prot_H-elongata_contig118695.1445.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig118695.1445.1
Unique Nameprot_H-elongata_contig118695.1445.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length252
Homology
BLAST of mRNA_H-elongata_contig118695.1445.1 vs. uniprot
Match: D8LFZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFZ5_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 1.360e-106
Identity = 169/242 (69.83%), Postives = 200/242 (82.64%), Query Frame = 0
Query:    1 YKSQCLPSHVHREAAIRAVTICLGYVADLTPYLAYLFPIIMARGLQPGIFYDPELELFVHDMGEHEAYKRGRATERQDRHLPLVQSTPEDSEELRLSLCRMVGQMVVVLMNRGTIGVIRPYLDEIIIFLVTQSNDLYSAVKVEALAIFANLAVCPHLEQGMKFYAVGLARVFLPHLRHRHAKIRVAAIEALRMTVKVQDHAKVKGAGTAAIVDLVGFREDNVLPVAAFYGRGDTTVNYLAEV 242
            +K    P+   REA+I+AV + + +V DLTP+LAYLFP++MAR +  G  YDP LELFVHD  EHEAYKRGRATERQD+HLP VQ   E SEELRLSLCRMVG+M+  LM+RGTIGV+RPYLD+ I+ LV+Q  D YSAVKVEAL+I   L + PH+EQGMKFYAVG++R  LPHLRHRHAK+R+AAI+ALR+ V V D AKVKGAGT+AIVDLVGFREDNVLP+AAFYGRGDTTVNYLAE+
Sbjct:   54 FKGLADPAEACREASIKAVALFMEHVPDLTPHLAYLFPVLMARAVPAGSLYDPSLELFVHDNDEHEAYKRGRATERQDQHLPQVQHIAEGSEELRLSLCRMVGRMLGKLMDRGTIGVLRPYLDDTILLLVSQFRDPYSAVKVEALSIVTTLVLHPHVEQGMKFYAVGISRAILPHLRHRHAKVRLAAIKALRLAVMVPDRAKVKGAGTSAIVDLVGFREDNVLPIAAFYGRGDTTVNYLAEL 295          
BLAST of mRNA_H-elongata_contig118695.1445.1 vs. uniprot
Match: A0A836C9Q8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q8_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.160e-59
Identity = 133/311 (42.77%), Postives = 156/311 (50.16%), Query Frame = 0
Query:    7 PSHVHREAAIRAVTICLGYVADLTPYLAYLFPIIMARGLQPGIFYDPELE---------------LFVHDMGEHEAYKRGRATERQDRHLPLVQSTPEDSEELRLSLCRMVGQMVVVLMNRGTIGVIRPYLDEIIIFLVTQSNDLYSAVKVEALAIFANLAVCPHLEQGMKFYAVGLARVFLPHLRHRHAKIRVAAIEAL------------------------------------------------------------RMTVKVQDHAKVKGAGTAAIVDLVGFREDNVLPVAAFYGRGDTTVNYLAEV 242
            P    RE A+R     L   ADLTP+LAYLFP + ARG+ PG  +D E +               +FVHD  EHEAY+RG ATERQDR  PL     E SEELRL LCR+ G +   L  RG   V+RPY D+ ++ L  Q  D Y  +K EA      LA  P  E GM FYA GLAR  LP LRHRHA++R AA  AL                                                            R  V V D A+ KGAGT AIVDLVGFREDNV+PVA+FYGRGDT+VN LA++
Sbjct:  133 PGEGCRELALRLALALLRGAADLTPHLAYLFPALAARGVPPGAAFDAEAKRERGRLLTGGRRRCAVFVHDADEHEAYRRGVATERQDRTDPLRARVVEPSEELRLLLCRLAGGVARALSARGAAAVLRPYFDDAVLLLACQLRDPYPTLKAEACKELEWLACAPAYEAGMAFYATGLARALLPLLRHRHARVRAAAARALWKPAGSVRCDPRRGTTCVRISGAAVPQYDASSVSAREPPRHTSHRARCPLLSLIAARQLPRQVVMVPDRARCKGAGTEAIVDLVGFREDNVIPVASFYGRGDTSVNCLADL 443          
