prot_H-elongata_contig1188.1455.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1188.1455.1
Unique Nameprot_H-elongata_contig1188.1455.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
BLAST of mRNA_H-elongata_contig1188.1455.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 67.0 bits (162), Expect = 3.020e-11
Identity = 31/65 (47.69%), Postives = 47/65 (72.31%), Query Frame = 0
Query:    8 DWWKAEETEMRGMVENCVYKQVARPKDKLVVGTKMLYKREVGQDDKVEKYKCRLVAQGFWQVEGV 72
            +W KA E E+    +  V+++V RP+D+ ++G+K ++K + G D +VEKYK RLVAQGF QVEG+
Sbjct: 1009 EWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGI 1073          
BLAST of mRNA_H-elongata_contig1188.1455.1 vs. uniprot
Match: A0A1X7TFD5_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TFD5_AMPQE)

HSP 1 Score: 57.8 bits (138), Expect = 3.210e-9
Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 0
Query:   16 EMRGMVENCVYKQVARPKDKLVVGTKMLYKREVGQDDKVEKYKCRLVAQGFWQ 68
            E   + EN V+  V  PKD+ VVG+K ++KR++G++ KVE+YK RLVAQG+ Q
Sbjct:    4 EFESLEENQVWDLVELPKDRRVVGSKWVFKRKIGENGKVERYKARLVAQGYSQ 56          
BLAST of mRNA_H-elongata_contig1188.1455.1 vs. uniprot
Match: A0A0J7K7I2_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K7I2_LASNI)

HSP 1 Score: 59.7 bits (143), Expect = 1.110e-8
Identity = 25/58 (43.10%), Postives = 43/58 (74.14%), Query Frame = 0
Query:   16 EMRGMVENCVYKQVARPKDKLVVGTKMLYKREVGQDDKVEKYKCRLVAQGFWQVEGVH 73
            E+R +++N  ++   RP D +V+G++M+ + ++G D+K+E+ K RLVAQGF+Q  GVH
Sbjct:    4 ELRSIIKNDTWELDERPDDSIVIGSRMVLRNKLGPDNKLERRKARLVAQGFYQQPGVH 61          
BLAST of mRNA_H-elongata_contig1188.1455.1 vs. uniprot
Match: A0A1B5Z7Z8_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A1B5Z7Z8_TRISU)

HSP 1 Score: 57.8 bits (138), Expect = 5.420e-8
Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 0
Query:    2 ESLEWDDWWKAEETEMRGMVENCVYKQVARPKDKLVVGTKMLYKREVGQDD-KVEKYKCRLVAQGFWQVEGV 72
            ES+E  DW KA   EM  + +N  +K V  PK+K VVG+K ++ ++ G    +  +YK RLVA+GF QVEG+
Sbjct:  878 ESIEGKDWLKAMNEEMLSLEKNQTWKLVPLPKNKRVVGSKWVFNKKEGIPGVEAPRYKARLVAKGFTQVEGI 949          
BLAST of mRNA_H-elongata_contig1188.1455.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM)

HSP 1 Score: 57.8 bits (138), Expect = 5.430e-8
Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    8 DWWKAEETEMRGMVENCVYKQVARPKDKLVVGTKMLYKREVGQDDKVEKYKCRLVAQGFWQVEGV 72
            +W  A   E+    +  VY++V RP+D+ VV +K +++ + G + +VEKYK RLVA+GF QVEG+
Sbjct:  640 EWLAACNEELHSFKQMGVYEEVDRPRDRKVVNSKWVFRIKRGPNGEVEKYKARLVAKGFTQVEGI 704          
BLAST of mRNA_H-elongata_contig1188.1455.1 vs. uniprot
Match: UPI000D630AD2 (probable LRR receptor-like serine/threonine-protein kinase At3g47570 n=1 Tax=Citrus sinensis TaxID=2711 RepID=UPI000D630AD2)

HSP 1 Score: 57.8 bits (138), Expect = 5.470e-8
Identity = 29/72 (40.28%), Postives = 46/72 (63.89%), Query Frame = 0
Query:    2 ESLEWDDWWKAEETEMRGMVENCVYKQVARPKDKLVVGTKMLYKREVGQDDKVEKYKCRLVAQGFWQVEGVH 73
            E+L+  +W+ A + E   ++EN  +  V R +++ VVG K +Y+ +   D  V KYK RLVA+GF Q+EGV+
Sbjct:   16 EALQDTNWFTAMKNEYDALIENRTWSLVRRTENQKVVGNKWVYRIKYNTDGSVAKYKARLVAKGFQQIEGVN 87          
BLAST of mRNA_H-elongata_contig1188.1455.1 vs. uniprot
Match: UPI001CB79F24 (hypothetical protein n=1 Tax=Blastococcus sp. CPCC 205250 TaxID=2732513 RepID=UPI001CB79F24)

