prot_H-elongata_contig119506.1503.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig119506.1503.1
Unique Name	prot_H-elongata_contig119506.1503.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	97

Homology

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BLAST of mRNA_H-elongata_contig119506.1503.1 vs. uniprot
Match: A0A6H5KVK0_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK0_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 7.280e-25
Identity = 50/105 (47.62%), Postives = 66/105 (62.86%), Query Frame = 0

Query:    1 MYNGHKRCHAFKFQETVKPDGVIVSLYGPVED---------RSGLGQLMQEHMNIDGQAYQVYGDPAYGLSQHIFTPYNATNAVDLTLQMCEFNKRMSSCRVSVE 96
             YNGHKR HA KFQ  + PDG+ V L+GPV           +SGL + +    +  G  Y +YGDPAYGLS H+  P++A++   LT +M +FNKRMS CRV+VE
Sbjct:   11 FYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVE 115

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BLAST of mRNA_H-elongata_contig119506.1503.1 vs. uniprot
Match: A0A6H5KY46_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY46_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.280e-24
Identity = 50/105 (47.62%), Postives = 66/105 (62.86%), Query Frame = 0

Query:    1 MYNGHKRCHAFKFQETVKPDGVIVSLYGPVED---------RSGLGQLMQEHMNIDGQAYQVYGDPAYGLSQHIFTPYNATNAVDLTLQMCEFNKRMSSCRVSVE 96
             YNGHKR HA KFQ  + PDG+ V L+GPV           + GL + +    +  G  Y +YGDPAYGLS H+  P++A++A  LT +M +FNKRMS CRV+VE
Sbjct:   60 FYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHHSFILAQFGLMEKLSMQNSPIGHPYYLYGDPAYGLSNHLVCPFSASSAGPLTPEMADFNKRMSHCRVTVE 164

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BLAST of mRNA_H-elongata_contig119506.1503.1 vs. uniprot
Match: A0A6H5KB08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB08_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.120e-23
Identity = 50/105 (47.62%), Postives = 66/105 (62.86%), Query Frame = 0

Query:    1 MYNGHKRCHAFKFQETVKPDGVIVSLYGPVED---------RSGLGQLMQEHMNIDGQAYQVYGDPAYGLSQHIFTPYNATNAVDLTLQMCEFNKRMSSCRVSVE 96
             YNGHKR HA KFQ  + PDG+ V L+GPV           +SGL + +    +  G  Y +YGDPAYGLS H+  P++A++   LT +M +FNKRMS CRV+VE
Sbjct:  160 FYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVE 264

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BLAST of mRNA_H-elongata_contig119506.1503.1 vs. uniprot
Match: D8LL85_ECTSI (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LL85_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 5.590e-23
Identity = 51/105 (48.57%), Postives = 66/105 (62.86%), Query Frame = 0

Query:    2 YNGHKRCHAFKFQETVKPDGVIVSLYGPVED---------RSGLGQLMQEHMNI-DGQAYQVYGDPAYGLSQHIFTPYNATNAVDLTLQMCEFNKRMSSCRVSVE 96
            YNGHKR HA KFQ  + PDG+ V ++GPV           +SGL Q +  H N   G  Y +YGDPAYGLS H+  P++A++   LT  M +FN+RMS CRV+VE
Sbjct:  180 YNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHSNSPSGHPYCLYGDPAYGLSDHLACPFSASSHGPLTPDMADFNQRMSHCRVAVE 284

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BLAST of mRNA_H-elongata_contig119506.1503.1 vs. uniprot
Match: A0A6H5KLS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLS3_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 5.960e-22
Identity = 49/105 (46.67%), Postives = 66/105 (62.86%), Query Frame = 0

Query:    1 MYNGHKRCHAFKFQETVKPDGVIVSLYGPVED---------RSGLGQLMQEHMNIDGQAYQVYGDPAYGLSQHIFTPYNATNAVDLTLQMCEFNKRMSSCRVSVE 96
             YN HK  HAFKFQ  V PDG+   L+GPV           +SGL Q +    +  GQ Y +YGDPAYGLS H+  P++A++   LT ++ +FNKR+S+CRV+VE
Sbjct:  527 FYNDHKGKHAFKFQGVVTPDGLFADLWGPVVGTRHDNYILAQSGLMQKLAMLNSPSGQPYYLYGDPAYGLSNHLICPFSASSVGPLTPEVADFNKRISACRVTVE 631

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BLAST of mRNA_H-elongata_contig119506.1503.1 vs. uniprot
Match: A0A6H5K0J0_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J0_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 7.320e-22
Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = 0

Query:    1 MYNGHKRCHAFKFQETVKPDGVIVSLYGPVED---------RSGLGQLMQEHMNIDGQAYQVYGDPAYGLSQHIFTPYNATNAVDLTLQMCEFNKRMSSCRVSVE 96
             YNGHKR HA KFQ  + PDG+ V L+GPV           +SGL + +    +  G  Y +YGDPAYGL  H+  P++A++    T +M +FNKR S CRV+VE
Sbjct:   90 FYNGHKRKHAMKFQGIITPDGLFVDLWGPVAGTRHDSFMLAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLRNHLVCPFSASSVGPFTPEMADFNKRTSHCRVTVE 194

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BLAST of mRNA_H-elongata_contig119506.1503.1 vs. uniprot
Match: A0A7D9JJC4_PARCT (DDE Tnp4 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JJC4_PARCT)

HSP 1 Score: 92.0 bits (227), Expect = 2.100e-21
Identity = 52/106 (49.06%), Postives = 60/106 (56.60%), Query Frame = 0

