prot_H-elongata_contig118278.1410.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig118278.1410.1
Unique Nameprot_H-elongata_contig118278.1410.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length46
Homology
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BLAST of mRNA_H-elongata_contig118278.1410.1 vs. uniprot
Match: D7FK49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK49_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 4.130e-16
Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = 0 
Query:    1 DGLVARGAAFATTGRLRQVTQDLSRALSLNPQNDNASSYLQETRR 45
            DGLVARGAAFATTGRLRQ  QDLSRALS+NPQN NASSYL+ETRR
Sbjct:  317 DGLVARGAAFATTGRLRQAVQDLSRALSVNPQNGNASSYLKETRR 361
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118278.1410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK49_ECTSI4.130e-1688.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..33
score: 9.328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118278contigH-elongata_contig118278:8..145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118278.1410.1mRNA_H-elongata_contig118278.1410.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig118278 8..145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig118278.1410.1 ID=prot_H-elongata_contig118278.1410.1|Name=mRNA_H-elongata_contig118278.1410.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=46bp
DGLVARGAAFATTGRLRQVTQDLSRALSLNPQNDNASSYLQETRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom