prot_H-elongata_contig119401.1494.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119401.1494.1
Unique Nameprot_H-elongata_contig119401.1494.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
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BLAST of mRNA_H-elongata_contig119401.1494.1 vs. uniprot
Match: D8LGD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD8_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 7.830e-37
Identity = 67/92 (72.83%), Postives = 77/92 (83.70%), Query Frame = 0 
Query:    1 LEAFPALAQVDPDRLDVRAKLRFIRHTMGAEPAIVAVSFPQFFGHPLERHIAPRHAFLVASGRPSGARLVEKACRGLRRMLELPANRCASDI 92
            LE+FP LA VDPD+L + AKLRF+RHT+GAE   VAVSFPQFFGHPLER IAPRHAFLV++GRPSG RL+E  CRGLRRMLELP NR   ++
Sbjct:  213 LESFPTLAHVDPDKLGLPAKLRFLRHTIGAEVRTVAVSFPQFFGHPLERLIAPRHAFLVSNGRPSGDRLLETGCRGLRRMLELPVNRFVVEM 304
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BLAST of mRNA_H-elongata_contig119401.1494.1 vs. uniprot
Match: A0A6H5KU03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU03_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 9.270e-26
Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 0 
Query:    1 LEAFPALAQVDPDRLDVRAKLRFIRHTMGAEPAIVAVSFPQFFGHPLERHIAPRHAFLVASGRPSGA 67
            LE+FP LA VDPD+L + AKLRF+RHT+G E   VAVSFPQFFGHPLER IAPRHAFLVA+GRPSGA
Sbjct:  172 LESFPTLAHVDPDKLGLPAKLRFLRHTIGGEVRTVAVSFPQFFGHPLERLIAPRHAFLVANGRPSGA 238
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119401.1494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGD8_ECTSI7.830e-3772.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU03_9PHAE9.270e-2677.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 1..82
e-value: 2.2E-6
score: 29.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119401contigH-elongata_contig119401:78..1333 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119401.1494.1mRNA_H-elongata_contig119401.1494.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119401 78..1333 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119401.1494.1 ID=prot_H-elongata_contig119401.1494.1|Name=mRNA_H-elongata_contig119401.1494.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
LEAFPALAQVDPDRLDVRAKLRFIRHTMGAEPAIVAVSFPQFFGHPLERH
IAPRHAFLVASGRPSGARLVEKACRGLRRMLELPANRCASDI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf