prot_H-elongata_contig117684.1379.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig117684.1379.1
Unique Nameprot_H-elongata_contig117684.1379.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length44
Homology
BLAST of mRNA_H-elongata_contig117684.1379.1 vs. uniprot
Match: D7FVR2_ECTSI (ARL6, ARF-like Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR2_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 5.350e-13
Identity = 35/42 (83.33%), Postives = 40/42 (95.24%), Query Frame = 0
Query:    1 MGLFKRIATAITGFSRGSVRILVVGLDNSGKSTLIEHIKPNK 42
            MGLFK+IA+A+ G SRG++RILVVGLDNSGKSTLIEHIKPNK
Sbjct:    1 MGLFKKIASAM-GRSRGNMRILVVGLDNSGKSTLIEHIKPNK 41          
BLAST of mRNA_H-elongata_contig117684.1379.1 vs. uniprot
Match: A0A3R7EJ99_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7EJ99_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 8.350e-10
Identity = 27/44 (61.36%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 MGLFKRIATAITGFSRGSVRILVVGLDNSGKSTLIEHIKPNKVR 44
            MGLFK++A ++ G  + SVRILVVGLDNSGK+TL+ H+KP K++
Sbjct:   23 MGLFKKLANSL-GMKKQSVRILVVGLDNSGKTTLVNHLKPKKLQ 65          
BLAST of mRNA_H-elongata_contig117684.1379.1 vs. uniprot
Match: A0A7S2V202_9STRA (ADP-ribosylation factor-like protein 6 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V202_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.000e-9
Identity = 29/42 (69.05%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 MGLFKRIATAITGFSRGSVRILVVGLDNSGKSTLIEHIKPNK 42
            MG FKRIA ++ GF +  VRIL+VGLDNSGK+TLI HIKP K
Sbjct:    1 MGFFKRIANSL-GFQKHEVRILIVGLDNSGKTTLINHIKPKK 41          
BLAST of mRNA_H-elongata_contig117684.1379.1 vs. uniprot
Match: A0A485KFA7_9STRA (Aste57867_3371 protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A485KFA7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.770e-9
Identity = 27/44 (61.36%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 MGLFKRIATAITGFSRGSVRILVVGLDNSGKSTLIEHIKPNKVR 44
            MGLFK++A ++ G  + SVRILVVGLDNSGK+TL+ H+KP K++
Sbjct:    1 MGLFKKLANSL-GMKKQSVRILVVGLDNSGKTTLVNHLKPKKLQ 43          
BLAST of mRNA_H-elongata_contig117684.1379.1 vs. uniprot
Match: A0A2D4BWT4_PYTIN (ADP-ribosylation factor family n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BWT4_PYTIN)

HSP 1 Score: 57.8 bits (138), Expect = 3.910e-9
Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    1 MGLFKRIATAITGFSRGSVRILVVGLDNSGKSTLIEHIKPNK 42
            MGLFK++AT++ G  +  VRILVVGLDNSGK+TL+ H+KP K
Sbjct:    1 MGLFKQLATSL-GMKKTEVRILVVGLDNSGKTTLVNHLKPKK 41          
BLAST of mRNA_H-elongata_contig117684.1379.1 vs. uniprot
Match: A0A6S9ITP1_HETAK (ADP-ribosylation factor-like protein 6 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ITP1_HETAK)

HSP 1 Score: 57.8 bits (138), Expect = 6.280e-9
Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 MGLFKRIATAITGFSRGSVRILVVGLDNSGKSTLIEHIKPNK 42
            MGLFK+IA A+ G S   VRILVVGLDNSGK+TLI HIKP K
Sbjct:   14 MGLFKKIAQAM-GMSWVEVRILVVGLDNSGKTTLINHIKPKK 54          
BLAST of mRNA_H-elongata_contig117684.1379.1 vs. uniprot
Match: A0A067CAA2_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CAA2_SAPPC)

