prot_H-elongata_contig119572.1508.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig119572.1508.1
Unique Name	prot_H-elongata_contig119572.1508.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	111

Homology

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BLAST of mRNA_H-elongata_contig119572.1508.1 vs. uniprot
Match: A0A8F0JZL8_9PHAE (Uncharacterized protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZL8_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 5.880e-67
Identity = 102/109 (93.58%), Postives = 106/109 (97.25%), Query Frame = 0

Query:    1 KTYYFALASNDFLFFEEPIEEILRERYQYYKRINLPLDFWLIRSPKFLQTLEMEELRNKLDPSKSYSAIVSTDEIFIRWLKLRLLNVATGKFSGPTSAIPSPLGSSCDN 109
            KTYYF LASNDFLF EEPIEEILRERYQYYKRINLPLDFWLIRSPKFLQTLEM+ELRNKLD SKSYSAIVSTDEIF+RWLKLRLLNVATGKF+GPTSAIPSPLGSSCD+
Sbjct:   58 KTYYFVLASNDFLFSEEPIEEILRERYQYYKRINLPLDFWLIRSPKFLQTLEMQELRNKLDSSKSYSAIVSTDEIFVRWLKLRLLNVATGKFAGPTSAIPSPLGSSCDD 166

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BLAST of mRNA_H-elongata_contig119572.1508.1 vs. uniprot
Match: A0A8F0JXV7_9PHAE (Uncharacterized protein n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0JXV7_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.310e-33
Identity = 60/104 (57.69%), Postives = 76/104 (73.08%), Query Frame = 0

Query:    2 TYYFALASNDFLFFEEPIEEILRERYQYYKRINLPLDFWLIRSPKFLQTLEMEELRNKLDPSKSYSAIVSTDEIFIRWLKLRLLNVATGKFSGPTSAIPSPLGS 105
            TY+F +ASNDFL   EP+EEILRER Q+Y+R+   +DFW ++SPKFL++ ++  L+ KL  SK  SAIVS D+ F+ WLKLRL NVA G FS PT  I SPL S
Sbjct:    9 TYHFIVASNDFLLVAEPVEEILRERVQHYRRVKKTIDFWFVKSPKFLESTQLTNLQTKL--SKDSSAIVSLDKSFVTWLKLRLNNVAVGSFSAPTEDITSPLAS 110

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BLAST of mRNA_H-elongata_contig119572.1508.1 vs. uniprot
Match: A0A516ICN5_9PHAE (Ycf54 n=7 Tax=Laminariales TaxID=2886 RepID=A0A516ICN5_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 5.720e-33
Identity = 60/107 (56.07%), Postives = 79/107 (73.83%), Query Frame = 0

Query:    2 TYYFALASNDFLFFEEPIEEILRERYQYYKRINLPLDFWLIRSPKFLQTLEMEELRNKLDPSK---SYSAIVSTDEIFIRWLKLRLLNVATGKFSGPTSAIPSPLGS 105
            TYYF +ASN+FL   EP+EEILRER Q+Y+R+   +DFWL++SPKFL+++++ +L+ KL  ++     SAIVS D+ FI WLKLRL NVA G FS PT  I SPL S
Sbjct:    9 TYYFIVASNEFLLVTEPVEEILRERVQHYRRVKKNIDFWLVQSPKFLESVQLIDLQTKLTQARIANQCSAIVSVDKTFITWLKLRLNNVAIGSFSAPTGDIKSPLAS 115

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BLAST of mRNA_H-elongata_contig119572.1508.1 vs. uniprot
Match: A0A8F0JZN3_9PHAE (Uncharacterized protein n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JZN3_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 8.090e-33
Identity = 62/104 (59.62%), Postives = 76/104 (73.08%), Query Frame = 0

Query:    2 TYYFALASNDFLFFEEPIEEILRERYQYYKRINLPLDFWLIRSPKFLQTLEMEELRNKLDPSKSYSAIVSTDEIFIRWLKLRLLNVATGKFSGPTSAIPSPLGS 105
            TYYF LAS+DFL   EP+EEILRER Q+Y+RI    +FWLIRSPKF+++ ++ +LR K+  SK  SA+VS D+ FI WLKLRL NVA G F  PT  I SPL S
Sbjct:    9 TYYFILASSDFLLVTEPVEEILRERVQHYRRIKKSTNFWLIRSPKFMESNQLVDLRGKV--SKDCSAVVSLDKSFITWLKLRLNNVAVGSFVAPTDDITSPLAS 110

