prot_H-elongata_contig119243.1483.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119243.1483.1
Unique Nameprot_H-elongata_contig119243.1483.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length65
Homology
BLAST of mRNA_H-elongata_contig119243.1483.1 vs. uniprot
Match: A0A146HBL6_MYCCL (Uncharacterized protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HBL6_MYCCL)

HSP 1 Score: 82.0 bits (201), Expect = 3.180e-17
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 0
Query:    1 MRQIPNREIVGALMWAVTMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWCTRDLGITYGG 65
            M+++P RE++GAL+W  T TRPD++F    L++F  NPG  HW AA++ LQYL  TR LG+T+GG
Sbjct:   60 MKKLPYRELIGALVWLSTATRPDLAFTVAVLSRFVSNPGRAHWDAAKRTLQYLKGTRTLGLTFGG 124          
BLAST of mRNA_H-elongata_contig119243.1483.1 vs. uniprot
Match: M2QFN1_CERS8 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ceriporiopsis subvermispora (strain B) TaxID=914234 RepID=M2QFN1_CERS8)

HSP 1 Score: 82.8 bits (203), Expect = 4.170e-17
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 0
Query:    1 MRQIPNREIVGALMWAVTMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWCTRDLGITYGG 65
            M++ P RE++GAL W   ++RPDISFA + LA+FN +PGP HWRAA++ LQYL  TRD  +  GG
Sbjct:  165 MKRRPYRELLGALTWISVISRPDISFAVNNLAQFNADPGPKHWRAAKRILQYLTGTRDYRLVLGG 229          
BLAST of mRNA_H-elongata_contig119243.1483.1 vs. uniprot
Match: UPI001E1BB9B0 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BB9B0)

HSP 1 Score: 77.4 bits (189), Expect = 3.750e-16
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    1 MRQIPNREIVGALMWAVTMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWCTRDLGITY 63
            M+QIP +E VGAL++  T TRPDIS+A  Q+AKFN NPG  HW+A ++  +YL  TR+ GI +
Sbjct:   12 MKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGIFF 74          
BLAST of mRNA_H-elongata_contig119243.1483.1 vs. uniprot
Match: UPI001E1BDE4E (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BDE4E)

HSP 1 Score: 77.8 bits (190), Expect = 9.480e-16
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    1 MRQIPNREIVGALMWAVTMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWCTRDLGITY 63
            M+QIP +E VGAL++  T TRPDIS+A  Q+AKFN NPG  HW+A ++  +YL  TR+ GI +
Sbjct:   32 MKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGILF 94          
BLAST of mRNA_H-elongata_contig119243.1483.1 vs. uniprot
Match: UPI001E1BA9BB (uncharacterized protein LOC116922675 n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA9BB)

HSP 1 Score: 77.8 bits (190), Expect = 2.850e-15
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    1 MRQIPNREIVGALMWAVTMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWCTRDLGITY 63
            M+QIP +E VGAL++  T TRPDIS+A  Q+AKFN NPG  HW+A ++  +YL  TR+ GI +
Sbjct:  275 MKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGILF 337          
BLAST of mRNA_H-elongata_contig119243.1483.1 vs. uniprot
Match: UPI001876D8AC (polyprotein n=1 Tax=Colletotrichum truncatum TaxID=5467 RepID=UPI001876D8AC)

HSP 1 Score: 76.3 bits (186), Expect = 4.580e-15
Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   10 VGALMWAVTMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWCTRDLGITYG 64
            VG L++AV MTRPD++FAA +LA+FN NPGP H RAA +AL YL+ TR L + YG
Sbjct:  202 VGTLLYAVIMTRPDVAFAASRLARFNQNPGPKHQRAADRALAYLYSTRYLCLEYG 256          
BLAST of mRNA_H-elongata_contig119243.1483.1 vs. uniprot
Match: UPI001EE127E3 (secreted RxLR effector protein 161-like n=2 Tax=Daphnia TaxID=6668 RepID=UPI001EE127E3)

HSP 1 Score: 73.2 bits (178), Expect = 9.660e-15
Identity = 28/63 (44.44%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 MRQIPNREIVGALMWAVTMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWCTRDLGITY 63
            M+++P +  VGAL++ +T TRPDI++A  ++A+FN NPGP HW A ++ ++YL  T++ GI +
Sbjct:   32 MKEVPYQSAVGALLYLLTTTRPDIAYAVSKVARFNQNPGPQHWIAVKRIIRYLAGTKEYGIIF 94          
BLAST of mRNA_H-elongata_contig119243.1483.1 vs. uniprot
Match: UPI001E1BCD31 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BCD31)

HSP 1 Score: 74.3 bits (181), Expect = 1.810e-14
Identity = 32/63 (50.79%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    1 MRQIPNREIVGALMWAVTMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWCTRDLGITY 63
            M+ IP +E VGAL++  T TRPDIS+A  Q+AKF+ NPG  HW+A ++ ++Y+  TR  GI Y
Sbjct:   32 MKNIPYKEAVGALLYLSTTTRPDISYAVGQVAKFSQNPGIQHWKAVKRIIRYIAGTRTYGILY 94          
BLAST of mRNA_H-elongata_contig119243.1483.1 vs. uniprot
Match: A0A5A7VDS1_CUCME (Retrotransposon protein, putative, Ty1-copia subclass, expressed n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7VDS1_CUCME)

HSP 1 Score: 73.9 bits (180), Expect = 5.090e-14
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 0
Query:    1 MRQIPNREIVGALMWAVTMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWCTRDLGITY 63
            M  IP   IVG+L++A T TRPDISFAA  L ++  NPG  HW+ A+K L+YL  T+D  +TY
Sbjct:  205 METIPYASIVGSLLYAQTCTRPDISFAAGMLGRYQSNPGMDHWKVAKKVLKYLQGTKDYMLTY 267          
BLAST of mRNA_H-elongata_contig119243.1483.1 vs. uniprot
Match: A0A2R6S6M2_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6S6M2_9APHY)

HSP 1 Score: 73.2 bits (178), Expect = 1.290e-13
Identity = 33/65 (50.77%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    1 MRQIPNREIVGALMWAVTMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWCTRDLGITYGG 65
            M+  P RE +GALM+A   TRPDI++A   LAKF+ NPGPTHW A ++   YL  T+   +T GG
Sbjct:   22 MKNKPYREALGALMYASVGTRPDITYAVSTLAKFSQNPGPTHWTALKRVFAYLCGTQHYTLTLGG 86          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119243.1483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A146HBL6_MYCCL3.180e-1752.31Uncharacterized protein n=1 Tax=Mycena chlorophos ... [more]
M2QFN1_CERS84.170e-1755.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001E1BB9B03.750e-1653.97secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
UPI001E1BDE4E9.480e-1653.97secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
UPI001E1BA9BB2.850e-1553.97uncharacterized protein LOC116922675 n=1 Tax=Daphn... [more]
UPI001876D8AC4.580e-1561.82polyprotein n=1 Tax=Colletotrichum truncatum TaxID... [more]
UPI001EE127E39.660e-1544.44secreted RxLR effector protein 161-like n=2 Tax=Da... [more]
UPI001E1BCD311.810e-1450.79secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
A0A5A7VDS1_CUCME5.090e-1452.38Retrotransposon protein, putative, Ty1-copia subcl... [more]
A0A2R6S6M2_9APHY1.290e-1350.77Uncharacterized protein n=1 Tax=Hermanssonia centr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..65
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119243contigH-elongata_contig119243:24..218 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119243.1483.1mRNA_H-elongata_contig119243.1483.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119243 24..434 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119243.1483.1 ID=prot_H-elongata_contig119243.1483.1|Name=mRNA_H-elongata_contig119243.1483.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
MRQIPNREIVGALMWAVTMTRPDISFAAHQLAKFNDNPGPTHWRAAQKAL
QYLWCTRDLGITYGG
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