prot_H-elongata_contig117294.1354.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig117294.1354.1
Unique Nameprot_H-elongata_contig117294.1354.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
BLAST of mRNA_H-elongata_contig117294.1354.1 vs. uniprot
Match: A0A6H5KUV0_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUV0_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.260e-44
Identity = 74/87 (85.06%), Postives = 77/87 (88.51%), Query Frame = 0
Query:    3 CADHEQGFQKDFAKYGEKNAQIVGVSVDSVEKHLNFEKSYGLQFPLLSDIGAKVADAYGSKLEIPFMGKFANRLTFIIGSDGKIEKV 89
            C    QGFQ+DF KYG  NAQIVGVSVDS+EKHLNFEKSY LQFPLLSDIGA VAD YGSKL+IPFMGKFANRLTFIIGSDGKIEKV
Sbjct:  110 CTIEAQGFQRDFEKYGANNAQIVGVSVDSIEKHLNFEKSYNLQFPLLSDIGANVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKV 196          
BLAST of mRNA_H-elongata_contig117294.1354.1 vs. uniprot
Match: A0A835ZEZ0_9STRA (Peroxiredoxin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEZ0_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.140e-30
Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 0
Query:    3 CADHEQGFQKDFAKYGEKNAQIVGVSVDSVEKHLNFEKSYGLQFPLLSDIGAKVADAYGSKLEIPFMGKFANRLTFIIGSDGKIEKV 89
            C    +GFQKD  +Y   NAQ+VG+SVDS EKHL+F+K YGL F LLSD  A VAD YG+KL+IP +GKFANR+T+II  DGKIEKV
Sbjct:  111 CTIEARGFQKDIDRYKALNAQVVGMSVDSAEKHLDFKKKYGLDFILLSDKNAVVADKYGAKLDIPIIGKFANRITYIISPDGKIEKV 197          
BLAST of mRNA_H-elongata_contig117294.1354.1 vs. uniprot
Match: A0A7S3UYL6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYL6_HETAK)

HSP 1 Score: 110 bits (276), Expect = 3.300e-28
Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = 0
Query:    3 CADHEQGFQKDFAKYGEKNAQIVGVSVDSVEKHLNFEKSYGLQFPLLSDIGAKVADAYGSKLEIPFMGKFANRLTFIIGSDGKIEKV 89
            C      F++DF ++ + NAQIVGVSVDSV+KHL+F+K YGL+FPLLSD GA V+++YGS L IP +GKF+NR T+II  +GK+ KV
Sbjct:  134 CTIEANAFERDFDEFAKLNAQIVGVSVDSVDKHLDFKKKYGLRFPLLSDQGAVVSESYGSSLSIPLLGKFSNRQTYIISPEGKVVKV 220          
BLAST of mRNA_H-elongata_contig117294.1354.1 vs. uniprot
Match: A0A4D9CLH8_9STRA (Thioredoxin domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLH8_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 5.650e-23
Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 0
Query:    1 TQCADHEQGFQKDFAKYGEKNAQIVGVSVDSVEKHLNFEKSYGLQFPLLSDIGAKVADAYGSKLEIPFMGKFANRLTFIIGSDGKIEKV 89
            + C    + FQ+D   Y + NAQIVGVSVD  +K  +F+   GL F LLSD GAK+++AYGS L+IPF+G+F+NR T+II  DGK+ KV
Sbjct:  170 SSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKISEAYGSALDIPFLGRFSNRQTYIISPDGKLVKV 258          
BLAST of mRNA_H-elongata_contig117294.1354.1 vs. uniprot
Match: L1J8E5_GUITC (Peroxiredoxin n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J8E5_GUITC)

HSP 1 Score: 96.7 bits (239), Expect = 1.020e-22
Identity = 49/87 (56.32%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    3 CADHEQGFQKDFAKYGEKNAQIVGVSVDSVEKHLNFEKSYGLQFPLLSDIGAKVADAYGSKLEIPFMGKFANRLTFIIGSDGKIEKV 89
            C      F+K  A      A+IVGVSVDSVEKHL+F K YGL FPLLSD G KV+  YGS L+IPFMG F+NR T+II   G +  V
Sbjct:  131 CTIEANNFEKASADIRALGAEIVGVSVDSVEKHLDFAKKYGLSFPLLSDQGGKVSQLYGSALQIPFMGSFSNRQTYIIDPSGNLRWV 217          
BLAST of mRNA_H-elongata_contig117294.1354.1 vs. uniprot
Match: A0A7S0Z1C5_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z1C5_9CRYP)

HSP 1 Score: 92.0 bits (227), Expect = 5.720e-21
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    3 CADHEQGFQKDFAKYGEKNAQIVGVSVDSVEKHLNFEKSYGLQFPLLSDIGAKVADAYGSKLEIPFMGKFANRLTFIIGSDGKIEKV 89
            C    Q F+K+  K  +  A+IVGVSVDS EKHL+F K YGL FPLLSD G KV+D+YGS L++  +G F+NR T++I   G ++ V
Sbjct:  126 CTIEAQNFEKNAPKIRDLGAEIVGVSVDSAEKHLDFAKKYGLSFPLLSDKGGKVSDSYGSALKLGPIGTFSNRQTYLIDPSGTLKYV 212          
BLAST of mRNA_H-elongata_contig117294.1354.1 vs. uniprot
Match: A0A7S0U0Z0_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U0Z0_HEMAN)

