prot_H-elongata_contig11826.1408.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11826.1408.1
Unique Nameprot_H-elongata_contig11826.1408.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length652
Homology
BLAST of mRNA_H-elongata_contig11826.1408.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI)

HSP 1 Score: 571 bits (1471), Expect = 1.350e-180
Identity = 362/705 (51.35%), Postives = 438/705 (62.13%), Query Frame = 0
Query:    2 TERLTSWASNSSNGS--IKSGASNRLSTSFLASIAAGANGGGGNGAMVGESPRSSV---STSSGRNARRKIARGLKILGVSRR----------TTIDSEGSVGFDDRDAGITRGVGMRE----EYDDRGHAEDDD-------------------ADDVDLSEWDVTRLNKRPSEPRYMVQLRQRSTGSFLVLGTADPLLFEEWVADILYVQQRTLALEWNKRFRLKISRNPAPPLSSFLFLPDRDWNREWEAACSLTAAGKGGRDARLTIALGQQFRAFAGAVAGAVLRMNQQQA----------GVGWEEVVRPLQSLRPSLEELEDDVHGAVG-FVASVRETISDATPDGCQAFLVGSVAFVIAPRGLGSGYKTHKRLGAELKGTHILRRAVERRLLSGVSGGGGGSSGEVNALAPLSCVLDLHGCRAAAIALPAFRSRRESKRKMRTRMQLLGDNGFGVGGVNMRSGASVAGTDRRSLIVETVAGLLECGRESVASIDIEAHGFELLFNAEATVPLAPSSAVMTMVGVGAGGGGVENSGDSIPS------ALALNRRASFLVGKKVVGDAVVVLVDGGMEHGAAGSGDIEGDTSANRDRRCNPLRLREELLRKRSRKERDTSRFLGVGSKAAELAGEGSKLIVGTLLPRLAGRVASDALASGANLLGHSEELRPPLFLFEGGHLCAAMHGAGINLRYLPMVR 651
            TE +T+WASNSSN S  ++SGAS+RL++ F+A+                          STS       KI +GLK +G SRR          +  D EGS  FD+R      G   R+    + + RG    DD                   ADDVDL+EW+++R+ KR  + RY+VQLRQ S+GSFL+LGT D LL+EEWV DILYVQQRTLALEW +RFR K+S++ +PPLS+F  LPDRDWNREWEAACSLT  G+GGRDAR+TIALGQQFRAFAGAVAGA +R + +Q             GWE     L  LRP   E ED  +G        VR  +S +TPD C +FL+G+VAFV+APRG G GYKTHKRLGAELKG  +LRRAVERR+LSGV  GG G    VNALAPLSCV+DL+G RAAA+ALPAF  R +SK+K+R R +LLG     +       GA  AGTDR SL+VE V+ LLECGRESVAS  + +HG +L +N +        +A                             A   N RAS L G+++VGDAVVVLV GGM HGAAGSGD++GD  AN DR CNPLRLREEL+R+R +  R +        KAA   G GS L+  TLLPRLAGR+ASDAL  G+  L  SEE  PPLFLF+GGHLCAAMHGAGINLRYLPM+R
Sbjct:  119 TEGMTTWASNSSNTSSNMRSGASSRLASGFMAAXXXXXXXXXXXXXXXXXXXXXXXXXXSTSGSAEKWNKIVKGLKRMGPSRRGGKGXXXXXXSLGDGEGSATFDERGEETEEGFAARKVSLFDEEGRGGGRRDDRDSCYDXXXXXXXXXXXXXADDVDLAEWEISRVGKRAGDARYVVQLRQPSSGSFLLLGTTDALLYEEWVEDILYVQQRTLALEWTRRFRSKMSKDSSPPLSAFKLLPDRDWNREWEAACSLTGGGRGGRDARVTIALGQQFRAFAGAVAGAAMRASLRQRQQSSWPSPSQDEGWES----LAPLRPM--EAEDKANGGGDTHTGDVRAALSRSTPDDCWSFLMGNVAFVLAPRGPGGGYKTHKRLGAELKGAQVLRRAVERRVLSGVGSGGAGPE-LVNALAPLSCVVDLYGFRAAAVALPAFMPRTKSKQKLRARPKLLGGK---IEKEGEGDGAGAAGTDRASLVVEAVSALLECGRESVASACMLSHGLDLYYNKDVEAEAGDGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGTNERASGLAGRRIVGDAVVVLVGGGMGHGAAGSGDVDGDGEANGDRTCNPLRLREELMRERMQP-RPSIEAPSEAVKAAVERGGGSALLSETLLPRLAGRLASDALMGGSVPLARSEERSPPLFLFDGGHLCAAMHGAGINLRYLPMLR 812          
BLAST of mRNA_H-elongata_contig11826.1408.1 vs. uniprot
Match: A0A6H5L4V6_9PHAE (Clu domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V6_9PHAE)

HSP 1 Score: 389 bits (998), Expect = 1.820e-118
Identity = 295/768 (38.41%), Postives = 365/768 (47.53%), Query Frame = 0
Query:   66 KIARGLKILGVSRR----------TTIDSEGSVGFDDRDAGITRGVGMREE--YDDRGHAEDDD--------------------ADDVDLSEWDVTRLNKRPSEPRYMVQLRQRSTGSFLVLGTADPLLFEEWVADILYVQQRTLALEWNKRFRLKISRNPAPPLSSFLFLPDRDWNREWEAACSLTAAGKGGRDARLTIALGQQFRAFAGAVAGAVLRMNQQQA--------GVGWEEVVRPLQSLRPSLEELEDDVHGAVGF-VASVRETISDATPDGCQAFLVGSVAFVIAPRGLGSGYKTHKRLGAELKGTHILRRAVERRLLSGVSGGGGGSSGEVNALAPLSCVLDLHGCRAAAIALPAFRSRRESKRKMRTRMQLLGD---------------------------------------------------------------------------------------------NGFGVGG-------------------------------VNMRSGAS--------------------------------------------------------------VAGTDRRSLIVETVAGLLECGRESVASIDIEAHGFELLFNAEATVPLAPSSAVMTMVG-----VGAGGGGVENSGDSIPSALALNRRASFLVGKKVVGDAVVVLVDGGMEHGAAGSGDIEGDTSANRDRRCNPLRLREELLRKRSRKERDTSRFLGVGSKAAELAGEGSKLIVGTLLPRLAG 601
