prot_H-elongata_contig11723.1346.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11723.1346.1
Unique Nameprot_H-elongata_contig11723.1346.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length141
Homology
BLAST of mRNA_H-elongata_contig11723.1346.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 4.720e-26
Identity = 57/133 (42.86%), Postives = 75/133 (56.39%), Query Frame = 0
Query:    6 FRDNVFVCEAGSFIIEVESDDPFGLICSGCGDCEA---CSLDEPRTAPGCSSTVEHAISQGGYNATLEWLWIQPGYWRAANDSLEILACYKEDACKGGITGSATFCEMGYMGPYCSVCEKNYFSGPGSTCTEC 135
            F  NV  CE G ++  V+ D  +  +C GC    +    S++     P C   ++H  S+GG + T+E L +  GYWRA NDS  +LACY EDAC GG+T    FC+ GY GPYCSVC + Y      TCTEC
Sbjct: 1252 FSGNVLSCENGMYLDSVDGD-RYQTVCDGCPVNNSDWIVSVENGDRVPICVVQLDHTRSEGG-DTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTEC 1382          
BLAST of mRNA_H-elongata_contig11723.1346.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 9.290e-15
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 0
Query:    1 MADCYFRDNVFVCEAGSFIIEVESDDP-------FGLICSGCG-DCEACSLDEPRTA--------PGCSSTVEHAISQGGYNATLEWLWIQPGYWRAANDSLEILACYKEDACKGGITGSATFCEMGYMGPYCSVCEKNYFSGPGSTCTECSNSN 139
            + D  F  N + C +G +  E E  +        FG++CS C   CE    D P +         P C + +    + G    TL  L +  GY+R + +S  +L CY+E+AC GG T  + +C+ GY G YC+VC++ Y SG   +C+ C   N
Sbjct:  530 ITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAASCE----DNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGG-TDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGEN 679          
BLAST of mRNA_H-elongata_contig11723.1346.1 vs. uniprot
Match: A0A836CBV5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBV5_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 9.120e-10
Identity = 29/73 (39.73%), Postives = 40/73 (54.79%), Query Frame = 0
Query:   65 YNATLEWLWIQPGYWRAANDSLEILACYKEDACKGGITGSAT--FCEMGYMGPYCSVCEKNYFSGPGSTCTEC 135
            Y  T+E + +  GYWR      +I AC++ DAC GG+  +    +C  GY GPYC+VC   Y + PG  C  C
Sbjct: 1633 YGETVETMTLGLGYWRETLTQTDIRACWRSDACDGGMATAEPDQYCAEGYQGPYCAVCADGYAAAPGYQCLNC 1705          
BLAST of mRNA_H-elongata_contig11723.1346.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 2.260e-9
Identity = 35/89 (39.33%), Postives = 46/89 (51.69%), Query Frame = 0
Query:   52 CSSTVEHAISQ---GGYNATLEWLWIQPGYWRAANDSLEILACYKEDACKGGITGSAT--FCEMGYMGPYCSVCEKNYFSGPGSTCTEC 135
            C+ +++ AI         AT   L I+ GYWRA   SL I  C+ E ACKGG T +    +C  GY+GP C+VCE  +  G    C  C
Sbjct:  815 CTESIDGAIEGVDCASAGATTTELPIKAGYWRANVTSLTIRECFNEGACKGGTTVAEVQEYCNEGYVGPQCAVCETGFGKGMADECHSC 903          
BLAST of mRNA_H-elongata_contig11723.1346.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 5.690e-9
Identity = 34/89 (38.20%), Postives = 46/89 (51.69%), Query Frame = 0
Query:   52 CSSTVEHAISQ---GGYNATLEWLWIQPGYWRAANDSLEILACYKEDACKGGITGSAT--FCEMGYMGPYCSVCEKNYFSGPGSTCTEC 135
            C+ +++ AI         AT   L I+ GYWRA   SL I  C+ E ACKGG T +    +C  GY+GP C+VC+  +  G    C  C
Sbjct:  851 CTESIDGAIEGVDCASAGATTTELPIKAGYWRANVTSLTIRECFNEGACKGGTTVAEVQDYCNEGYVGPQCAVCDTGFGKGVADECHSC 939          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11723.1346.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JY65_9PHAE4.720e-2642.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWI3_9PHAE9.290e-1531.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CBV5_9STRA9.120e-1039.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G119_ECTSI2.260e-939.33Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FXY9_ECTSI5.690e-938.20Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11723contigH-elongata_contig11723:310..1889 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11723.1346.1mRNA_H-elongata_contig11723.1346.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11723 310..1904 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11723.1346.1 ID=prot_H-elongata_contig11723.1346.1|Name=mRNA_H-elongata_contig11723.1346.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp
MADCYFRDNVFVCEAGSFIIEVESDDPFGLICSGCGDCEACSLDEPRTAP
GCSSTVEHAISQGGYNATLEWLWIQPGYWRAANDSLEILACYKEDACKGG
ITGSATFCEMGYMGPYCSVCEKNYFSGPGSTCTECSNSNTW
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