prot_H-elongata_contig11726.1349.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11726.1349.1
Unique Nameprot_H-elongata_contig11726.1349.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length199
Homology
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A182H216_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H216_AEDAL)

HSP 1 Score: 108 bits (270), Expect = 6.060e-25
Identity = 68/203 (33.50%), Postives = 111/203 (54.68%), Query Frame = 0
Query:   11 KFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNP----EKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCG-LCMQVNTD---------SNSGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 199
            +F++K+    +YC+   I+RN    EL IDQ  Y+E ++++ ++      P ++   +  + D+   P    E EEM+K PY++AVG L + A   +PDI+  V AV++F  NPGR H ++V +I++YL  T N  + + ++G G +    + D         S +G V M   GAISW  + Q   A  + EAEY+ALS  +
Sbjct:   31 RFRMKDLGQAKYCLGLQISRNKERGELSIDQRKYIEDVLDRFNLTDCH--PVSTPFESSERLDKSMTPKSQDEIEEMKKVPYKEAVGCLQYIAQATRPDISFAVNAVSQFSSNPGRKHWEAVKRILRYLKGTINNRLLFNKRGNGEIIGYTDADWGGDVDSRRSTTGYVFMFQGGAISWNVKRQPTVALSSCEAEYMALSRTI 231          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A1W7R6K6_AEDAL (Putative retrovirus-related pol polyprotein from transposon tnt (Fragment) n=4 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6K6_AEDAL)

HSP 1 Score: 109 bits (272), Expect = 4.060e-24
Identity = 68/203 (33.50%), Postives = 110/203 (54.19%), Query Frame = 0
Query:   11 KFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNP----EKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCG-LCMQVNTD---------SNSGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 199
            +F++K+    +YC+   I+RN    EL IDQ  Y+E ++++ ++      P ++   +  + D+   P    E EEM+K PY++AVG L + A   +PDI+  V AV++F  NPGR H ++V +I +YL  T N  + + ++G G +    + D         S +G V M   GAISW  + Q   A  + EAEY+ALS  +
Sbjct: 1069 RFRMKDLGQAKYCLGLQISRNKERGELSIDQRKYIEDVLDRFNL--ADCHPVSTPFESSERLDKSMTPKSQNEMEEMKKVPYKEAVGCLQYIAQATRPDISFAVNAVSQFSSNPGRKHWEAVKRIFRYLKGTINNRLLFNKRGNGEIIGYTDADWGGDVDSRRSTTGYVFMFQGGAISWNVKRQPTVALSSCEAEYMALSRTI 1269          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY)

HSP 1 Score: 106 bits (265), Expect = 1.590e-23
Identity = 67/206 (32.52%), Postives = 114/206 (55.34%), Query Frame = 0
Query:    4 FAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVK--KGSKIPTTSGVPTFSKADEPWN-PEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSNS--------GAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEA 198
            +  ++ +K+ L +  +V + +   + R+  AR L + QH Y++S++ + +    K S IP    +   +K+  P +  +   MRK PYR+A+G+LM+ A   +PDI+  +  +A+F +NPG  H ++V ++ +YLL TKN  + YG    GL   V+ D  S        G V ++  GA+SW S+ QE+     +EAEYVA + A
Sbjct:  161 YKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNL-QLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGLEGYVDADGASQEHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHA 365          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 2.530e-23
Identity = 70/204 (34.31%), Postives = 109/204 (53.43%), Query Frame = 0
Query:    6 AKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 199
            A L +KF  K   + ++     I R+  A  L+I Q  Y++SMVE+ DVK  S+IP T G     K ++      EE  ++P R+A+G++MW +T  +PD++  VRAVAR    P + H  ++ KI+ YL  T++  ITY R G GL + V  D++          SG    +    +S  S+ Q + +  ++EAEY+A  E V
Sbjct:  238 ASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGV 434          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY)

