prot_H-elongata_contig119393.1492.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119393.1492.1
Unique Nameprot_H-elongata_contig119393.1492.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig119393.1492.1 vs. uniprot
Match: D7G7J8_ECTSI (Nucleolar complex associated 2 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7J8_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 2.840e-47
Identity = 86/102 (84.31%), Postives = 93/102 (91.18%), Query Frame = 0
Query:    1 VRLLAYLRVRQMAEGLPFPFMESCMRGLYLAFAKRARAPPPTEAGKTSLRVMEGCVVELYGMDGASAYQNAFLYIRQLSLLLRRAMQQKSKDSVQAVRRWQV 102
            VRLLAYLRVRQMA  LPFPF+E CM+ LYLAFAKRARAPP +++GK SLRVMEGCVVELYGMD  SAYQNAFLYIRQLSLLLRRAMQ ++KDSVQAVRRWQV
Sbjct:  511 VRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQSGKVSLRVMEGCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHRTKDSVQAVRRWQV 612          
BLAST of mRNA_H-elongata_contig119393.1492.1 vs. uniprot
Match: B7FQ14_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ14_PHATC)

HSP 1 Score: 101 bits (251), Expect = 8.320e-23
Identity = 53/103 (51.46%), Postives = 75/103 (72.82%), Query Frame = 0
Query:    1 VRLLAYLRVRQMAEGLPFPFMESCMRGLYLAFAKRARAPPPTEA--GKTSLRVMEGCVVELYGMDGASAYQNAFLYIRQLSLLLRRAMQQKSKDSVQAVRRWQ 101
            VRL A+ R+RQ+A   PFPF+E+C++ +YLA+A+RA+    + A     +L  M  C+VELY +D  S+YQ+AF+YIRQL+LLLR AMQ+K+K+S Q V  WQ
Sbjct:  386 VRLNAFFRIRQLALTQPFPFVETCLKKIYLAYARRAKLGVSSSATTAMPTLTFMGNCLVELYSLDYHSSYQHAFVYIRQLALLLRAAMQKKTKESFQQVFCWQ 488          
BLAST of mRNA_H-elongata_contig119393.1492.1 vs. uniprot
Match: A0A7S1D2V9_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2V9_CYCTE)

HSP 1 Score: 98.2 bits (243), Expect = 2.440e-22
Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 0
Query:    1 VRLLAYLRVRQMAEGLPFPFMESCMRGLYLAFAKRARAPPPTEAGKTS----LRVMEGCVVELYGMDGASAYQNAFLYIRQLSLLLRRAMQQKSKDSVQAVRRWQ 101
            VRL A+LR+RQMA   PFPF+E C++  YLA+AKRA+    T A  TS    L  M  CVVELY +D  S+YQ+AF+YIRQL+L LR AMQ+K+ ++ Q V  WQ
Sbjct:  204 VRLNAFLRIRQMAVTQPFPFIEDCLKKTYLAYAKRAKFG--TSATATSVLPTLTFMGNCVVELYTLDYHSSYQHAFVYIRQLALHLRSAMQKKTPEAFQVVYCWQ 306          
BLAST of mRNA_H-elongata_contig119393.1492.1 vs. uniprot
Match: A0A1E7FSB6_9STRA (Noc2-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSB6_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 9.990e-22
Identity = 56/104 (53.85%), Postives = 75/104 (72.12%), Query Frame = 0
Query:    1 VRLLAYLRVRQMAEGLPFPFMESCMRGLYLAFAKRAR---APPPTEAGKTSLRVMEGCVVELYGMDGASAYQNAFLYIRQLSLLLRRAMQQKSKDSVQAVRRWQ 101
            VRL A+LR+RQ+A   PFPF+E C++ LYLA+A+RA+   A   T A  T L  M  CVVELY +D  S+YQ+AF+YIRQL+L LR AMQ+K+ +++ AV  WQ
Sbjct:  359 VRLHAFLRIRQLAMTQPFPFIEECLKKLYLAYAQRAKFATASSVTSALPT-LTFMGNCVVELYSLDYHSSYQHAFIYIRQLALHLRTAMQRKTPEAMGAVYCWQ 461          
BLAST of mRNA_H-elongata_contig119393.1492.1 vs. uniprot