HSP 1 Score: 56.6 bits (135), Expect = 6.160e-8
Identity = 26/66 (39.39%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    7 DDWWKAEETEMRGMVENCVYKQVARPKDKLVVGTKMLYKREVGQDDKVEKYKCRLVAQGFWQVEGV 72
            + W +A + EM+ + +N  +  V  PKD+  +G K ++KR+   + K+ KYK RLVA+G+ Q+EGV
Sbjct:   91 NQWEEAMKDEMKSLDQNHTWNLVKLPKDRKAIGCKWVFKRKQDAEGKIGKYKARLVAKGYAQIEGV 156          
BLAST of mRNA_H-elongata_contig1188.1455.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR)

HSP 1 Score: 57.4 bits (137), Expect = 7.360e-8
Identity = 30/64 (46.88%), Postives = 44/64 (68.75%), Query Frame = 0
Query:   10 WKAE-ETEMRGMVENCVYKQVARPKDKLVVGTKMLYKREVGQDDKVEKYKCRLVAQGFWQVEGV 72
            WKA    E+   V+  +Y +V RP+D+ VVG K +++ + G D ++EKYK R+VA+GF QVEGV
Sbjct:  297 WKAACAEELLTFVKAELYDEVERPRDRKVVGCKWVFRIKRGPDGEIEKYKARVVAKGFTQVEGV 360          
BLAST of mRNA_H-elongata_contig1188.1455.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A)

HSP 1 Score: 55.5 bits (132), Expect = 8.220e-8
Identity = 27/66 (40.91%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    7 DDWWKAEETEMRGMVENCVYKQVARPKDKLVVGTKMLYKREVGQDDKVEKYKCRLVAQGFWQVEGV 72
            + W  A E E+  +  N  +  V RP+ + VV  K ++KR++ +D +VE+YK RLVA+G+ QVEG+
Sbjct:   44 EKWKLAMEEELENLKRNETWDIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGI 109          
BLAST of mRNA_H-elongata_contig1188.1455.1 vs. uniprot
Match: A0A151R1B6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R1B6_CAJCA)

HSP 1 Score: 57.0 bits (136), Expect = 9.870e-8
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    1 MESLEWDDWWKAEETEMRGMVENCVYKQVARPKDKLVVGTKMLYKREVGQDD-KVEKYKCRLVAQGFWQVEGV 72
            MES E  DW KA   EM+ + +N  +K V+ P  K V+  K ++KR+ G    +  ++K RLVA+GF QVEGV
Sbjct:  403 MESSEAQDWMKAVHEEMKSLQKNLTWKLVSLPTGKKVISCKWIFKRKDGIPGVEAPRFKARLVARGFTQVEGV 475          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1188.1455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK3.020e-1147.69Integrase catalytic domain-containing protein (Fra... [more]
A0A1X7TFD5_AMPQE3.210e-950.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0J7K7I2_LASNI1.110e-843.10Retrovirus-related pol polyprotein from transposon... [more]
A0A1B5Z7Z8_TRISU5.420e-844.44Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A4Y9ZY34_9AGAM5.430e-843.08Integrase catalytic domain-containing protein n=1 ... [more]
UPI000D630AD25.470e-840.28probable LRR receptor-like serine/threonine-protei... [more]
UPI001CB79F246.160e-839.39hypothetical protein n=1 Tax=Blastococcus sp. CPCC... [more]
A0A1C7MSU6_GRIFR7.360e-846.88Retrovirus-related Pol polyprotein from transposon... [more]
UPI0015A81C6A8.220e-840.91uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A151R1B6_CAJCA9.870e-843.84Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 25..73
e-value: 3.1E-7
score: 30.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1188contigH-elongata_contig1188:13514..13735 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1188.1455.1mRNA_H-elongata_contig1188.1455.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1188 13373..13771 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1188.1455.1 ID=prot_H-elongata_contig1188.1455.1|Name=mRNA_H-elongata_contig1188.1455.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
MESLEWDDWWKAEETEMRGMVENCVYKQVARPKDKLVVGTKMLYKREVGQ
DDKVEKYKCRLVAQGFWQVEGVH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2