prot_H-elongata_contig117845.1386.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig117845.1386.1
Unique Nameprot_H-elongata_contig117845.1386.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length224
Homology
BLAST of mRNA_H-elongata_contig117845.1386.1 vs. uniprot
Match: A0A6H5K5M3_9PHAE (S1 motif domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M3_9PHAE)

HSP 1 Score: 405 bits (1042), Expect = 8.720e-141
Identity = 207/223 (92.83%), Postives = 218/223 (97.76%), Query Frame = 0
Query:    1 QQGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSKKVSWPLYKKYGHAYDAFKLTLQDEEDVFVGLDIDDETKRAMITNIKRRLAPQPSKVRADVEVTCYTYEGIDAVKAALMAGKAVGDERTPIQIKLIAPPRYVMDTMTSDKDLGKSVLEKAIDVVTHNIVAAGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPEDV 223
            ++GYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLS KVSWPLYKKYGHA+DAFKLTLQDEEDVFVGLDID+ETK+AMIT+IKRRLAPQPSKVRAD+EVTCYTYEGIDAVKAAL+AGKAVGDERTPIQIKLIAPPRYVMDTMT DKDLGKSVLEKAI+VVT  I+ +GGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPEDV
Sbjct:  109 EKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSTKVSWPLYKKYGHAFDAFKLTLQDEEDVFVGLDIDEETKQAMITHIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQIKLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPEDV 331          
BLAST of mRNA_H-elongata_contig117845.1386.1 vs. uniprot
Match: A0A835YGW1_9STRA (Eukaryotic translation initiation factor 2 alpha subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGW1_9STRA)

HSP 1 Score: 318 bits (816), Expect = 1.420e-106
Identity = 158/227 (69.60%), Postives = 191/227 (84.14%), Query Frame = 0
Query:    1 QQGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSKKVSWPLYKKYGHAYDAFKLTL----QDEEDVFVGLDIDDETKRAMITNIKRRLAPQPSKVRADVEVTCYTYEGIDAVKAALMAGKAVGDERTPIQIKLIAPPRYVMDTMTSDKDLGKSVLEKAIDVVTHNIVAAGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPEDV 223
            ++GYIDLSKRRVSPED+AKCEDRYNKAKAVHS+LRHVA+LRG  +EDL  +V WPL ++YG A+DAFKL L    ++E DVF GLD+DD T+ ++IT I+RRLAPQP K+R D+E+TCYTYEG+DA++ +L AG  VG+E   I+IKLIAPPRY +DTMT DKD GK+ LEKAI+V+T  I   GG+LEVK+APKAVSQREESEL AM+ERLALENEEIDGDAPEDV
Sbjct:   95 EKGYIDLSKRRVSPEDIAKCEDRYNKAKAVHSILRHVAELRGASVEDLYTRVGWPLQRRYGSAHDAFKLCLAGGEEEENDVFAGLDVDDNTRASLITYIRRRLAPQPIKIRGDIEITCYTYEGVDAIRESLQAGIDVGNEDMVIKIKLIAPPRYTIDTMTLDKDAGKAALEKAIEVITARIAEKGGRLEVKLAPKAVSQREESELAAMMERLALENEEIDGDAPEDV 321          
BLAST of mRNA_H-elongata_contig117845.1386.1 vs. uniprot
Match: A0A6U2GSC0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2GSC0_9STRA)