HSP 1 Score: 106 bits (265), Expect = 3.540e-23
Identity = 67/206 (32.52%), Postives = 114/206 (55.34%), Query Frame = 0
Query:    4 FAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVK--KGSKIPTTSGVPTFSKADEPWN-PEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSNS--------GAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEA 198
            +  ++ +K+ L +  +V + +   + R+  AR L + QH Y++S++ + +    K S IP    +   +K+  P +  +   MRK PYR+A+G+LM+ A   +PDI+  +  +A+F +NPG  H ++V ++ +YLL TKN  + YG    GL   V+ D  S        G V ++  GA+SW S+ QE+     +EAEYVA + A
Sbjct: 1178 YKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNL-QLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGLEGYVDADGASQEHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHA 1382          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 4.730e-23
Identity = 70/204 (34.31%), Postives = 109/204 (53.43%), Query Frame = 0
Query:    6 AKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 199
            A L +KF  K   + ++     I R+  A  L+I Q  Y++SMVE+ DVK  S+IP T G     K ++      EE  ++P R+A+G++MW +T  +PD++  VRAVAR    P + H  ++ KI+ YL  T++  ITY R G GL + V  D++          SG    +    +S  S+ Q + +  ++EAEY+A  E V
Sbjct:  951 ASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGV 1147          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 4.860e-23
Identity = 70/204 (34.31%), Postives = 109/204 (53.43%), Query Frame = 0
Query:    6 AKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 199
            A L +KF  K   + ++     I R+  A  L+I Q  Y++SMVE+ DVK  S+IP T G     K ++      EE  ++P R+A+G++MW +T  +PD++  VRAVAR    P + H  ++ KI+ YL  T++  ITY R G GL + V  D++          SG    +    +S  S+ Q + +  ++EAEY+A  E V
Sbjct: 1330 ASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGV 1526          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 4.880e-23
Identity = 70/204 (34.31%), Postives = 109/204 (53.43%), Query Frame = 0
Query:    6 AKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 199
            A L +KF  K   + ++     I R+  A  L+I Q  Y++SMVE+ DVK  S+IP T G     K ++      EE  ++P R+A+G++MW +T  +PD++  VRAVAR    P + H  ++ KI+ YL  T++  ITY R G GL + V  D++          SG    +    +S  S+ Q + +  ++EAEY+A  E V
Sbjct: 1350 ASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGV 1546          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 4.900e-23
Identity = 70/204 (34.31%), Postives = 109/204 (53.43%), Query Frame = 0
Query:    6 AKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGLCMQVNTDSN----------SGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV 199
            A L +KF  K   + ++     I R+  A  L+I Q  Y++SMVE+ DVK  S+IP T G     K ++      EE  ++P R+A+G++MW +T  +PD++  VRAVAR    P + H  ++ KI+ YL  T++  ITY R G GL + V  D++          SG    +    +S  S+ Q + +  ++EAEY+A  E V
Sbjct: 1493 ASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGV 1689          
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Match: A0A8H6Y342_9AGAR (Transcription factor n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6Y342_9AGAR)

HSP 1 Score: 102 bits (255), Expect = 5.490e-23
Identity = 62/186 (33.33%), Postives = 98/186 (52.69%), Query Frame = 0
Query:   20 VRYCMSYHITRNHNARELKIDQHLYVESMVEKLDVK--KGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTATMRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGCGL--------CMQVNTDSNSGAVLMLSKGAISWYSRMQEVTASGASEAEYVAL 195
            V + +   I RN  A  + + Q  Y+ES++E+ +    K   +P    V   ++       +   M++ PYR+AVG+LMW A   +PDIA  V  ++++  NPG  H ++V ++ +YL  TK+W +TYG    GL          Q N  + SG   ++  GAISW S+ QE+     +EAEYVA+
Sbjct:    7 VSWLLGIQIARNREAHMISLSQQSYLESILERFNFADAKPLAMPMDPNVQLTTEHCPKSIRDIAAMKRIPYREAVGSLMWAAVGTRPDIAFVVGVLSKYLNNPGPTHWEAVKRVFRYLQGTKDWRLTYGAGKAGLEGYSDADGMSQENRRAISGYAFIIDGGAISWSSKKQELVTLSTTEAEYVAM 192          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11726.1349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A182H216_AEDAL6.060e-2533.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1W7R6K6_AEDAL4.060e-2433.50Putative retrovirus-related pol polyprotein from t... [more]
A0A4S4K468_9APHY1.590e-2332.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KTL3_9PHAE2.530e-2334.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2R6PCF8_9APHY3.540e-2332.52Uncharacterized protein n=1 Tax=Hermanssonia centr... [more]
A0A6H5KSG8_9PHAE4.730e-2334.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE4.860e-2334.31Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE4.880e-2334.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE4.900e-2334.31Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A8H6Y342_9AGAR5.490e-2333.33Transcription factor n=1 Tax=Mycena sanguinolenta ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 196..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11726contigH-elongata_contig11726:7760..8356 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11726.1349.1mRNA_H-elongata_contig11726.1349.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11726 7760..8761 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11726.1349.1 ID=prot_H-elongata_contig11726.1349.1|Name=mRNA_H-elongata_contig11726.1349.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
MDRFAAKLEQKFKLKERDDVRYCMSYHITRNHNARELKIDQHLYVESMVE
KLDVKKGSKIPTTSGVPTFSKADEPWNPEKEEMRKFPYRQAVGALMWTAT
MRQPDIASKVRAVARFCKNPGRAHKKSVMKIMQYLLHTKNWWITYGRQGC
GLCMQVNTDSNSGAVLMLSKGAISWYSRMQEVTASGASEAEYVALSEAV
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