prot_H-elongata_contig117508.1369.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig117508.1369.1
Unique Nameprot_H-elongata_contig117508.1369.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
BLAST of mRNA_H-elongata_contig117508.1369.1 vs. uniprot
Match: A0A6H5L3A9_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A9_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 5.070e-16
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0
Query:   29 SFCSES-DGANA-QVYKTRVSRVRLATLAADMRCFLSANPGAVFADFVRWYSPPNW 82
            SF +ES DG  A Q   TR SR+RL+TL+ADM+CFLSANPGAVFADF+RWYSPPNW
Sbjct: 1150 SFAAESSDGFRARQQSNTRASRLRLSTLSADMQCFLSANPGAVFADFLRWYSPPNW 1205          
BLAST of mRNA_H-elongata_contig117508.1369.1 vs. uniprot
Match: UPI001F5E5492 (rab3 GTPase-activating protein catalytic subunit n=1 Tax=Schistocerca piceifrons TaxID=274613 RepID=UPI001F5E5492)

HSP 1 Score: 57.8 bits (138), Expect = 1.610e-7
Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 0
Query:   47 SRVRLATLAADMRCFLSANPGAVFADFVRWYSPPNWR 83
            +R+  A L +DM CF +ANPGAV  DF+RWYSPP+W+
Sbjct:  633 ARIMSAALLSDMECFKAANPGAVLEDFIRWYSPPDWK 669          
BLAST of mRNA_H-elongata_contig117508.1369.1 vs. uniprot
Match: UPI001F4F9304 (rab3 GTPase-activating protein catalytic subunit n=1 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F4F9304)

HSP 1 Score: 57.8 bits (138), Expect = 1.630e-7
Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 0
Query:   47 SRVRLATLAADMRCFLSANPGAVFADFVRWYSPPNWR 83
            +R+  A L +DM CF +ANPGAV  DF+RWYSPP+W+
Sbjct:  633 ARIMSAALLSDMECFKAANPGAVLEDFIRWYSPPDWK 669          
BLAST of mRNA_H-elongata_contig117508.1369.1 vs. uniprot
Match: A0A2J6KB90_LACSA (Rab3 GTPase-activating protein catalytic subunit n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6KB90_LACSA)

HSP 1 Score: 53.9 bits (128), Expect = 3.590e-6
Identity = 19/38 (50.00%), Postives = 30/38 (78.95%), Query Frame = 0
Query:   54 LAADMRCFLSANPGAVFADFVRWYSPPNWRPSGELRKR 91
            L +DM+ F +ANPG +  DFVRW+SPP+W P+G++ ++
Sbjct:  405 LLSDMQAFKAANPGCILEDFVRWHSPPDWEPAGDVERK 442          
BLAST of mRNA_H-elongata_contig117508.1369.1 vs. uniprot
Match: A0A8J9VS04_9NEOP ((lesser marbled fritillary) hypothetical protein n=1 Tax=Brenthis ino TaxID=405034 RepID=A0A8J9VS04_9NEOP)

HSP 1 Score: 53.5 bits (127), Expect = 4.560e-6
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   36 GANAQVYKTRVSRVRLATLAADMRCFLSANPGAVFADFVRWYSPPNWRP 84
            G NA+  + R +R+  A+L +DM  F +ANPGA   DFVRWYSP +W+P
Sbjct:  135 GDNAKASELR-ARMMSASLLSDMEAFKAANPGAELCDFVRWYSPRDWKP 182          
BLAST of mRNA_H-elongata_contig117508.1369.1 vs. uniprot
Match: A0A2V0NSJ2_9CHLO (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NSJ2_9CHLO)

HSP 1 Score: 53.1 bits (126), Expect = 7.040e-6
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:   33 ESDGANAQVYKTRVSRVRLATLAADMRCFLSANPGAVFADFVRWYSPPNW 82
            E+    A V K R+ + RL  L +DM  F +ANPG VF DFVRWYSP +W
Sbjct: 1465 EASAGAALVDKVRLHQSRL--LVSDMSAFKAANPGCVFEDFVRWYSPSDW 1512          
BLAST of mRNA_H-elongata_contig117508.1369.1 vs. uniprot
Match: A0A392RAJ0_9FABA (Rab3 GTPase-activating protein catalytic subunit (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392RAJ0_9FABA)