HSP 1 Score: 288 bits (737), Expect = 2.460e-94
Identity = 142/228 (62.28%), Postives = 181/228 (79.39%), Query Frame = 0
Query:    1 QQGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSKKVSWPLYKKYGHAYDAFKLTLQDE------EDVFVGLDIDDETKRAMITNIKRRLAPQPSKVRADVEVTCYTYEGIDAVKAALMAGKAVGDERTPIQIKLIAPPRYVMDTMTSDKDLGKSVLEKAIDVVTHNIVAAGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPED 222
            ++GYIDLSKRRVSPED+  CEDR+NKAKAVH VLRH+A+ R L LEDL +++ WPLYKKYGHAYDAFKL L DE      ED F  + + D+ K  +   I+RRLAPQP K+R+D+EV+C+TYEGIDA++ AL AG   G E TPI++KLIAPP YV+ TMT +KD G ++L ++IDV+   I A GGK++VKMAPKAVS +EE+ELQAM++RLALENEE+DGDAP++
Sbjct:  111 EKGYIDLSKRRVSPEDITACEDRFNKAKAVHGVLRHLAERRKLYLEDLYERIGWPLYKKYGHAYDAFKLALADEAAPGTVEDPFADVAVPDDLKDELKAYIRRRLAPQPIKIRSDIEVSCFTYEGIDAIREALFAGIDCGTENTPIKVKLIAPPIYVLSTMTLEKDAGIALLNRSIDVIRERITAKGGKMDVKMAPKAVSLKEETELQAMMDRLALENEEVDGDAPDE 338          
BLAST of mRNA_H-elongata_contig117845.1386.1 vs. uniprot
Match: A0A7S2XWK8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWK8_9STRA)

HSP 1 Score: 286 bits (733), Expect = 7.940e-94
Identity = 143/218 (65.60%), Postives = 179/218 (82.11%), Query Frame = 0
Query:    1 QQGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSKKVSWPLYKKYGHAYDAFKLTLQDEEDVFVGLDIDDETKRAMITNIKRRLAPQPSKVRADVEVTCYTYEGIDAVKAALMAGKAVGDERTPIQIKLIAPPRYVMDTMTSDKDLGKSVLEKAIDVVTHNIVAAGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGD 218
            ++GYIDLSKRRVSPEDV KCEDRYNKAKAVHSVLRHVA+ + LVLEDL ++V WPLY  Y H YDAFK+ L  ++DVF GLD+ DE K  ++T I+R+LAPQP K+RAD+EVTC+TYEGI+AV++AL AG+A+G  + PI+I+LIAPP YVM  MT +KD G  +L ++I+ V   + + GG +EVKMAPKAVSQREESELQAM+ERLA+EN E+DGD
Sbjct:  113 EKGYIDLSKRRVSPEDVVKCEDRYNKAKAVHSVLRHVAEKKALVLEDLYRRVGWPLYTSYKHCYDAFKVALV-QDDVFNGLDVPDEIKTELLTYIRRKLAPQPIKIRADIEVTCFTYEGIEAVRSALQAGQALGSAQEPIKIRLIAPPMYVMTCMTLEKDSGIELLNQSINAVREALESKGGTMEVKMAPKAVSQREESELQAMMERLAVENAELDGD 329          
BLAST of mRNA_H-elongata_contig117845.1386.1 vs. uniprot
Match: A0A482S3R4_9ARCH (S1 RNA-binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S3R4_9ARCH)

HSP 1 Score: 280 bits (717), Expect = 3.010e-92
Identity = 143/227 (63.00%), Postives = 177/227 (77.97%), Query Frame = 0
Query:    1 QQGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSKKVSWPLYKKYGHAYDAFKLTLQDEE----DVFVGLDIDDETKRAMITNIKRRLAPQPSKVRADVEVTCYTYEGIDAVKAALMAGKAVGDERTPIQIKLIAPPRYVMDTMTSDKDLGKSVLEKAIDVVTHNIVAAGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPEDV 223
            ++GYIDLSKRRV PEDV KCE+RYNKAKAVHSVLR+VA+++ + LE L +++ WPLY+KYGHAYDAFK+ L ++     D+F  L+ D E K A++  IKRRLAPQP KVRAD+EVTC+TYEGIDA+KAAL AG+        ++IKLIAPP YVM  MT DK++G  V+  AI+ +   I A GG L+VKMAPKAV+ REESELQAML+RLALE EE+DGDAPED 
Sbjct:   46 EKGYIDLSKRRVDPEDVVKCEERYNKAKAVHSVLRYVAEVKKIKLETLYQQIGWPLYRKYGHAYDAFKMALSNDYQHGGDIFQDLEADPEVKSAVLAYIKRRLAPQPVKVRADIEVTCFTYEGIDAIKAALAAGEQKSTADNVVRIKLIAPPMYVMTMMTLDKEVGVEVMNLAIEAIGAEIRARGGSLDVKMAPKAVTLREESELQAMLDRLALEQEEVDGDAPEDA 272          
BLAST of mRNA_H-elongata_contig117845.1386.1 vs. uniprot
Match: A0A448YZU6_9STRA (S1 motif domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZU6_9STRA)

