prot_H-elongata_contig119152.1480.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119152.1480.1
Unique Nameprot_H-elongata_contig119152.1480.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length143
Homology
BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: D8LIU7_ECTSI (ABC transporter family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU7_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 3.160e-62
Identity = 110/143 (76.92%), Postives = 119/143 (83.22%), Query Frame = 0
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEETRGEARELRDRRRRQEEEGGVGAILDRNPNLK 143
            LGLVKPF +LLLD VTTSL DVVVRQDLL WL KES + GATIIYATHIFDGLD+WPTHLTYLTR    +GSTGWQGRLEDLELNRQMKERGETCTLLKVA +WLR EQEE R   +E  +RRR+ EE GG  AI +RNPNLK
Sbjct:   63 LGLVKPFKLLLLDEVTTSL-DVVVRQDLLHWLHKESVERGATIIYATHIFDGLDEWPTHLTYLTR----DGSTGWQGRLEDLELNRQMKERGETCTLLKVAVHWLRGEQEEYR---KETLERRRQVEESGGSDAIRNRNPNLK 197          
BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A6H5L275_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L275_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 2.900e-59
Identity = 110/143 (76.92%), Postives = 117/143 (81.82%), Query Frame = 0
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEETRGEARELRDRRRRQEEEGGVGAILDRNPNLK 143
            LGLVKPF +LLLD VTTSL DVVVRQDLL WL KES   GATIIYATHIFDGLD+WPTHLTYLTR    +GSTGWQGRLEDLELNRQMKERGETCTLLKVA +WLR EQEE R   RE  + RR+ EE GG  AI +RNPNLK
Sbjct:  217 LGLVKPFKLLLLDEVTTSL-DVVVRQDLLHWLHKESVGRGATIIYATHIFDGLDEWPTHLTYLTR----DGSTGWQGRLEDLELNRQMKERGETCTLLKVAVHWLRGEQEEYR---RETLESRRQVEESGGSDAIRNRNPNLK 351          
BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A482S0N2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0N2_9ARCH)

HSP 1 Score: 141 bits (355), Expect = 3.810e-40
Identity = 75/111 (67.57%), Postives = 88/111 (79.28%), Query Frame = 0
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEE 111
            +GL++PF ILLLD VT SL DVVVRQDLL WLR+ESE   ATI+YATHIFDGLDDWPTH+ YLT + R    TGWQGRLEDL+L R+M+ RGE   LL++A  WLRAE E+
Sbjct:   16 IGLLRPFKILLLDEVTVSL-DVVVRQDLLRWLRRESESRQATILYATHIFDGLDDWPTHVHYLTNKGR----TGWQGRLEDLQLYREMRGRGEPSPLLRIAETWLRAELED 121          
BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A835ZJB2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJB2_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.080e-39
Identity = 77/108 (71.30%), Postives = 88/108 (81.48%), Query Frame = 0
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAE 108
            LGLV+PF+ILLLD +TTSL DVVVRQDLL WLR+ESE  GATIIYATHIFDGLDDWP+HLTYLT     NG+TGWQGR+EDL+L R ++  G+   LL VAC WLR E
Sbjct:  161 LGLVRPFDILLLDEITTSL-DVVVRQDLLQWLRRESEVRGATIIYATHIFDGLDDWPSHLTYLTA----NGATGWQGRIEDLQLYRTLRAEGKPA-LLNVACTWLRDE 262          
BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A4D9D643_9STRA (ABC transporter domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D643_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.010e-36
Identity = 77/138 (55.80%), Postives = 99/138 (71.74%), Query Frame = 0
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEETRGEARELRDRRRRQEEEGGVGAILDR 138
            LGLV+PF+ILLLD VT SL DVVVRQDLL WLR+E+E  GAT+IYATHIFDGLDDWP+HL ++T Q R    TGWQG+LEDLE  ++++  G+   LL++A  WLR E EE +        RR+ +E+E G   + D+
Sbjct:  171 LGLVRPFDILLLDEVTVSL-DVVVRQDLLRWLRRETEVRGATVIYATHIFDGLDDWPSHLHFMTNQGR----TGWQGKLEDLEHYQELRRAGDPGPLLRIAERWLRTETEEQK--------RRKLREKELGTQVLDDK 295          
BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A7S3PTX2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTX2_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.700e-35
Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 0
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEETR 113
            +GL++PF +LLLD +TTSL DV VRQDLL WL KE+E+ GATIIYATHIFDGLDDWPTHLTYLT     +G+TGWQG++++LE  +Q+K       +L VA +WLR E E  R
Sbjct:  174 IGLIRPFKVLLLDEITTSL-DVCVRQDLLGWLAKETEERGATIIYATHIFDGLDDWPTHLTYLTD----SGNTGWQGKMDELEYYQQLKADNHPAKMLAVADHWLRKELERNR 281          
BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A7S1DA85_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DA85_CYCTE)

