prot_H-elongata_contig118994.1470.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig118994.1470.1
Unique Nameprot_H-elongata_contig118994.1470.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length178
Homology
BLAST of mRNA_H-elongata_contig118994.1470.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.590e-34
Identity = 72/169 (42.60%), Postives = 106/169 (62.72%), Query Frame = 0
Query:   11 EVEEMRQIPYREIVGALMRAATMTRPEVSFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRNLGITYRGEPGGGTKLSAWVDADYGTCTCLDTRRSGSGGTVMMAGGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLRQVKEFMIPPIDV-AIKRHEDNEGAIKM 178
            E E    +P+RE+VG+LM  AT TRP+++ A   +A++  +P   HW+AA   L Y+ RT  +GIT+      G  +  +VDADY   +    RRS SGG VM  GG ++WFSR QK    +++E+EYVA+A+++ E+ FLRQV  FM+P   +  I   EDN+GAI++
Sbjct:   91 ENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADY--ASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQI 257          
BLAST of mRNA_H-elongata_contig118994.1470.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 3.360e-34
Identity = 72/169 (42.60%), Postives = 106/169 (62.72%), Query Frame = 0
Query:   11 EVEEMRQIPYREIVGALMRAATMTRPEVSFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRNLGITYRGEPGGGTKLSAWVDADYGTCTCLDTRRSGSGGTVMMAGGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLRQVKEFMIPPIDV-AIKRHEDNEGAIKM 178
            E E    +P+RE+VG+LM  AT TRP+++ A   +A++  +P   HW+AA   L Y+ RT  +GIT+      G  +  +VDADY   +    RRS SGG VM  GG ++WFSR QK    +++E+EYVA+A+++ E+ FLRQV  FM+P   +  I   EDN+GAI++
Sbjct:  146 ENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADY--ASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQI 312          
BLAST of mRNA_H-elongata_contig118994.1470.1 vs. uniprot
Match: UPI001E1BB9B0 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BB9B0)

HSP 1 Score: 128 bits (321), Expect = 3.660e-34
Identity = 75/176 (42.61%), Postives = 110/176 (62.50%), Query Frame = 0
Query:    5 SSQTDAEVEEMRQIPYREIVGALMRAATMTRPEVSFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRNLGITYRGEPGGGTK-LSAWVDADYGTCTCLDTRRSGSGGTVMMAGGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLRQ-VKEFMIPPIDVAIKRHEDNEGAIKM 178
            S QTD EVEEM+QIPY+E VGAL+  +T TRP++S+A  Q+AKFN+NPG  HW+A ++  +YL  TR  GI +   P G  + +  + DAD+      D + S SG   +  GG+ SWFSR Q  T+ +++E+E+VA  E   E  ++R  +KE     ++ AI    DN+GAI++
Sbjct:    2 SPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGIFFSPNPSGKEEEIVGFTDADHAGDP--DDQTSTSGCVFICHGGSFSWFSRKQGCTSLSTTEAEFVAGGEAAKEATWIRAFLKEIGKRNLE-AIPLFCDNQGAIRV 174          
BLAST of mRNA_H-elongata_contig118994.1470.1 vs. uniprot
Match: A0A6H5K2P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P8_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 5.120e-34
Identity = 73/172 (42.44%), Postives = 109/172 (63.37%), Query Frame = 0
Query:    8 TDAEVEEMR-QIPYREIVGALMRAATMTRPEVSFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRNLGITYRGEPGGGTKLSAWVDADYGTCTCLDTRRSGSGGTVMMAGGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLRQVKEFMIPPIDV-AIKRHEDNEGAIK 177
            +D +V E    +P+RE+VG+LM  AT TRP+++ AA  +A++  +P   HW+AA   L Y+ RT  +GIT+ G    G  +  +VDADY +      RRS SGG VM   G ++WFSR QK    +++E+EYVA+A+++ E+ FLRQV  F++P   +  I   EDN+GAI+
Sbjct:   94 SDFDVNEASADVPFRELVGSLMWLATQTRPDIADAARAVARYCPSPKMVHWKAALGILGYVRRTSWMGITFEGGVVTGMSMQVFVDADYASKAA--DRRSVSGGLVMCVWGGVTWFSRTQKSVTLSTTEAEYVAIADVLKEVLFLRQVWRFILPDASMPCIPVFEDNQGAIQ 263          