Query:    1 MYNGHKRCHAFKFQETVKPDGVIVSLYGPVEDR---------SGL-GQLMQEHMNIDGQAYQVYGDPAYGLSQHIFTPYNATNAVDLTLQMCEFNKRMSSCRVSVE 96
            +YNGHK  HA KFQ    P+G+I +LYGPVE R         SGL G L     N DGQ   +YGDPAY L   +  PY   +   LT  M EFN+ MSS RVSVE
Sbjct:    5 VYNGHKHVHALKFQSVALPNGLIANLYGPVEGRRHDAGMLKDSGLLGSLELHAHNPDGQLLCLYGDPAYPLCPQLMAPYRVGDVQVLTEDMKEFNRAMSSLRVSVE 110

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BLAST of mRNA_H-elongata_contig119506.1503.1 vs. uniprot
Match: A0A6S7JPM4_PARCT (DDE Tnp4 domain-containing protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JPM4_PARCT)

HSP 1 Score: 94.0 bits (232), Expect = 9.320e-21
Identity = 53/106 (50.00%), Postives = 61/106 (57.55%), Query Frame = 0

Query:    1 MYNGHKRCHAFKFQETVKPDGVIVSLYGPVEDR---------SGL-GQLMQEHMNIDGQAYQVYGDPAYGLSQHIFTPYNATNAVDLTLQMCEFNKRMSSCRVSVE 96
            +YNGHKR HA KFQ    P+G+I +LYGPVE R         SGL G L     N DGQ   +YGDPAY L   +  PY   +   LT  M EFN+ MSS RVSVE
Sbjct:  191 VYNGHKRVHALKFQSVALPNGLIANLYGPVEGRRHDAGMLKDSGLLGSLELHAHNPDGQLLCLYGDPAYPLRPQLMAPYRVGDVQVLTEDMKEFNRAMSSLRVSVE 296

[Close]

BLAST of mRNA_H-elongata_contig119506.1503.1 vs. uniprot
Match: A0A6G0XLE7_9STRA (DDE Tnp4 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XLE7_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.560e-20
Identity = 48/104 (46.15%), Postives = 58/104 (55.77%), Query Frame = 0

Query:    2 YNGHKRCHAFKFQETVKPDGVIVSLYGPVEDR---------SGLGQLMQEHMNIDGQAYQVYGDPAYGLSQHIFTPYNATNAVDLTLQMCEFNKRMSSCRVSVE 96
            YNGHKR HA KFQ    PDG+I+ L GP   R         S L + + +HM +    + +YGDPAYGL  HI +P+   N   LT     FNKRMS  RVSVE
Sbjct:   97 YNGHKRVHALKFQSVSAPDGMIIHLSGPYVGRRHDTRMLRESKLSEALSKHMRLGDSTFVIYGDPAYGLENHIISPFRGAN---LTKPQELFNKRMSRVRVSVE 197

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BLAST of mRNA_H-elongata_contig119506.1503.1 vs. uniprot
Match: A0A7D9LRU2_PARCT (DDE Tnp4 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LRU2_PARCT)

HSP 1 Score: 91.3 bits (225), Expect = 5.370e-20
Identity = 50/106 (47.17%), Postives = 62/106 (58.49%), Query Frame = 0

Query:    1 MYNGHKRCHAFKFQETVKPDGVIVSLYGPVEDR---------SGLGQLMQEHMNID-GQAYQVYGDPAYGLSQHIFTPYNATNAVDLTLQMCEFNKRMSSCRVSVE 96
            MYNGHKR HA KFQ  V P+G+I +LYGP+E +         SGL   + +H N   G    +YGDPAY L +H+  PY   N   L  +  EFN+ MSS RVSVE
Sbjct:  146 MYNGHKRIHAIKFQSVVAPNGLIANLYGPIEGKRHDAGMLRMSGLLDQLDQHCNTPLGDPLCIYGDPAYPLRRHLQKPYQHPN---LDERQLEFNRSMSSVRVSVE 248

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig119506.1503.1 vs. uniprot

BLAST of mRNA_H-elongata_contig119506.1503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KVK0_9PHAE	7.280e-25	47.62	DDE Tnp4 domain-containing protein n=2 Tax=Ectocar...	[more]
A0A6H5KY46_9PHAE	1.280e-24	47.62	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5KB08_9PHAE	1.120e-23	47.62	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
D8LL85_ECTSI	5.590e-23	48.57	DDE Tnp4 domain-containing protein n=4 Tax=Ectocar...	[more]
A0A6H5KLS3_9PHAE	5.960e-22	46.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K0J0_9PHAE	7.320e-22	44.76	DDE Tnp4 domain-containing protein (Fragment) n=1 ...	[more]
A0A7D9JJC4_PARCT	2.100e-21	49.06	DDE Tnp4 domain-containing protein n=1 Tax=Paramur...	[more]
A0A6S7JPM4_PARCT	9.320e-21	50.00	DDE Tnp4 domain-containing protein n=3 Tax=Paramur...	[more]
A0A6G0XLE7_9STRA	1.560e-20	46.15	DDE Tnp4 domain-containing protein n=1 Tax=Aphanom...	[more]
A0A7D9LRU2_PARCT	5.370e-20	47.17	DDE Tnp4 domain-containing protein n=1 Tax=Paramur...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 1..96 e-value: 1.2E-7 score: 31.5

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig119506	contig	H-elongata_contig119506:600..890 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig119506.1503.1	mRNA_H-elongata_contig119506.1503.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig119506 600..890 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig119506.1503.1 ID=prot_H-elongata_contig119506.1503.1|Name=mRNA_H-elongata_contig119506.1503.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp
MYNGHKRCHAFKFQETVKPDGVIVSLYGPVEDRSGLGQLMQEHMNIDGQA
YQVYGDPAYGLSQHIFTPYNATNAVDLTLQMCEFNKRMSSCRVSVE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027806	HARBI1_dom