HSP 1 Score: 282 bits (721), Expect = 5.400e-92
Identity = 139/225 (61.78%), Postives = 178/225 (79.11%), Query Frame = 0
Query:    1 QQGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSKKVSWPLYKKYGHAYDAFKLTLQDEEDV---FVGLDIDDETKRAMITNIKRRLAPQPSKVRADVEVTCYTYEGIDAVKAALMAGKAVGDERTPIQIKLIAPPRYVMDTMTSDKDLGKSVLEKAIDVVTHNIVAAGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPED 222
            ++GYIDLSKRRVSPEDV  CE+R+NKAK VH VLRH+A+ R   LEDL +K+ WPLYKKYGHAYDAFKL + +E+D    F  LD+  + K  + + I RRLAPQP K+R+D+EV+C+TYEGIDA++ AL AG  +G E+ PI+IKLIAPP YV+ T T +K++G  +L +AI+V+   I A GGK++VKMAPKAVS +EESELQ M++RLALENEE+DGDAPED
Sbjct:  108 EKGYIDLSKRRVSPEDVQACEERFNKAKTVHGVLRHLAERRKYFLEDLYEKIGWPLYKKYGHAYDAFKLAISEEKDAGDPFAELDVPQDLKDELKSYILRRLAPQPIKIRSDIEVSCFTYEGIDAIREALFAGMTLGTEQNPIKIKLIAPPIYVLSTTTLEKEVGIGLLNQAIEVIKEKITAKGGKIDVKMAPKAVSVKEESELQEMMDRLALENEEVDGDAPED 332          
BLAST of mRNA_H-elongata_contig117845.1386.1 vs. uniprot
Match: B8C817_THAPS (Eukaryotic translation initiation factor 2 alpha subunit n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8C817_THAPS)

HSP 1 Score: 280 bits (717), Expect = 2.560e-91
Identity = 140/229 (61.14%), Postives = 178/229 (77.73%), Query Frame = 0
Query:    3 GYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSKKVSWPLYKKYGHAYDAFKLTLQDE---------EDVFVGLDIDDETKRAMITNIKRRLAPQPSKVRADVEVTCYTYEGIDAVKAALMAGKAVGDERTPIQIKLIAPPRYVMDTMTSDKDLGKSVLEKAIDVVTHNIVAAGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPED 222
            GYIDLSKRRVSPEDVA CED++NKAKAVH VLRH+AD R   LEDL ++++WPLY+KYGHAYDAFK+ L DE          D F  LD+  +    +   I+RRLAPQP K+RADVEV+C+TY+GIDA++ AL AG AVG E +PI+I+LIAPP YV+ TMT +K+ G ++L+K+IDV+   I A GGK++VKMAPKAVS +EE+ELQAM+ERL LEN E++GD PE+
Sbjct:  109 GYIDLSKRRVSPEDVAACEDKFNKAKAVHGVLRHLADRRKFYLEDLCERIAWPLYRKYGHAYDAFKIALADEAASGGEAAENDPFTSLDVPPDVIEELKLYIRRRLAPQPIKIRADVEVSCFTYDGIDAIRDALFAGIAVGTENSPIKIRLIAPPIYVLSTMTLEKEAGIALLQKSIDVILEKISAKGGKMDVKMAPKAVSLKEETELQAMMERLELENREVEGDEPEE 337          
BLAST of mRNA_H-elongata_contig117845.1386.1 vs. uniprot
Match: A0A7S1DAC6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAC6_CYCTE)