BLAST of mRNA_H-elongata_contig118994.1470.1 vs. uniprot
Match: UPI001E1BCD31 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BCD31)

HSP 1 Score: 129 bits (325), Expect = 5.950e-34
Identity = 71/173 (41.04%), Postives = 107/173 (61.85%), Query Frame = 0
Query:    5 SSQTDAEVEEMRQIPYREIVGALMRAATMTRPEVSFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRNLGITYRGEPGGGTKLSAWVDADYGTCTCLDTRRSGSGGTVMMAGGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLRQVKEFMIPPIDVAIKRHEDNEGAIK 177
            S Q   E EEM+ IPY+E VGAL+  +T TRP++S+A  Q+AKF+ NPG  HW+A ++ ++Y+  TR  GI Y  E G    ++ + DADYG    LD R S SG  ++ + G+ISWFSR Q+ T+ +++ESE+V  +E   E  ++R + + +       I    DN+GAI+
Sbjct:   22 SPQQQKEKEEMKNIPYKEAVGALLYLSTTTRPDISYAVGQVAKFSQNPGIQHWKAVKRIIRYIAGTRTYGILYSQEKG--EMVTGYTDADYGGD--LDDRTSTSGCVLLCSSGSISWFSRKQECTSLSTTESEFVTASEAAKEATWIRSLLKEIRRREQEPIPLLWDNQGAIR 190          
BLAST of mRNA_H-elongata_contig118994.1470.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.290e-33
Identity = 72/169 (42.60%), Postives = 106/169 (62.72%), Query Frame = 0
Query:   11 EVEEMRQIPYREIVGALMRAATMTRPEVSFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRNLGITYRGEPGGGTKLSAWVDADYGTCTCLDTRRSGSGGTVMMAGGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLRQVKEFMIPPIDV-AIKRHEDNEGAIKM 178
            E E    +P+RE+VG+LM  AT TRP+++ A   +A++  +P   HW+AA   L Y+ RT  +GIT+      G  +  +VDADY   +    RRS SGG VM  GG ++WFSR QK    +++E+EYVA+A+++ E+ FLRQV  FM+P   +  I   EDN+GAI++
Sbjct:  208 ENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADY--ASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQI 374          
BLAST of mRNA_H-elongata_contig118994.1470.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.460e-33
Identity = 71/169 (42.01%), Postives = 105/169 (62.13%), Query Frame = 0
Query:   11 EVEEMRQIPYREIVGALMRAATMTRPEVSFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRNLGITYRGEPGGGTKLSAWVDADYGTCTCLDTRRSGSGGTVMMAGGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLRQVKEFMIPPIDV-AIKRHEDNEGAIKM 178
            E E    +P+RE+VG++M  AT TRP+++ A   +A++  +P   HW+AA   L Y+ RT  +GIT+      G  +  +VDADY        RRS SGG VM  GG ++WFSR QK    +++E+EYVA+A+++ E+ FLRQV  FM+P   +  I   EDN+GAI++
Sbjct:   63 ENEACADVPFRELVGSVMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADY--VRKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQV 229          
BLAST of mRNA_H-elongata_contig118994.1470.1 vs. uniprot
Match: UPI001E1BDE4E (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BDE4E)

HSP 1 Score: 127 bits (320), Expect = 3.740e-33
Identity = 75/176 (42.61%), Postives = 110/176 (62.50%), Query Frame = 0
Query:    5 SSQTDAEVEEMRQIPYREIVGALMRAATMTRPEVSFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRNLGITYRGEPGGGTK-LSAWVDADYGTCTCLDTRRSGSGGTVMMAGGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLRQ-VKEFMIPPIDVAIKRHEDNEGAIKM 178
            S QTD EVEEM+QIPY+E VGAL+  +T TRP++S+A  Q+AKFN+NPG  HW+A ++  +YL  TR  GI +   P G  + +  + DAD+      D + S SG   +  GG+ SWFSR Q  T+ +++E+E+VA  E   E  ++R  +KE     ++ AI    DN+GAI++
Sbjct:   22 SPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGILFSPNPSGKEEEIVDFTDADHAGDP--DDQTSTSGCVFICHGGSFSWFSRKQGCTSLSTTEAEFVAGGEAAKEATWIRAFLKEIGKRNLE-AIPLFCDNQGAIRV 194          
BLAST of mRNA_H-elongata_contig118994.1470.1 vs. uniprot