BLAST of mRNA_H-elongata_contig118695.1445.1 vs. uniprot
Match: A0A7S1XY42_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XY42_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.470e-49
Identity = 108/237 (45.57%), Postives = 139/237 (58.65%), Query Frame = 0
Query:   12 REAAIRAVTICLGYVADLTPYLAYLFPIIMARGLQPGIFYDPELELFVHDMGEHEAYKRGRATERQDRHLPLVQ-----STPEDSEELRLSLCRMVGQMVVVLMNRGTIGVIRPYLDEIIIFLVTQSNDLYSAVKVEALAIFANLAVCPHLEQGMKFYAVGLARVFLPHLRHRHAKIRVAAIEALRMTVKVQDHAKVKGAGTAAIVDLVGFREDNVLPVAAFYG-RGDTTVNYLAEV 242
            RE ++  VT+   +V DLT ++ Y FP  +   L P   YD E ++FVH++  HE +KRGRA  RQDR   L       S  + SEE+R    RM+  ++  LM RG   ++ PYL E I+FL  Q  D    VK+EA      LAV   L  G K YA+ LAR   P LRHRHA++R+AA+EA+   V ++   K KGAGT AI DL+GFR DNVLPV AFY      TVNYLAE+
Sbjct:  195 RELSVNLVTLFFCHVRDLTQHIGYFFP-ALCYYLNPDEAYDAETKVFVHNIDAHEEFKRGRAVIRQDRTHALDAASERVSVRDASEEMRYLYVRMLHTLLYELMERGAERILGPYLHETILFLQAQLRDPCPKVKMEACRALKRLAVSEVLTPGTKLYAIALARAVFPVLRHRHARVRLAAVEAVHAIVMIKQQEKCKGAGTEAIEDLIGFRADNVLPVGAFYNPESGITVNYLAEL 430          
BLAST of mRNA_H-elongata_contig118695.1445.1 vs. uniprot
Match: A0A6U2L7V1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2L7V1_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.910e-47
Identity = 99/236 (41.95%), Postives = 145/236 (61.44%), Query Frame = 0
Query:   12 REAAIRAVTICLGYVADLTPYLAYLFPIIMARGLQPGIFYDPELELFVHDMGEHEAYKRGRATERQDRHLPL----VQSTPEDSEELRLSLCRMVGQMVVVLMNRGTIGVIRPYLDEIIIFLVTQSNDLYSAVKVEALAIFANLAVCPHLEQGMKFYAVGLARVFLPHLRHRHAKIRVAAIEALRMTVKVQDHAKVKGAGTAAIVDLVGFREDNVLPVAAFY-GRGDTTVNYLAEV 242
            RE ++R  ++     +D   ++ +L   I+AR   P I YD +L++FVHDM  HE YKRG A ERQD+   L         E SEELRL LC+++  +    + RG+I ++ PYL +I++ L + S D +S VK+EA +I   L   P  E   K +++GLAR  +P+LRHR++ +R+A++      V V D  K+KGAG+ AI+DLVGFRE+NVLP+ AFY      +VN LAE+
Sbjct:  261 RELSLRCSSVLARGASDFGKHIPFLMSAILARF--PAIIYDEDLQIFVHDMKRHEEYKRGIAVERQDKENLLSGVECLQVVEKSEELRLLLCKLISSLFRGSIRRGSISMLNPYLIDIVLALHSLSRDPFSLVKIEASSILVQLMRVPQWEMCSKHFSIGLARAAIPNLRHRNSNVRLASVILFEACVCVPDREKMKGAGSEAIIDLVGFREENVLPIGAFYKSSAGVSVNTLAEL 494          
BLAST of mRNA_H-elongata_contig118695.1445.1 vs. uniprot
Match: B8C2S9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2S9_THAPS)

HSP 1 Score: 163 bits (413), Expect = 2.030e-42
Identity = 99/220 (45.00%), Postives = 132/220 (60.00%), Query Frame = 0
Query:   28 DLTPYLAYLFPIIMARGLQPGIFYDPELELFVHDMGEHEAYKRGRATERQDRHLPLVQSTP----EDSEELRLSLCRMVGQMVVVLMNRGTIGVIRPYLDEIIIFLVTQSNDLYSAVKVEALAIFANLAVCPHLEQGMKFYAVGLARVFLPHLRHRHAKIRVAAIEALRMTVKVQDHAKVKGAGTAAIVDLVGFREDNVLPVAAFYG-RGDTTVNYLAEV 242
