A485L176_9STRA6.630e-1250.63Aste57867_13990 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007320Programmed cell death protein 2, C-terminalPFAMPF04194PDCD2_Ccoord: 192..397
e-value: 9.9E-30
score: 103.9
NoneNo IPR availablePANTHERPTHR46421FAMILY NOT NAMEDcoord: 18..397
NoneNo IPR availablePANTHERPTHR46421:SF1PROGRAMMED CELL DEATH PROTEIN 2-LIKEcoord: 18..397

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11967contigH-elongata_contig11967:6043..7813 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11967.1516.1mRNA_H-elongata_contig11967.1516.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11967 4496..7901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11967.1516.1 ID=prot_H-elongata_contig11967.1516.1|Name=mRNA_H-elongata_contig11967.1516.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=401bp
MAEPPVPSTPTMSINPATDAWGADTGTWDDVVGGDEWGAGAGGWECEALL
ESCGGSKGEATAATIEALLKERDNRFAEMHSKRAGRLTTLACRKPAATAA
RGDRNVEIIARHVVDADNRRSMRHCFPAKFMSFFPEPWDPKGSGIDNDME
ERIRRYREQEEDRGLVVELDKALRWGASNVLNRHVNSGRVRVAAVGEKYE
RTPARAKAVMRFAERVARSPQQVVRYAYGGEPLWSASDPPHEVIPPCEGC
GTARVFEMQLMPALLLQLRVDEFAERETPKMTCAGTGDTSVCGVIGDSTA
AEAGGREEDINGSSLVTVKDKGLSHAPIKGEDPNDFGQDQDDYITRKDYN
GSPAIMPTPSAEDRERLKTWGMDWGVVAVWSCPKSCKGSCEEFVVVQLPV
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007320PDCD2_C