Match: A0A6H5KD14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD14_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 7.740e-33
Identity = 69/173 (39.88%), Postives = 106/173 (61.27%), Query Frame = 0
Query:    8 TDAEVEEMR-QIPYREIVGALMRAATMTRPEVSFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRNLGITYRGEPGGGTKLSAWVDADYGTCTCLDTRRSGSGGTVMMAGGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLRQVKEFMIPPIDV-AIKRHEDNEGAIKM 178
            +D +V E    +P RE++G+LM  AT TRP+++ A   +A++  +P   HW+A    L Y+ RT  +GIT+      G  +  +VD DY +      RRS SGG VM  GG ++WFSR +K    +++E+EYVA+A+++ E+ FLRQV  FM+P   +  I   EDN+GAI++
Sbjct:   18 SDFDVNEASADVPIRELIGSLMWLATQTRPDIANAVQAVARYCASPKMVHWKAPLGILGYVCRTNWMGITFERGVVTGMSMQVFVDPDYASKAA--DRRSVSGGLVMREGGGVTWFSRTKKCVTLSTTEAEYVAIADVMKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQI 188          
BLAST of mRNA_H-elongata_contig118994.1470.1 vs. uniprot
Match: A0A6H5JMV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV5_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 8.170e-33
Identity = 69/169 (40.83%), Postives = 104/169 (61.54%), Query Frame = 0
Query:   11 EVEEMRQIPYREIVGALMRAATMTRPEVSFAAHQLAKFNNNPGPTHWRAAQKALQYLWRTRNLGITYRGEPGGGTKLSAWVDADYGTCTCLDTRRSGSGGTVMMAGGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLRQVKEFMIPPIDV-AIKRHEDNEGAIKM 178
            E E    +P+RE+VG+LM  AT TRP+++ A   +A++  +P   HW+AA   L Y+ RT  +GI +      G  +  +VDADY   +     RS SGG V+  GG ++WFSR QK  A +++E++YVA+A ++ E+ FLRQV  FM+P   +  I   EDN+GAI++
Sbjct:   48 ENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGIAFERGVVTGMSVQVFVDADY--TSKATEHRSVSGGRVICGGGCVTWFSRTQKCVALSTTETQYVAIANVLKEVLFLRQVWRFMLPDAGIPCIPVFEDNQGAIQI 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118994.1470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP70_9PHAE1.590e-3442.60Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE3.360e-3442.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001E1BB9B03.660e-3442.61secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
A0A6H5K2P8_9PHAE5.120e-3442.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001E1BCD315.950e-3441.04secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
A0A6H5JEF2_9PHAE1.290e-3342.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K8K2_9PHAE1.460e-3342.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001E1BDE4E3.740e-3342.61secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
A0A6H5KD14_9PHAE7.740e-3339.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMV5_9PHAE8.170e-3340.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 11..155
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 11..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118994contigH-elongata_contig118994:7..540 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118994.1470.1mRNA_H-elongata_contig118994.1470.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig118994 7..540 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig118994.1470.1 ID=prot_H-elongata_contig118994.1470.1|Name=mRNA_H-elongata_contig118994.1470.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
IIPYSSQTDAEVEEMRQIPYREIVGALMRAATMTRPEVSFAAHQLAKFNN
NPGPTHWRAAQKALQYLWRTRNLGITYRGEPGGGTKLSAWVDADYGTCTC
LDTRRSGSGGTVMMAGGAISWFSRVQKVTAAASSESEYVALAEMVNELRF
LRQVKEFMIPPIDVAIKRHEDNEGAIKM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like