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BLAST of mRNA_H-elongata_contig119572.1508.1 vs. uniprot
Match: A0A8F0FBA1_9PHAE (Uncharacterized protein n=10 Tax=Laminariales TaxID=2886 RepID=A0A8F0FBA1_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 1.630e-32
Identity = 59/107 (55.14%), Postives = 79/107 (73.83%), Query Frame = 0

Query:    2 TYYFALASNDFLFFEEPIEEILRERYQYYKRINLPLDFWLIRSPKFLQTLEMEELRNKLDPSK---SYSAIVSTDEIFIRWLKLRLLNVATGKFSGPTSAIPSPLGS 105
            TYYF +AS+DFL   EP+EEILRER Q+Y+R+   +DFWL++SPKFL+++++ +L+ KL  ++     SAIVS D+ FI WLKLRL NVA G F+ PT  I SPL S
Sbjct:    9 TYYFIVASSDFLLVAEPVEEILRERVQHYRRVKKNIDFWLVQSPKFLESVQLTDLQTKLRQARIANECSAIVSVDKTFITWLKLRLNNVAMGSFTAPTGDITSPLAS 115

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BLAST of mRNA_H-elongata_contig119572.1508.1 vs. uniprot
Match: A0A8F0FB57_COSCS (Uncharacterized protein n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0FB57_COSCS)

HSP 1 Score: 116 bits (290), Expect = 2.530e-31
Identity = 58/107 (54.21%), Postives = 77/107 (71.96%), Query Frame = 0

Query:    2 TYYFALASNDFLFFEEPIEEILRERYQYYKRINLPLDFWLIRSPKFLQTLEMEELRNKLDPSK---SYSAIVSTDEIFIRWLKLRLLNVATGKFSGPTSAIPSPLGS 105
            TYYF +AS++FL   EP+EEILRER Q+Y+R+   +DFWL++SPKFL ++++ +L+ KL  ++     SAIVS D+ FI WLKLRL NVA G F  PT  I SPL S
Sbjct:    9 TYYFIVASSEFLLVAEPVEEILRERVQHYRRMKKNIDFWLVQSPKFLDSVQLTDLQTKLTQARIADECSAIVSVDKTFITWLKLRLNNVAMGSFKAPTGDITSPLAS 115

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BLAST of mRNA_H-elongata_contig119572.1508.1 vs. uniprot
Match: A0A8E6D4X3_9PHAE (Uncharacterized protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D4X3_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 6.820e-31
Identity = 59/101 (58.42%), Postives = 72/101 (71.29%), Query Frame = 0

Query:    3 YYFALASNDFLFFEEPIEEILRERYQYYKRINLPLDFWLIRSPKFLQTLEMEELRNKLDPSKSYSAIVSTDEIFIRWLKLRLLNVATGKFSGPTSAIPSPL 103
            YYF  ASN FL   EP+EEILRER Q+YKRI  P+DFWL+RSP FLQ+ +M+E ++ L  +    AIVST + FI WLKLRL +VA G+F  PT  IP PL
Sbjct:   18 YYFVAASNKFLLLSEPLEEILRERVQHYKRIKKPIDFWLLRSPAFLQSEQMKEFKDSL--ANDCCAIVSTQQSFIVWLKLRLNHVAKGEFFAPTLDIPKPL 116

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BLAST of mRNA_H-elongata_contig119572.1508.1 vs. uniprot
Match: A0A1C9CH76_PALPL (Uncharacterized protein n=3 Tax=Palmaria TaxID=2821 RepID=A0A1C9CH76_PALPL)

HSP 1 Score: 110 bits (275), Expect = 2.850e-29
Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 0

Query:    2 TYYFALASNDFLFFEEPIEEILRERYQYYKRINLPLDFWLIRSPKFLQTLEMEELRNKLDPSKSYSAIVSTDEIFIRWLKLRLLNVATGKFSGPTSAIPSPLG 104
            TYYFA+AS DFL  EEPIEEILRER  +YK IN  +DFWLI +P F+   EM  ++ +L+  K   AIVS + +FI WLKLRL  V+TG F  P+++IP PLG
Sbjct:    3 TYYFAIASQDFLLKEEPIEEILRERINHYKSINKVIDFWLIVNPIFINAPEMSIIKKQLN--KPSVAIVSKNPVFITWLKLRLGFVSTGNFCAPSTSIPDPLG 103

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BLAST of mRNA_H-elongata_contig119572.1508.1 vs. uniprot
Match: A0A3G3MHP9_9FLOR (Uncharacterized protein n=1 Tax=Renouxia sp. TaxID=2485823 RepID=A0A3G3MHP9_9FLOR)

HSP 1 Score: 108 bits (270), Expect = 1.890e-28
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 0