HSP 1 Score: 88.2 bits (217), Expect = 2.190e-19
Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    3 CADHEQGFQKDFAKYGEKNAQIVGVSVDSVEKHLNFEKSYGLQFPLLSDIGAKVADAYGSKLEIPFMGKFANRLTFIIGSDGKIEKV 89
            C    Q F+K+  +  +  A+IVGVSVDS EKHL+F K YGL FPLLSD G KV+++YG+ L++  +G F+NR T++I   G ++ V
Sbjct:  139 CTIEAQNFEKNSKQIRDLGAEIVGVSVDSAEKHLDFAKKYGLSFPLLSDKGGKVSESYGTALKLGPIGTFSNRQTYLIDPSGNLKYV 225          
BLAST of mRNA_H-elongata_contig117294.1354.1 vs. uniprot
Match: B7G0F8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0F8_PHATC)

HSP 1 Score: 84.7 bits (208), Expect = 2.370e-18
Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    3 CADHEQGFQKDFAKYGEKNAQIVGVSVDSVEKHLNFEKSYGLQFPLLSDIGAKVADAYGSKLEIPFMGKFANRLTFIIGSDGKIEKV 89
            C    +GFQ+D  +Y   NAQIVGVSVD VEK+  F  + GL F +LSD G +V++ YGS L +P  G F+NR T+II  +G +  V
Sbjct:  100 CTLEARGFQRDIERYRALNAQIVGVSVDPVEKNAQFCSAEGLDFYMLSDTGGRVSNLYGSALSVPGFGMFSNRQTYIIDPEGNLRWV 186          
BLAST of mRNA_H-elongata_contig117294.1354.1 vs. uniprot
Match: A0A7S1FR32_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FR32_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 8.840e-17
Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 0
Query:    3 CADHEQGFQKDFAKYGEKNAQIVGVSVDSVEKHLNFEKSYGLQFPLLSDIGAKVADAYGSKLEIPFMGKFANRLTFIIGSDGKIEKV 89
            C    +GFQ+D   Y   NAQ+VGVSVD VEK+  F  +  L F +LSD G KV+  Y S L +P  G F+NR T+IIG DG +  V
Sbjct:  134 CTLEARGFQRDQDAYRSLNAQVVGVSVDPVEKNAQFCAAENLDFFMLSDFGGKVSKRYNSALTVPGFGTFSNRKTYIIGPDGTVRWV 220          
BLAST of mRNA_H-elongata_contig117294.1354.1 vs. uniprot
Match: A0A7S1FQZ8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQZ8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.740e-16
Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 0
Query:    3 CADHEQGFQKDFAKYGEKNAQIVGVSVDSVEKHLNFEKSYGLQFPLLSDIGAKVADAYGSKLEIPFMGKFANRLTFIIGSDGKIEKV 89
            C    +GFQ+D   Y   NAQ+VGVSVD VEK+  F  +  L F +LSD G KV+  Y S L +P  G F+NR T+IIG DG +  V
Sbjct:  228 CTLEARGFQRDQDAYRSLNAQVVGVSVDPVEKNAQFCAAENLDFFMLSDFGGKVSKRYNSALTVPGFGTFSNRKTYIIGPDGTVRWV 314          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117294.1354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUV0_9PHAE1.260e-4485.06Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A835ZEZ0_9STRA2.140e-3064.37Peroxiredoxin family protein n=1 Tax=Tribonema min... [more]
A0A7S3UYL6_HETAK3.300e-2858.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CLH8_9STRA5.650e-2352.81Thioredoxin domain-containing protein n=2 Tax=Mono... [more]
L1J8E5_GUITC1.020e-2256.32Peroxiredoxin n=2 Tax=Guillardia theta TaxID=55529... [more]
A0A7S0Z1C5_9CRYP5.720e-2151.72Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S0U0Z0_HEMAN2.190e-1948.28Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
B7G0F8_PHATC2.370e-1848.28Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1FR32_9STRA8.840e-1748.28Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1FQZ8_9STRA2.740e-1648.28Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 1..89
e-value: 2.5E-22
score: 80.8
NoneNo IPR availablePANTHERPTHR42852FAMILY NOT NAMEDcoord: 2..88
NoneNo IPR availablePANTHERPTHR42852:SF10coord: 2..88
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 2..88
e-value: 2.1E-18
score: 66.5
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 3..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig117294contigH-elongata_contig117294:1346..2006 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig117294.1354.1mRNA_H-elongata_contig117294.1354.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig117294 1346..2006 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig117294.1354.1 ID=prot_H-elongata_contig117294.1354.1|Name=mRNA_H-elongata_contig117294.1354.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
TQCADHEQGFQKDFAKYGEKNAQIVGVSVDSVEKHLNFEKSYGLQFPLLS
DIGAKVADAYGSKLEIPFMGKFANRLTFIIGSDGKIEKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000866AhpC/TSA
IPR036249Thioredoxin-like_sf