Match: A0A7S2S7C6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S7C6_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.000e-21
Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 0
Query:    1 VRLLAYLRVRQMAEGLPFPFMESCMRGLYLAFAKRAR---APPPTEAGKTSLRVMEGCVVELYGMDGASAYQNAFLYIRQLSLLLRRAMQQKSKDSVQAVRRWQ 101
            VRL A+LR+RQ+A   PFPF+E C++  YLA+AKRA+   A   T    T L  M  CVVELY +D AS+YQ+AF+YIRQL+L LR A+Q+K+ DS + V  WQ
Sbjct:  396 VRLNAFLRIRQLAVTQPFPFIEQCLKSSYLAYAKRAKFANAATVTTLLPT-LTFMGNCVVELYSLDFASSYQHAFVYIRQLALHLRTALQKKTPDSFRVVYCWQ 498          
BLAST of mRNA_H-elongata_contig119393.1492.1 vs. uniprot
Match: W7T2Z2_9STRA (Uncharacterized protein family UPF0120 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Z2_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.010e-21
Identity = 51/101 (50.50%), Postives = 75/101 (74.26%), Query Frame = 0
Query:    1 VRLLAYLRVRQMAEGLPFPFMESCMRGLYLAFAKRARAPPPTEAGKTSLRVMEGCVVELYGMDGASAYQNAFLYIRQLSLLLRRAMQQKSKDSVQAVRRWQ 101
            V+L+A+LRVRQ A  LPFPF+E C++G YL++A+ A+    +EA    L +M   +VELYG+D ASAYQ+AF+Y+RQL+L LR A  +K+ +++Q V+ WQ
Sbjct:  417 VKLVAFLRVRQAATVLPFPFLEHCLKGAYLSYARNAKFV--SEASLPGLTLMGNGLVELYGLDLASAYQHAFVYVRQLALHLRAAYTKKTPEALQKVQCWQ 515          
BLAST of mRNA_H-elongata_contig119393.1492.1 vs. uniprot
Match: A0A448Z9V8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9V8_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.370e-21
Identity = 55/104 (52.88%), Postives = 75/104 (72.12%), Query Frame = 0
Query:    1 VRLLAYLRVRQMAEGLPFPFMESCMRGLYLAFAKRAR---APPPTEAGKTSLRVMEGCVVELYGMDGASAYQNAFLYIRQLSLLLRRAMQQKSKDSVQAVRRWQ 101
            VRL A+LR+RQ+A   PFPF+E C++ LYLA+A+RA+   A   T A  T L  M  CVVELY +D  S+YQ+AF+YIRQL+L LR AMQ+K+ +++ A+  WQ
Sbjct:  420 VRLHAFLRIRQLAMTQPFPFIEECLKKLYLAYAQRAKFATASSVTSALPT-LTFMGNCVVELYSLDYHSSYQHAFIYIRQLALHLRTAMQKKTPEAMGAIYCWQ 522          
BLAST of mRNA_H-elongata_contig119393.1492.1 vs. uniprot
Match: A0A1Z5J7C2_FISSO (Nucleolar complex protein 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7C2_FISSO)

HSP 1 Score: 94.4 bits (233), Expect = 2.250e-20
Identity = 50/103 (48.54%), Postives = 70/103 (67.96%), Query Frame = 0
Query:    1 VRLLAYLRVRQMAEGLPFPFMESCMRGLYLAFAKRARAPPPTEAGKT--SLRVMEGCVVELYGMDGASAYQNAFLYIRQLSLLLRRAMQQKSKDSVQAVRRWQ 101
            VRL A+LR+RQ+A   PFPF+E  ++  YLA+AKRA+            +L  M  C+ ELY +D  S+YQ+AF+YIRQL+LLLR AM +K+K+++Q V  WQ
Sbjct:  401 VRLNAFLRIRQLALTQPFPFIEDILKKTYLAYAKRAKFGTGASVSSVLPTLTFMGNCLCELYSLDHHSSYQHAFVYIRQLALLLRTAMYKKTKEAMQQVYHWQ 503          
BLAST of mRNA_H-elongata_contig119393.1492.1 vs. uniprot
Match: A0A7S4MG20_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MG20_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.910e-20
Identity = 48/103 (46.60%), Postives = 72/103 (69.90%), Query Frame = 0