Query:    2 TYYFALASNDFLFFEEPIEEILRERYQYYKRINLPLDFWLIRSPKFLQTLEMEELRNKLDPSKSYSAIVSTDEIFIRWLKLRLLNVATGKFSGPTSAIPSPLGSS 106
            TYYFA+AS DFL  EEPIEEILRER  +YK  N  +DFW +  P FL    M ++R++L   K  +A+VS +  FI+WLKLRL+ V TG F  P+  IP+PLG S
Sbjct:    3 TYYFAVASQDFLLSEEPIEEILRERTNHYKSFNKRIDFWFVTDPLFLDASSMSQIRDQL--LKPSAAVVSLNPKFIQWLKLRLVFVITGNFQAPSIEIPNPLGPS 105

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BLAST of mRNA_H-elongata_contig119572.1508.1 vs. uniprot
Match: A0A1Z3HG94_9CYAN (Ycf54 protein n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HG94_9CYAN)

HSP 1 Score: 107 bits (267), Expect = 5.110e-28
Identity = 56/106 (52.83%), Postives = 74/106 (69.81%), Query Frame = 0

Query:    1 KTYYFALASNDFLFFEEPIEEILRERYQYYKRINLPLDFWLIRSPKFLQTLEMEELR-NKLDPSKSYSAIVSTDEIFIRWLKLRLLNVATGKFSGPTSAIPSPLGS 105
            +TYY+A+AS  FL  EEP++E+LRER ++Y+  N P+DFWLI+ P FLQ  E+ E+R N   P+   +AIVST++ FI WLKLRL  VA G F  P+  IP PL S
Sbjct:    2 QTYYYAIASQRFLIEEEPLDEVLRERTRHYQEQNRPIDFWLIKQPAFLQAPELAEVRANCPQPA---AAIVSTNQSFITWLKLRLEYVAVGSFEAPSDTIPEPLAS 104

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig119572.1508.1 vs. uniprot

BLAST of mRNA_H-elongata_contig119572.1508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A8F0JZL8_9PHAE	5.880e-67	93.58	Uncharacterized protein n=1 Tax=Desmarestia aculea...	[more]
A0A8F0JXV7_9PHAE	2.310e-33	57.69	Uncharacterized protein n=2 Tax=Laminariales TaxID...	[more]
A0A516ICN5_9PHAE	5.720e-33	56.07	Ycf54 n=7 Tax=Laminariales TaxID=2886 RepID=A0A516...	[more]
A0A8F0JZN3_9PHAE	8.090e-33	59.62	Uncharacterized protein n=1 Tax=Chorda asiatica Ta...	[more]
A0A8F0FBA1_9PHAE	1.630e-32	55.14	Uncharacterized protein n=10 Tax=Laminariales TaxI...	[more]
A0A8F0FB57_COSCS	2.530e-31	54.21	Uncharacterized protein n=2 Tax=Laminariales TaxID...	[more]
A0A8E6D4X3_9PHAE	6.820e-31	58.42	Uncharacterized protein n=1 Tax=Ishige okamurae Ta...	[more]
A0A1C9CH76_PALPL	2.850e-29	56.31	Uncharacterized protein n=3 Tax=Palmaria TaxID=282...	[more]
A0A3G3MHP9_9FLOR	1.890e-28	53.33	Uncharacterized protein n=1 Tax=Renouxia sp. TaxID...	[more]
A0A1Z3HG94_9CYAN	5.110e-28	52.83	Ycf54 protein n=1 Tax=Halomicronema hongdechloris ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019616	Uncharacterised protein family Ycf54	PFAM	PF10674	Ycf54	coord: 1..93 e-value: 2.5E-30 score: 104.6
IPR019616	Uncharacterised protein family Ycf54	PANTHER	PTHR35319	FAMILY NOT NAMED	coord: 1..95
IPR038409	Ycf54-like superfamily	GENE3D	3.30.70.1860		coord: 1..110 e-value: 1.8E-37 score: 129.8

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig119572	contig	H-elongata_contig119572:1273..1605 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig119572.1508.1	mRNA_H-elongata_contig119572.1508.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig119572 1273..1605 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig119572.1508.1 ID=prot_H-elongata_contig119572.1508.1|Name=mRNA_H-elongata_contig119572.1508.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp
KTYYFALASNDFLFFEEPIEEILRERYQYYKRINLPLDFWLIRSPKFLQT
LEMEELRNKLDPSKSYSAIVSTDEIFIRWLKLRLLNVATGKFSGPTSAIP
SPLGSSCDNT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019616	Uncharacterised_Ycf54
IPR038409	Ycf54-like_sf