            D+  ++ YL P + AR   P   YD +LE+FV D   HE YKRG A +RQDR   L  +      E SEELRL LCR    ++  L+ R  + ++  Y  E+I  L     D +  VKVEA  I   L    + E G KF+A G+AR  LP+ RHR+ K+ ++A++ L  +V V D AKVKGAGT+AI DLVGFRE+NVLP+AAFY  +   +VN LAE+
Sbjct:  245 DIGRHVPYLIPALAARF--PSCSYDKDLEVFVQDSQSHELYKRGGAIDRQDRDGLLAPNCSFPVIEPSEELRLELCRTFSCLLRGLLVRDAVMILDAYFPEMIYSLQASLKDPFPNVKVEACRILVQLLRVSNWELGAKFFATGIARSVLPNCRHRNTKVVISAMDLLEASVCVPDRAKVKGAGTSAISDLVGFREENVLPIAAFYDPKYSVSVNTLAEL 462          
BLAST of mRNA_H-elongata_contig118695.1445.1 vs. uniprot
Match: F0YIE1_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIE1_AURAN)

HSP 1 Score: 162 bits (411), Expect = 5.480e-42
Identity = 96/240 (40.00%), Postives = 138/240 (57.50%), Query Frame = 0
Query:    7 PSHVHREAAIRAVTICLGYVADLTPYLAYLFPIIMARGLQPGIFYDPELELFVHDMGEHEAYKRGRATERQDRHLPLVQS----TPEDSEELRLSLCRMVGQMVVVLMNRGTIGVIRPYLDEIIIFLVTQSNDLYSAVKVEALAIFANLAVCPHLEQGMKFYAVGLARVFLPHLRHRHAKIRVAAIEALRMTVKVQDHAKVKGAGTAAIVDLVGFREDNVLPVAAFYGRGDTTVNYLAEV 242
            P   HRE AIR +    G V DLTP++ Y+FP++  RG  P +  D E  +FV D+ +H A+KRG+A  R D      +     T E SEELRL LC +   ++     R    V+  YL E ++ L     D +  + ++A+     +     L+  +  YA  LARV +P+LRHRHA++R  A++A+R  V V+  AK + AG+ AI DLVGFREDNV+P A+FYGR +   NY+AE+
Sbjct:  135 PVEKHRERAIRVLNGLCGRVRDLTPHMPYVFPMLHGRG-SPAVGLDVEAGIFVFDLEDHAAFKRGKAQARPDLACAFERERTLRTREPSEELRLLLCEL---LITCTAGRAA-SVVNAYLHEAMLLLAGFCRDTFGELALKAMEGVKTICATEDLQDPLVPYAAALARVSMPNLRHRHARVRRGAVDAVRRAVAVKHVAKWRAAGSDAIADLVGFREDNVIPTASFYGR-EVRYNYVAEL 368          
BLAST of mRNA_H-elongata_contig118695.1445.1 vs. uniprot
Match: A0A7S2PXF7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PXF7_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.780e-40
Identity = 94/235 (40.00%), Postives = 136/235 (57.87%), Query Frame = 0
Query:   12 REAAIRAVTICLGYVADLTPYLAYLFPIIMARGLQPGIFYDPELELFVHDMGEHEAYKRGRATERQDRHLPLVQST---PEDSEELRLSLCRMVGQMVVVLMNRGTIGVIRPYLDEIIIFLVTQSNDLYSAVKVEALAIFANLAVCPHLEQGMKFYAVGLARVFLPHLRHRHAKIRVAAIEALRMTVKVQDHAKVKGAGTAAIVDLVGFREDNVLPVAAFY-GRGDTTVNYLAEV 242
            R  ++  +   L    DL  +L YL P I+AR       YD E+E+FV +   H+ +KRG A+ RQDR   + Q T    E +E+LRL+LC  +  +V  +M     G++ PY  E+++ L T   D +  VK+ A    A L   P  E G K++A GLAR  LP+ R+R+  + VAA++ L  ++ V D AK KGAG+AAI DLVGF+ DN +P+AAFY  +   +VN LAE+
Sbjct:  182 RRLSLECIQSLLLANIDLARHLPYLIPSIVAR--YTPCAYDKEMEVFVQNQQVHDFFKRGGASNRQDRDGLIGQVTFDVVEPNEDLRLALCHTIKCLVDSIMRMNAAGILEPYYSELVMALQTSLKDPFPEVKIAASHRLAELLRIPQFELGAKYFATGLARALLPNCRNRNTAVVVAAMDLLEASIVVPDRAKRKGAGSAAIADLVGFKADNAIPIAAFYDSQHAVSVNILAEL 414          
