prot_H-elongata_contig11871.1448.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11871.1448.1
Unique Nameprot_H-elongata_contig11871.1448.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length49
Homology
BLAST of mRNA_H-elongata_contig11871.1448.1 vs. uniprot
Match: D8LTE8_ECTSI (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE8_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.550e-22
Identity = 40/48 (83.33%), Postives = 46/48 (95.83%), Query Frame = 0
Query:    1 MCAKHGIKVKYNCKQGNCATCEINIDGRYVKACQGKVPSSRRIVKIKA 48
            +CAK+GIKVKY+CKQG+CATC INIDGR VKACQG+VP+SRRIVKIKA
Sbjct:   26 LCAKNGIKVKYSCKQGDCATCSINIDGRNVKACQGRVPASRRIVKIKA 73          
BLAST of mRNA_H-elongata_contig11871.1448.1 vs. uniprot
Match: A0A835Z7N4_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7N4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 7.630e-12
Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    3 AKHGIKVKYNCKQGNCATCEINIDGRYVKACQGKV-PSSRRIVKIK 47
            AK G+KV+YNCK G CATC +N+DGR  KAC  K+ P +RR+VKIK
Sbjct:   72 AKAGVKVRYNCKAGTCATCVLNVDGRMQKACVTKLDPFTRRVVKIK 117          
BLAST of mRNA_H-elongata_contig11871.1448.1 vs. uniprot
Match: A0A7S2D671_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D671_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.830e-9
Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    2 CAKHGIKVKYNCKQGNCATCEINIDGRYVKACQGKVPSSRRIVKI 46
            C K GIKV  NCK+G+C TC +N+ G+ +KAC GKVP + ++  +
Sbjct:   79 CKKLGIKVPTNCKKGDCGTCTVNVGGKNIKACVGKVPPAPKLKSV 123          
BLAST of mRNA_H-elongata_contig11871.1448.1 vs. uniprot
Match: A0A7S2SLY0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SLY0_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 7.290e-9
Identity = 22/47 (46.81%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    2 CAKHGIKVKYNCKQGNCATCEINIDGRYVKACQGKVPSSRRIVKIKA 48
            CAK G+K +Y+CK+G+CA+C I++ G  +K C GKVP + R+  ++A
Sbjct:   62 CAKLGMKPRYSCKKGDCASCTISVGGTRIKPCVGKVPPAPRLKSLQA 108          
BLAST of mRNA_H-elongata_contig11871.1448.1 vs. uniprot
Match: A0A7S4JWQ5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JWQ5_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.160e-8
Identity = 20/35 (57.14%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    7 IKVKYNCKQGNCATCEINIDGRYVKACQGKVPSSR 41
            +K+ Y+CK+G+C TCEIN++GR VKACQG +P  +
Sbjct:   96 VKISYSCKKGDCGTCEINMNGRVVKACQGVIPKGK 130          
BLAST of mRNA_H-elongata_contig11871.1448.1 vs. uniprot
Match: A0A7R9VC32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VC32_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 7.770e-7
Identity = 19/30 (63.33%), Postives = 26/30 (86.67%), Query Frame = 0
Query:    7 IKVKYNCKQGNCATCEINIDGRYVKACQGK 36
            +K+ Y+CK+G+C TCEIN++GR VKACQ K
Sbjct:   76 VKITYSCKKGDCGTCEINMNGRVVKACQEK 105          
BLAST of mRNA_H-elongata_contig11871.1448.1 vs. uniprot
Match: A0A7S0EBW5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EBW5_9EUKA)

HSP 1 Score: 51.6 bits (122), Expect = 1.120e-6
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 MCAKHGIKVKYNCKQGNCATCEINIDGRY-VKACQG-KVP 38
            +C K GIKVK++CK G C TCE++I+GR   K CQG KVP
Sbjct:  113 VCQKAGIKVKFDCKNGRCGTCEVSINGRSKAKVCQGAKVP 152          
BLAST of mRNA_H-elongata_contig11871.1448.1 vs. uniprot
Match: A0A7S0E4F7_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E4F7_9EUKA)

HSP 1 Score: 50.8 bits (120), Expect = 1.600e-6
Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 0
Query:    6 GIKVKYNCKQGNCATCEINIDGRYVKACQGKVPSSRRIVKIK 47
            GIK+KY+C +G C TCE  +DGR  K C  K P+    +K K
Sbjct:  103 GIKIKYDCNEGTCKTCEAMVDGRKAKICVSKAPAKDVTIKYK 144          
BLAST of mRNA_H-elongata_contig11871.1448.1 vs. uniprot
Match: A0A812VY59_SYMPI (PORA protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812VY59_SYMPI)

HSP 1 Score: 50.8 bits (120), Expect = 5.230e-6
Identity = 18/36 (50.00%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    3 AKHGIKVKYNCKQGNCATCEINIDGRYVKACQGKVP 38
            A+  + ++Y CK+G C TC +NIDG++V ACQ K+P
Sbjct:  547 AQADVFIRYKCKKGECKTCAVNIDGKWVSACQTKIP 582          
BLAST of mRNA_H-elongata_contig11871.1448.1 vs. uniprot
Match: A0A7S2U7E3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7E3_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 6.170e-6
Identity = 18/33 (54.55%), Postives = 24/33 (72.73%), Query Frame = 0
Query:    7 IKVKYNCKQGNCATCEINIDGRYVKACQGKVPS 39
            +K+ YNCK G+C TC I ++GR  KACQ  +PS
Sbjct:  108 VKIPYNCKNGDCGTCMIKVNGRKAKACQMNIPS 140          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11871.1448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LTE8_ECTSI1.550e-2283.332Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A835Z7N4_9STRA7.630e-1263.042Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S2D671_9STRA3.830e-948.89Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S2SLY0_9STRA7.290e-946.81Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4JWQ5_9STRA1.160e-857.14Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7R9VC32_9STRA7.770e-763.33Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S0EBW5_9EUKA1.120e-660.00Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S0E4F7_9EUKA1.600e-647.62Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A812VY59_SYMPI5.230e-650.00PORA protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
A0A7S2U7E3_9STRA6.170e-654.55Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 4..46
e-value: 1.3E-6
score: 29.9
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 5..31
e-value: 1.2E-4
score: 22.0
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 1..48
score: 8.891
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 13..21
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 5..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11871contigH-elongata_contig11871:7005..7561 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11871.1448.1mRNA_H-elongata_contig11871.1448.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11871 6366..7880 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11871.1448.1 ID=prot_H-elongata_contig11871.1448.1|Name=mRNA_H-elongata_contig11871.1448.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=49bp
MCAKHGIKVKYNCKQGNCATCEINIDGRYVKACQGKVPSSRRIVKIKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012675Beta-grasp_dom_sf
IPR0010412Fe-2S_ferredoxin-type
IPR0060582Fe2S_fd_BS
IPR0360102Fe-2S_ferredoxin-like_sf