HSP 1 Score: 276 bits (706), Expect = 5.930e-91
Identity = 136/223 (60.99%), Postives = 176/223 (78.92%), Query Frame = 0
Query:    3 GYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSKKVSWPLYKKYGHAYDAFKLTLQDEE---DVFVGLDIDDETKRAMITNIKRRLAPQPSKVRADVEVTCYTYEGIDAVKAALMAGKAVGDERTPIQIKLIAPPRYVMDTMTSDKDLGKSVLEKAIDVVTHNIVAAGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPED 222
            GYIDLSKRRVSPEDVA CEDR+NKAKAVH VLRH+A+ R L LEDL +++ WPLY+KYGHAYDAFKL + D+    D F  +D+ ++    +   I+RRLAPQP K+R+D+EV+C+TYEGIDA++ AL AG A   +   I+IKLIAPP YV+ TMT +K++G ++L+ AIDV+   I   GGKL+VKMAPKAVS +EE+ELQAM++RLA+ENEE+DGD PE+
Sbjct:   23 GYIDLSKRRVSPEDVAACEDRFNKAKAVHGVLRHLAERRKLYLEDLYERIGWPLYRKYGHAYDAFKLAIADDHGAVDPFADIDVPEDLLDELKAYIRRRLAPQPIKIRSDIEVSCFTYEGIDAIREALFAGMAKSTDSMQIKIKLIAPPIYVLSTMTLEKEVGIALLQDAIDVIEQKITQKGGKLDVKMAPKAVSLKEETELQAMMDRLAIENEEVDGDEPEE 245          
BLAST of mRNA_H-elongata_contig117845.1386.1 vs. uniprot
Match: A0A7S2BW88_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BW88_9STRA)

HSP 1 Score: 277 bits (708), Expect = 6.900e-90
Identity = 140/222 (63.06%), Postives = 176/222 (79.28%), Query Frame = 0
Query:    1 QQGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSKKVSWPLYKKYGHAYDAFKLTLQDEEDVFVGL-DIDDETKRAMITNIKRRLAPQPSKVRADVEVTCYTYEGIDAVKAALMAGKAVGDERTPIQIKLIAPPRYVMDTMTSDKDLGKSVLEKAIDVVTHNIVAAGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPE 221
            ++GYIDLSKRRV PE + +CE++YNK+KAV+ VLR VA+ +GL+L++L + V WPLYKKYGHAYDAFKL L D+ED+F  L D+D ET   +   IK+RLAPQP K+RAD+EVTC+TYEGIDAVK +L+AG A+G + +PI+IKLIAPP YV+ T T DKDLG   L KAI+VVT  I   GGK++VKMAPKAVSQREE+EL  ++E+LA E EE DGD  E
Sbjct:  116 EKGYIDLSKRRVDPEQITQCEEKYNKSKAVYRVLRQVAEKQGLILKELYRSVGWPLYKKYGHAYDAFKLCLTDQEDIFKDLPDLDPETVTVLTDYIKKRLAPQPVKIRADIEVTCFTYEGIDAVKESLLAGVALGTKDSPIKIKLIAPPMYVVTTSTLDKDLGIDALNKAIEVVTAKITEKGGKIDVKMAPKAVSQREEAELAKLMEQLAAEAEEEDGDXXE 337          
BLAST of mRNA_H-elongata_contig117845.1386.1 vs. uniprot
Match: A0A7S2U866_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U866_9STRA)