BLAST of mRNA_H-elongata_contig118695.1445.1 vs. uniprot
Match: A0A8J2S4Y5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4Y5_9STRA)

HSP 1 Score: 151 bits (382), Expect = 4.130e-38
Identity = 95/235 (40.43%), Postives = 136/235 (57.87%), Query Frame = 0
Query:   12 REAAIRAVTICLGYVADLTPYLAYLFPIIMARGLQPGIFYDPELELFVHDMGEHEAYKRGRATERQDRHLPLVQS----TPEDSEELRLSLCRMVGQMVVVLMNRGTIGVIRPYLDEIIIFLVTQSNDLYSAVKVEALAIFANLAVCPHLEQGMKFYAVGLARVFLPHLRHRHAKIRVAAIEALRMTVKVQDHAKVKGAGTAAIVDLVGFREDNVLPVAAFYGRGDTTVNYLAEV 242
            RE AIR +      V DL P+L YLFP++  RG  P    D E  +FV D+  ++ +KRG+AT R D      ++    + E +EELRL LC +   ++VV  NR    +I  YL E ++     + D +  V   A    + +     L++ +  YA  LAR  LP+LRHRHAK+R A ++A+R +V V++  K +GAG+ AI DLVGFREDNV+P  AFYG  +T  NY+AE+
Sbjct:  146 REKAIRLMAELCKRVKDLQPHLPYLFPVLHHRG-SPASGLDVENSVFVFDLQGYDEFKRGKATARPDLQEAFARTRLVNSGEPAEELRLQLCEL---LIVVTTNRPA-NIIGAYLHEAMLLFAGFARDTFGLVAKRAAEGISAVCSVDDLQEALIPYACALARCCLPNLRHRHAKVRKATVDAIRRSVAVRNVGKWRGAGSDAIKDLVGFREDNVIPTHAFYGP-ETRYNYVAEL 374          
BLAST of mRNA_H-elongata_contig118695.1445.1 vs. uniprot
Match: A0A7S1CDH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDH1_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.800e-35
Identity = 78/232 (33.62%), Postives = 131/232 (56.47%), Query Frame = 0
Query:   12 REAAIRAVTICLGYVADLTPYLAYLFPIIMARGLQPGIFYDPELELFVHDMGEHEAYKRGRATERQDRHL-PLVQSTPEDSEELRLSLCRMVGQMVVVLMNRGTIGVIRPYLDEIIIFLVTQSNDLYSAVKVEALAIFANLAVCPHLEQGMKFYAVGLARVFLPHLRHRHAKIRVAAIEALRMTVKVQDHAKVKGAGTAAIVDLVGFREDNVLPVAAFYGRGDTTVNYLAEV 242
            RE A+  VT  L  + D+   L Y+ P+++ R +   + YD ++ +FV  +  HE ++RGR   + D +  P      + SEE+RL+LC  V  +V      G    + PY+ ++ +   + + D +  +K+    +   L  C    +  K +AVG+ R  LP L HRHAK+R+A ++A+   +  +D AK KGAGTAAI D+VG  ++N +P+AAFY R + ++NY+A++
Sbjct:  114 RELAVLMVTRFLSVLTDVGACLPYVVPVMIERLVPADLGYDHDMNVFVKSVERHEEFRRGRVLPKGDLYNDPYATKVVDASEEVRLALCNAVIALVETTAANGAHAQLTPYILDVFLAAESAAVDPFPDLKIRGCQLIEML--CSFSAEATKVFAVGMIRAILPGLDHRHAKVRIAILDAIGALITCEDKAKCKGAGTAAIFDMVGHHDENTIPIAAFY-RHEASINYMAKL 342          
BLAST of mRNA_H-elongata_contig118695.1445.1 vs. uniprot
Match: A0A2R5GQZ3_9STRA (Dynein assembly factor 5, axonemal n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQZ3_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.330e-34
Identity = 84/231 (36.36%), Postives = 123/231 (53.25%), Query Frame = 0