HSP 1 Score: 131 bits (329), Expect = 1.860e-35
Identity = 68/113 (60.18%), Postives = 85/113 (75.22%), Query Frame = 0
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEETR 113
            LGL++PF +LLLD +TTSL DV VRQDLL WL +ESE+ GATI+YATHIFDGLDDW THL YLT     NGS GWQG++ DLE+ +++K+      +L +A +WLR E EE R
Sbjct:   56 LGLIRPFKLLLLDEITTSL-DVCVRQDLLRWLVRESEERGATIVYATHIFDGLDDWATHLFYLTN----NGSCGWQGKIGDLEVYQKLKQDNHPAKMLAIADHWLRKELEENR 163          
BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A8J2SKG5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKG5_9STRA)

HSP 1 Score: 132 bits (333), Expect = 6.910e-35
Identity = 67/108 (62.04%), Postives = 85/108 (78.70%), Query Frame = 0
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAE 108
            LGLV+PF+ILLLD VTT L DV+VRQDL+ WL+KE+E  GAT++YATHIFDGLDDWPTHL YL R    +G+TGWQG + +LEL  ++++ G    +LK+A  WLRAE
Sbjct:  196 LGLVRPFDILLLDEVTTCL-DVIVRQDLMRWLQKETETRGATVVYATHIFDGLDDWPTHLHYLNR----HGATGWQGPMGELELYSKLRKEGHPSPMLKIATTWLRAE 298          
BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A7R9YAI1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAI1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.190e-34
Identity = 65/108 (60.19%), Postives = 83/108 (76.85%), Query Frame = 0
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAE 108
            LGLV+PF +LL+D VT SL DVVVRQDLL+WLR+E E  G  +IYATHIFDGLDDWPTHL YLT +    G+TGWQG + +L++ R+++  GE   +L++AC WLR E
Sbjct:  171 LGLVRPFEVLLMDEVTVSL-DVVVRQDLLLWLRQECETRGCCVIYATHIFDGLDDWPTHLHYLTSE----GTTGWQGPIGELDIYRELRAAGEPSPMLRIACKWLRDE 273          
BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Match: A0A1Z5J655_FISSO (CCR4-NOT complex subunit CAF16 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J655_FISSO)

HSP 1 Score: 131 bits (329), Expect = 3.160e-34
Identity = 68/113 (60.18%), Postives = 84/113 (74.34%), Query Frame = 0
Query:    1 LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIFDGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKVACYWLRAEQEETR 113
            LGL++PF ILLLD +TTSL DV VRQDLL WL +ESE+ GATIIYATHIFDGLDDW +HL YLT +    G  GWQG++E+LE+  ++K     C +L +A +WLRAE  E R
Sbjct:  182 LGLIRPFQILLLDEITTSL-DVCVRQDLLRWLVRESEERGATIIYATHIFDGLDDWASHLFYLTNK----GQCGWQGKMEELEVYHKLKAENHPCKMLAIADHWLRAELNENR 289          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119152.1480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIU7_ECTSI3.160e-6276.92ABC transporter family protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L275_9PHAE2.900e-5976.92ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A482S0N2_9ARCH3.810e-4067.57Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A835ZJB2_9STRA1.080e-3971.30P-loop containing nucleoside triphosphate hydrolas... [more]
A0A4D9D643_9STRA2.010e-3655.80ABC transporter domain-containing protein n=2 Tax=... [more]
A0A7S3PTX2_9STRA1.700e-3561.06Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1DA85_CYCTE1.860e-3560.18Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A8J2SKG5_9STRA6.910e-3562.04Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9YAI1_9STRA1.190e-3460.19Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A1Z5J655_FISSO3.160e-3460.18CCR4-NOT complex subunit CAF16 n=2 Tax=Fistulifera... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..129
NoneNo IPR availableGENE3D3.40.50.300coord: 2..132
e-value: 3.0E-5
score: 25.4
NoneNo IPR availablePANTHERPTHR12847:SF5CCR4-ASSOCIATED FACTOR 16coord: 1..125
NoneNo IPR availablePANTHERPTHR12847ATP-BINDING CASSETTE ABC TRANSPORTER-RELATEDcoord: 1..125
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.574

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119152contigH-elongata_contig119152:2..1828 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119152.1480.1mRNA_H-elongata_contig119152.1480.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119152 2..1828 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119152.1480.1 ID=prot_H-elongata_contig119152.1480.1|Name=mRNA_H-elongata_contig119152.1480.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp
LGLVKPFNILLLDVVTTSLADVVVRQDLLVWLRKESEQGGATIIYATHIF
DGLDDWPTHLTYLTRQARRNGSTGWQGRLEDLELNRQMKERGETCTLLKV
ACYWLRAEQEETRGEARELRDRRRRQEEEGGVGAILDRNPNLK
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