HSP 1 Score: 49.7 bits (117), Expect = 7.650e-6
Identity = 18/29 (62.07%), Postives = 24/29 (82.76%), Query Frame = 0
Query:   54 LAADMRCFLSANPGAVFADFVRWYSPPNW 82
            L +DM+ F +ANPG ++ DFVRWYSPP+W
Sbjct:   11 LLSDMQAFKAANPGCIWEDFVRWYSPPDW 39          
BLAST of mRNA_H-elongata_contig117508.1369.1 vs. uniprot
Match: A0A212FF94_DANPL (Rab3 GTPase-activating protein catalytic subunit n=2 Tax=Danaus TaxID=13036 RepID=A0A212FF94_DANPL)

HSP 1 Score: 52.4 bits (124), Expect = 1.150e-5
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   36 GANAQVYKTRVSRVRLATLAADMRCFLSANPGAVFADFVRWYSPPNWRP 84
            G NA+  + R +++  A+L +DM  F +ANPGA   DFVRWYSP +W+P
Sbjct:  116 GDNAKASELR-AKMMSASLLSDMEAFKAANPGAELCDFVRWYSPRDWKP 163          
BLAST of mRNA_H-elongata_contig117508.1369.1 vs. uniprot
Match: A0A7I1A9J8_DANPL (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Danaus plexippus plexippus TaxID=278856 RepID=A0A7I1A9J8_DANPL)

HSP 1 Score: 52.4 bits (124), Expect = 1.270e-5
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   36 GANAQVYKTRVSRVRLATLAADMRCFLSANPGAVFADFVRWYSPPNWRP 84
            G NA+  + R +++  A+L +DM  F +ANPGA   DFVRWYSP +W+P
Sbjct:  585 GDNAKASELR-AKMMSASLLSDMEAFKAANPGAELCDFVRWYSPRDWKP 632          
BLAST of mRNA_H-elongata_contig117508.1369.1 vs. uniprot
Match: UPI001B3BA774 (rab3 GTPase-activating protein catalytic subunit isoform X4 n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=UPI001B3BA774)

HSP 1 Score: 52.0 bits (123), Expect = 1.740e-5
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 0
Query:   53 TLAADMRCFLSANPGAVFADFVRWYSPPNW 82
            TL++DM  F +ANPGAVF DF+RWYSP +W
Sbjct:  623 TLSSDMSAFKAANPGAVFEDFIRWYSPTDW 652          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117508.1369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3A9_9PHAE5.070e-1673.21Rab3 GTPase-activating protein catalytic subunit n... [more]
UPI001F5E54921.610e-759.46rab3 GTPase-activating protein catalytic subunit n... [more]
UPI001F4F93041.630e-759.46rab3 GTPase-activating protein catalytic subunit n... [more]
A0A2J6KB90_LACSA3.590e-650.00Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A8J9VS04_9NEOP4.560e-651.02(lesser marbled fritillary) hypothetical protein n... [more]
A0A2V0NSJ2_9CHLO7.040e-652.00Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A392RAJ0_9FABA7.650e-662.07Rab3 GTPase-activating protein catalytic subunit (... [more]
A0A212FF94_DANPL1.150e-548.98Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A7I1A9J8_DANPL1.270e-548.98Rab3 GTPase-activating protein catalytic subunit n... [more]
UPI001B3BA7741.740e-566.67rab3 GTPase-activating protein catalytic subunit i... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026147Rab3 GTPase-activating protein catalytic subunitPFAMPF13890Rab3-GTPase_catcoord: 44..94
e-value: 1.1E-14
score: 54.4
IPR026147Rab3 GTPase-activating protein catalytic subunitPANTHERPTHR21422FAMILY NOT NAMEDcoord: 48..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig117508contigH-elongata_contig117508:1550..1858 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig117508.1369.1mRNA_H-elongata_contig117508.1369.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig117508 1550..1858 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig117508.1369.1 ID=prot_H-elongata_contig117508.1369.1|Name=mRNA_H-elongata_contig117508.1369.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
CHLDRSLSECVPSPPHSTPTSHLLRSPPSFCSESDGANAQVYKTRVSRVR
LATLAADMRCFLSANPGAVFADFVRWYSPPNWRPSGELRKRRRQGRAHKP
RTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026147Rab3-GAP_cat_su