Query:   12 REAAIRAVTICLGYVADLTPYLAYLFPIIMARGLQPGIFYDPELELFVHDMGEHEAYKRGRATERQDRHLPLVQSTPEDSEELRLSLCRMVGQMVVVLMNRGTIGVIRPYLDEIIIFLVTQSNDLYSAVKVEALAIFANLAVCPHLEQGMKFYAVGLARVFLPHLRHRHAKIRVAAIEALRMTVKVQDHAKVKGAGTAAIVDLVGFREDNVLPVAAFYGRGDTTVNYLAEV 242
            RE +   +T  +    DL P L YL+P +M R     IF D +    V D+  HEA +RG+A    D    L  +  E SEE+RL LC M+  +V     RG   ++ PY  + ++F    + D + A+++E + +   +A     E  M  Y   L R  +P LRHR + +++AAI  +   V      K KG GT AIVDL+GFREDNV+P+ AFY +G+T +NYL  +
Sbjct:   46 RELSAIMLTKFIARCEDLGPVLPYLYPAVMDRNSDTFIF-DLQNNEMVRDVEAHEAKQRGKAIPLPDGGTTLRHTVREPSEEVRLLLCTMLATLVRSFTRRGLHSMLGPYFHDTVMFFHACAVDPFPALRIEGMRMLQEIAQERAFENTMHHYCTALVRSLMPALRHRRSAVKIAAIRCIGALVACPYRNKCKGGGTDAIVDLMGFREDNVIPICAFY-QGETRLNYLGHL 274          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118695.1445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFZ5_ECTSI1.360e-10669.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C9Q8_9STRA1.160e-5942.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XY42_9STRA2.470e-4945.57Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U2L7V1_9STRA1.910e-4741.95Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8C2S9_THAPS2.030e-4245.00Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
F0YIE1_AURAN5.480e-4240.00Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A7S2PXF7_9STRA1.780e-4040.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A8J2S4Y5_9STRA4.130e-3840.43Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S1CDH1_9STRA4.800e-3533.62Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A2R5GQZ3_9STRA1.330e-3436.36Dynein assembly factor 5, axonemal n=1 Tax=Hondaea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR16216FAMILY NOT NAMEDcoord: 12..242
NoneNo IPR availablePANTHERPTHR16216:SF9coord: 12..242
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 11..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118695contigH-elongata_contig118695:277..1829 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118695.1445.1mRNA_H-elongata_contig118695.1445.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig118695 277..1829 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig118695.1445.1 ID=prot_H-elongata_contig118695.1445.1|Name=mRNA_H-elongata_contig118695.1445.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=252bp
YKSQCLPSHVHREAAIRAVTICLGYVADLTPYLAYLFPIIMARGLQPGIF
YDPELELFVHDMGEHEAYKRGRATERQDRHLPLVQSTPEDSEELRLSLCR
MVGQMVVVLMNRGTIGVIRPYLDEIIIFLVTQSNDLYSAVKVEALAIFAN
LAVCPHLEQGMKFYAVGLARVFLPHLRHRHAKIRVAAIEALRMTVKVQDH
AKVKGAGTAAIVDLVGFREDNVLPVAAFYGRGDTTVNYLAEVGIRCPIPT
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold