prot_H-elongata_contig118073.1396.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig118073.1396.1
Unique Nameprot_H-elongata_contig118073.1396.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
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BLAST of mRNA_H-elongata_contig118073.1396.1 vs. uniprot
Match: D8LR89_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR89_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 9.250e-25
Identity = 51/73 (69.86%), Postives = 59/73 (80.82%), Query Frame = 0 
Query:    3 QVEGLKAQMCQALLANLDHDNSCAVFAAADNYQCDELKEQAFSRIVQHFALAARSEGWAALTKGQLSEVRLSD 75
            QVEGLK QMC AL  +L HDN+C+VFA AD++QC  LK +AFS+IVQHFALA RS+GW ALTK QLSEV  SD
Sbjct:  213 QVEGLKDQMCDALSTHLTHDNACSVFALADSHQCHTLKTEAFSKIVQHFALATRSDGWTALTKDQLSEVLSSD 285
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BLAST of mRNA_H-elongata_contig118073.1396.1 vs. uniprot
Match: A0A6H5LQ32_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ32_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 2.900e-23
Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 0 
Query:    3 QVEGLKAQMCQALLANLDHDNSCAVFAAADNYQCDELKEQAFSRIVQHFALAARSEGWAALTKGQLSEV 71
            QVEGLK QMC AL  +L HDN+C+VFA AD++QC  LK +AFS+IVQHFALA RS+GW AL K QLSEV
Sbjct:  308 QVEGLKDQMCDALSTHLTHDNACSVFALADSHQCHTLKAEAFSKIVQHFALATRSDGWTALNKDQLSEV 376
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118073.1396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LR89_ECTSI9.250e-2569.86BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LQ32_9PHAE2.900e-2369.57BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011705BTB/Kelch-associatedPFAMPF07707BACKcoord: 25..71
e-value: 5.3E-6
score: 26.5
NoneNo IPR availableGENE3D1.25.40.420coord: 18..72
e-value: 4.2E-9
score: 38.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118073contigH-elongata_contig118073:1175..1402 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118073.1396.1mRNA_H-elongata_contig118073.1396.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig118073 1175..1405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig118073.1396.1 ID=prot_H-elongata_contig118073.1396.1|Name=mRNA_H-elongata_contig118073.1396.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
MEQVEGLKAQMCQALLANLDHDNSCAVFAAADNYQCDELKEQAFSRIVQH
FALAARSEGWAALTKGQLSEVRLSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011705BACK