HSP 1 Score: 276 bits (706), Expect = 1.110e-89
Identity = 145/227 (63.88%), Postives = 177/227 (77.97%), Query Frame = 0
Query:    1 QQGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSKKVSWPLYKKYGHAYDAFKLTLQDE----EDVFVGLD-IDDETKRAMITNIKRRLAPQPSKVRADVEVTCYTYEGIDAVKAALMAGKAVGDERTPIQIKLIAPPRYVMDTMTSDKDLGKSVLEKAIDVVTHNIVAAGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPED 222
            ++GYIDLSKRRVSPEDVA CEDRYNKAKAVH VLRH+A+ R L LE+L +++ WPLYKKYGHAYDAFKL L D+    ED F  L  I  E    +   IKRRLAPQP K+R+D+EV+C+TYEGIDA++ AL AG A+  E + I+IKLIAPP YV+ TMT +KD G ++L KA + +   I   GGK+EVKMAPKAVS +EE+ELQAM++RLALENEE+DGDAPED
Sbjct:  109 EKGYIDLSKRRVSPEDVAACEDRYNKAKAVHGVLRHLAERRKLYLEELYERIGWPLYKKYGHAYDAFKLALVDDVTSSEDPFAELSGIPPELVDELKLYIKRRLAPQPIKIRSDIEVSCFTYEGIDAIREALFAGMALSTESSQIKIKLIAPPIYVLSTMTLEKDAGIALLTKANETILDIITKKGGKMEVKMAPKAVSIKEETELQAMMDRLALENEEVDGDAPED 335          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117845.1386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5M3_9PHAE8.720e-14192.83S1 motif domain-containing protein n=1 Tax=Ectocar... [more]
A0A835YGW1_9STRA1.420e-10669.60Eukaryotic translation initiation factor 2 alpha s... [more]
A0A6U2GSC0_9STRA2.460e-9462.28Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2XWK8_9STRA7.940e-9465.60Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482S3R4_9ARCH3.010e-9263.00S1 RNA-binding domain-containing protein n=1 Tax=a... [more]
A0A448YZU6_9STRA5.400e-9261.78S1 motif domain-containing protein n=1 Tax=Pseudo-... [more]
B8C817_THAPS2.560e-9161.14Eukaryotic translation initiation factor 2 alpha s... [more]
A0A7S1DAC6_CYCTE5.930e-9160.99Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2BW88_9STRA6.900e-9063.06Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2U866_9STRA1.110e-8963.88Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 194..214
IPR024055Translation initiation factor 2, alpha subunit, C-terminalGENE3D3.30.70.1130coord: 104..223
e-value: 1.1E-38
score: 133.7
IPR024055Translation initiation factor 2, alpha subunit, C-terminalSUPERFAMILY110993eIF-2-alpha, C-terminal domaincoord: 102..218
IPR011488Translation initiation factor 2, alpha subunitPFAMPF07541EIF_2_alphacoord: 49..159
e-value: 3.7E-38
score: 130.2
IPR011488Translation initiation factor 2, alpha subunitPANTHERPTHR10602EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1coord: 2..222
IPR024054Translation initiation factor 2, alpha subunit, middle domain superfamilyGENE3D1.10.150.190coord: 13..98
e-value: 6.8E-31
score: 108.2
IPR024054Translation initiation factor 2, alpha subunit, middle domain superfamilySUPERFAMILY116742eIF2alpha middle domain-likecoord: 12..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig117845contigH-elongata_contig117845:630..1612 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig117845.1386.1mRNA_H-elongata_contig117845.1386.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig117845 630..1612 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig117845.1386.1 ID=prot_H-elongata_contig117845.1386.1|Name=mRNA_H-elongata_contig117845.1386.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=224bp
QQGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSK
KVSWPLYKKYGHAYDAFKLTLQDEEDVFVGLDIDDETKRAMITNIKRRLA
PQPSKVRADVEVTCYTYEGIDAVKAALMAGKAVGDERTPIQIKLIAPPRY
VMDTMTSDKDLGKSVLEKAIDVVTHNIVAAGGKLEVKMAPKAVSQREESE
LQAMLERLALENEEIDGDAPEDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024055TIF2_asu_C
IPR011488TIF_2_asu
IPR024054TIF2_asu_middle_sf