HSP 1 Score: 57.4 bits (137), Expect = 7.720e-9
Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    1 MGLFKRIATAITGFSRGSVRILVVGLDNSGKSTLIEHIKPNK 42
            MGLFK++A+A+ G  +  VRILVVGLDNSGK+TL+ H+KP K
Sbjct:    1 MGLFKQLASAL-GMKKAVVRILVVGLDNSGKTTLVNHLKPRK 41          
BLAST of mRNA_H-elongata_contig117684.1379.1 vs. uniprot
Match: A0A225UHK2_9STRA (ADP-ribosylation factor protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UHK2_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.010e-8
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 MGLFKRIATAITGFSRGSVRILVVGLDNSGKSTLIEHIKPNK 42
            MGLFK +A+A+ G  +  VRILVVGLDNSGK+TL+ H+KP K
Sbjct:    1 MGLFKLLASAL-GIKKTQVRILVVGLDNSGKTTLVNHLKPKK 41          
BLAST of mRNA_H-elongata_contig117684.1379.1 vs. uniprot
Match: A0A0W8DJ51_PHYNI (Coiled-coil domain-containing protein 22 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DJ51_PHYNI)

HSP 1 Score: 55.5 bits (132), Expect = 1.800e-8
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 MGLFKRIATAITGFSRGSVRILVVGLDNSGKSTLIEHIKPNK 42
            MGLFK +A A+ G  +  VRILVVGLDNSGK+TL+ H+KP K
Sbjct:    1 MGLFKVLANAL-GLKKTQVRILVVGLDNSGKTTLVNHLKPKK 41          
BLAST of mRNA_H-elongata_contig117684.1379.1 vs. uniprot
Match: H3G5F9_PHYRM (ADP-ribosylation factor-like protein 6 n=21 Tax=Phytophthora TaxID=4783 RepID=H3G5F9_PHYRM)

HSP 1 Score: 56.2 bits (134), Expect = 1.930e-8
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 MGLFKRIATAITGFSRGSVRILVVGLDNSGKSTLIEHIKPNK 42
            MGLFK +A+A+ G  +  VRILVVGLDNSGK+TL+ H+KP K
Sbjct:    1 MGLFKLLASAL-GIKKTQVRILVVGLDNSGKTTLVNHLKPKK 41          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117684.1379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVR2_ECTSI5.350e-1383.33ARL6, ARF-like Ras superfamily GTPase n=1 Tax=Ecto... [more]
A0A3R7EJ99_9STRA8.350e-1061.36Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A7S2V202_9STRA1.000e-969.05ADP-ribosylation factor-like protein 6 n=1 Tax=Fib... [more]
A0A485KFA7_9STRA2.770e-961.36Aste57867_3371 protein n=7 Tax=Aphanomyces TaxID=1... [more]
A0A2D4BWT4_PYTIN3.910e-964.29ADP-ribosylation factor family n=2 Tax=Pythium Tax... [more]
A0A6S9ITP1_HETAK6.280e-973.81ADP-ribosylation factor-like protein 6 n=1 Tax=Het... [more]
A0A067CAA2_SAPPC7.720e-964.29Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A225UHK2_9STRA1.010e-864.29ADP-ribosylation factor protein (Fragment) n=1 Tax... [more]
A0A0W8DJ51_PHYNI1.800e-864.29Coiled-coil domain-containing protein 22 n=1 Tax=P... [more]
H3G5F9_PHYRM1.930e-864.29ADP-ribosylation factor-like protein 6 n=21 Tax=Ph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..44
e-value: 6.7E-6
score: 27.3
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 16..43
e-value: 3.0E-6
score: 26.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig117684contigH-elongata_contig117684:125..256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig117684.1379.1mRNA_H-elongata_contig117684.1379.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig117684 125..256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig117684.1379.1 ID=prot_H-elongata_contig117684.1379.1|Name=mRNA_H-elongata_contig117684.1379.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp
MGLFKRIATAITGFSRGSVRILVVGLDNSGKSTLIEHIKPNKVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR027417P-loop_NTPase