prot_H-elongata_contig11800.1395.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11800.1395.1
Unique Nameprot_H-elongata_contig11800.1395.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length229
Homology
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BLAST of mRNA_H-elongata_contig11800.1395.1 vs. uniprot
Match: A0A6H5KD03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD03_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 1.380e-58
Identity = 98/121 (80.99%), Postives = 107/121 (88.43%), Query Frame = 0 
Query:  108 GYALSSFEQINKPRPCWEVAAEVVAKGASMPKKRLVPLLRELCIRIGDNAICDGAFFGALLEILRSAKDGDWDGKAVRLVHFFVRGMITVQGDTEGRALGSSWEGRSITLAQILQAVECFR 228
            GYA+SS+E +N+PR  W VAAEVVAKGA+MPKKRLVPLLRELCIRIGD  +CDGAFFGALL IL SAK+GDWDGKAVRLVHFFVRGM+TVQGDTEGR LGS WEGR IT  QIL A+ECFR
Sbjct:   76 GYAISSYELVNRPRAYWTVAAEVVAKGATMPKKRLVPLLRELCIRIGDYTVCDGAFFGALLVILGSAKEGDWDGKAVRLVHFFVRGMVTVQGDTEGRVLGSHWEGRGITQRQILDAIECFR 196
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BLAST of mRNA_H-elongata_contig11800.1395.1 vs. uniprot
Match: D7FJG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJG9_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 1.150e-43
Identity = 77/92 (83.70%), Postives = 83/92 (90.22%), Query Frame = 0 
Query:  137 MPKKRLVPLLRELCIRIGDNAICDGAFFGALLEILRSAKDGDWDGKAVRLVHFFVRGMITVQGDTEGRALGSSWEGRSITLAQILQAVECFR 228
            MPKKRLVPLLRELCIRIGD  +CDGAFFGALL ILRSAK+GDWDGKAVRLVHFFVRGM+TVQGDTEGR LGS WEGR I+  QI+ A+ECFR
Sbjct:    1 MPKKRLVPLLRELCIRIGDYTVCDGAFFGALLVILRSAKEGDWDGKAVRLVHFFVRGMVTVQGDTEGRVLGSHWEGRGISPRQIIDAIECFR 92
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11800.1395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KD03_9PHAE1.380e-5880.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJG9_ECTSI1.150e-4383.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11800contigH-elongata_contig11800:3988..8168 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11800.1395.1mRNA_H-elongata_contig11800.1395.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11800 3988..8189 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11800.1395.1 ID=prot_H-elongata_contig11800.1395.1|Name=mRNA_H-elongata_contig11800.1395.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp
MPNPPNISSERSKSKHRPPPSPATAQSRRSLVGGGGWGRVRALGSFPSGL
TRSPSSSDLEGSHGGPFKHSLQVVGGSLTLRKLGGNANGNGEGGGGADDD
AKNGGRYGYALSSFEQINKPRPCWEVAAEVVAKGASMPKKRLVPLLRELC
IRIGDNAICDGAFFGALLEILRSAKDGDWDGKAVRLVHFFVRGMITVQGD
TEGRALGSSWEGRSITLAQILQAVECFR*
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