Query:    1 VRLLAYLRVRQMAEGLPFPFMESCMRGLYLAFAKRAR--APPPTEAGKTSLRVMEGCVVELYGMDGASAYQNAFLYIRQLSLLLRRAMQQKSKDSVQAVRRWQ 101
            VRL ++LRVRQ+A   PFPF+E C++  YL +A+RA+        +   +L  M  CVVELY +D AS+Y++AF+YIRQL+L LR A+Q+++ +S++ V  WQ
Sbjct:  292 VRLRSFLRVRQLAVTQPFPFVEDCLKSSYLCYARRAKFGTAASVHSALPTLTFMGNCVVELYSLDYASSYRHAFVYIRQLALHLRTALQRRTPESLRVVYCWQ 394          
BLAST of mRNA_H-elongata_contig119393.1492.1 vs. uniprot
Match: A0A7S2VGJ3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VGJ3_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 3.070e-20
Identity = 50/103 (48.54%), Postives = 73/103 (70.87%), Query Frame = 0
Query:    1 VRLLAYLRVRQMAEGLPFPFMESCMRGLYLAFAKRAR--APPPTEAGKTSLRVMEGCVVELYGMDGASAYQNAFLYIRQLSLLLRRAMQQKSKDSVQAVRRWQ 101
            VRL A+ R+RQ+A+  PFPF+E+C+R  YLA+A+RA+     PT    ++L  M   VVELY +D  S+YQ+AF+YIRQL+L LR A+Q+ + +S+  + RWQ
Sbjct:  441 VRLNAFFRIRQLAKTQPFPFIETCLRKTYLAYARRAKHGKSAPTVEVLSTLTFMGNSVVELYSLDLHSSYQHAFVYIRQLALHLRAAIQKTTPESIAQLFRWQ 543          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119393.1492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7J8_ECTSI2.840e-4784.31Nucleolar complex associated 2 homolog n=2 Tax=Ect... [more]
B7FQ14_PHATC8.320e-2351.46Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1D2V9_CYCTE2.440e-2254.29Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A1E7FSB6_9STRA9.990e-2253.85Noc2-domain-containing protein n=1 Tax=Fragilariop... [more]
A0A7S2S7C6_9STRA1.000e-2153.85Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
W7T2Z2_9STRA1.010e-2150.50Uncharacterized protein family UPF0120 n=2 Tax=Mon... [more]
A0A448Z9V8_9STRA1.370e-2152.88Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1Z5J7C2_FISSO2.250e-2048.54Nucleolar complex protein 2 n=2 Tax=Fistulifera so... [more]
A0A7S4MG20_9STRA2.910e-2046.60Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2VGJ3_9STRA3.070e-2048.54Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005343Nucleolar complex protein 2PFAMPF03715Noc2coord: 20..101
e-value: 1.8E-19
score: 70.1
IPR005343Nucleolar complex protein 2PANTHERPTHR12687NUCLEOLAR COMPLEX 2 AND RAD4-RELATEDcoord: 1..101
NoneNo IPR availablePANTHERPTHR12687:SF4NUCLEOLAR COMPLEX PROTEIN 2 HOMOLOGcoord: 1..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119393contigH-elongata_contig119393:374..1470 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119393.1492.1mRNA_H-elongata_contig119393.1492.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119393 374..1470 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119393.1492.1 ID=prot_H-elongata_contig119393.1492.1|Name=mRNA_H-elongata_contig119393.1492.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
VRLLAYLRVRQMAEGLPFPFMESCMRGLYLAFAKRARAPPPTEAGKTSLR
VMEGCVVELYGMDGASAYQNAFLYIRQLSLLLRRAMQQKSKDSVQAVRRW
QV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005343Noc2