            KI +GLK +G SRR          +  D EGS  FD+R      G   R+   +D+ G                          ADDVDL+EW+++R+ KR  + RY+VQLRQ S+GSFL+LGT D LL+EEWV DIL     TL+LEW +RFR K+S++ +PPLS+F  LPDRDWNREWEAACSLT  G+GGRD R+TIALGQQFRAFAGAVAGA +R + +Q           GWE +  PL+S+     E ED  +G        VR  +S +TPD C +FL+G+VAFV+APRG G GYKTHKRLGAELKG  +LRRAVERR+ SGV  GG G    VNALAPLSCVLDL+G RAAA+ALPAF  R +SK+K+R R +LLG                                                                                              +G G G                                V  +  AS                                                               AGTDR SL+VE V+ LLEC RESVAS  + +HG +L +N +         AV + +                       A   N RAS L G++++GDAVVVLV GGM HGAAGSGD++GD +AN DR CNPLRLREEL+R+R +  R +        KAA   G GS L+  TLLPRLAG
Sbjct:  354 KIVKGLKRMGPSRRVGKGGRGMGGSLGDGEGSATFDERGEETEEGFAARKGSLFDEEGRGXXXXXXXXXXXXXXXXXXXXXXXXADDVDLAEWELSRVGKRAGDARYVVQLRQPSSGSFLLLGTTDALLYEEWVEDIL-----TLSLEWTRRFRSKMSKDSSPPLSAFKLLPDRDWNREWEAACSLTGGGRGGRDPRVTIALGQQFRAFAGAVAGAAMRASLRQRQHSSSPSQDEGWESLA-PLRSM-----EAEDKANGGGDTRTGDVRAALSRSTPDDCWSFLMGNVAFVLAPRGPGGGYKTHKRLGAELKGAQVLRRAVERRVRSGVGSGGTGPE-LVNALAPLSCVLDLYGFRAAAVALPAFMPRTKSKQKLRARPKLLGTISWTFSSIHGLDGGDSPDAKWGYDDVRKLISQQIGLSKAENPHLSIARGVLSGDGKIRESDVEEGKDPSSSPPATMVLFPDLLPPENVLLARLSGAGAGPGTSXXXXXXXXXXXXXEPVAVWGAEDVVRAVVLPQDSASRVHAYETLDLAVAAAAXXXXXAERAAEMGDVDRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXAAGTDRASLVVEAVSALLECSRESVASACMLSHGLDLYYNKDVEAGAEDGLAVASSLDGXXXXXXXXXXXXXXXXXXXXXAPVTNERASGLAGRRIMGDAVVVLVGGGMGHGAAGSGDVDGDGAANGDRTCNPLRLREELMRERMQP-RPSIEEPSEAVKAAVERGGGSALLSETLLPRLAG 1108          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11826.1408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS90_ECTSI1.350e-18051.35eIF3_p135 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L4V6_9PHAE1.820e-11838.41Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11826contigH-elongata_contig11826:949..8383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11826.1408.1mRNA_H-elongata_contig11826.1408.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11826 949..8383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11826.1408.1 ID=prot_H-elongata_contig11826.1408.1|Name=mRNA_H-elongata_contig11826.1408.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=652bp
MTERLTSWASNSSNGSIKSGASNRLSTSFLASIAAGANGGGGNGAMVGES
PRSSVSTSSGRNARRKIARGLKILGVSRRTTIDSEGSVGFDDRDAGITRG
VGMREEYDDRGHAEDDDADDVDLSEWDVTRLNKRPSEPRYMVQLRQRSTG
SFLVLGTADPLLFEEWVADILYVQQRTLALEWNKRFRLKISRNPAPPLSS
FLFLPDRDWNREWEAACSLTAAGKGGRDARLTIALGQQFRAFAGAVAGAV
LRMNQQQAGVGWEEVVRPLQSLRPSLEELEDDVHGAVGFVASVRETISDA
TPDGCQAFLVGSVAFVIAPRGLGSGYKTHKRLGAELKGTHILRRAVERRL
LSGVSGGGGGSSGEVNALAPLSCVLDLHGCRAAAIALPAFRSRRESKRKM
RTRMQLLGDNGFGVGGVNMRSGASVAGTDRRSLIVETVAGLLECGRESVA
SIDIEAHGFELLFNAEATVPLAPSSAVMTMVGVGAGGGGVENSGDSIPSA
LALNRRASFLVGKKVVGDAVVVLVDGGMEHGAAGSGDIEGDTSANRDRRC
NPLRLREELLRKRSRKERDTSRFLGVGSKAAELAGEGSKLIVGTLLPRLA
GRVASDALASGANLLGHSEELRPPLFLFEGGHLCAAMHGAGINLRYLPMV
R*
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