prot_H-elongata_contig117104.1337.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig117104.1337.1
Unique Name	prot_H-elongata_contig117104.1337.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	122

Homology

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BLAST of mRNA_H-elongata_contig117104.1337.1 vs. uniprot
Match: A0A6H5KTD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD1_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 1.460e-46
Identity = 79/113 (69.91%), Postives = 95/113 (84.07%), Query Frame = 0

Query:    1 MMACVADWLIAAPFAMLGSIGVVGGIPNFNKALKKAGIEYFHFTAGQQKSLMGPFQEVTKANQVMQQRQIDSVHTAFKRHVGRYRPAADMEEVGTGEVWLGLDAVKHRLVDEV 113
            MMAC+AD L  APFAMLGSIGVVGG+ NFNKALKK G++YF FT+GQ KSL+GPFQEVTK N+ MQQ+Q+D++HTAFK HV RYRP+ D+E VGTGE+WLG  AV+  L D+V
Sbjct:  246 MMACIADELTTAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGQHKSLVGPFQEVTKENKAMQQKQMDAIHTAFKTHVHRYRPSVDIEAVGTGEIWLGQRAVEMHLADKV 358

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BLAST of mRNA_H-elongata_contig117104.1337.1 vs. uniprot
Match: D7G353_ECTSI (Putative periplasmic protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G353_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 1.020e-45
Identity = 79/113 (69.91%), Postives = 96/113 (84.96%), Query Frame = 0

Query:    1 MMACVADWLIAAPFAMLGSIGVVGGIPNFNKALKKAGIEYFHFTAGQQKSLMGPFQEVTKANQVMQQRQIDSVHTAFKRHVGRYRPAADMEEVGTGEVWLGLDAVKHRLVDEV 113
            M+AC+AD L  APFAMLGSIGVVGG+ NFNKALKK G++YFHFT+GQ KSL+GPFQEVTK N+ MQQ+Q+D++H+AFK HV RYRP+ D+E VGTGE+WLG  AV  RL D+V
Sbjct:  618 MIACIADELTTAPFAMLGSIGVVGGMTNFNKALKKYGVDYFHFTSGQHKSLVGPFQEVTKENKAMQQKQMDAIHSAFKTHVHRYRPSVDIEAVGTGEIWLGQRAVDMRLADKV 730

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BLAST of mRNA_H-elongata_contig117104.1337.1 vs. uniprot
Match: A0A369KPC3_9PROT (Protease SohB n=1 Tax=Spirobacillus cienkowskii TaxID=495820 RepID=A0A369KPC3_9PROT)

HSP 1 Score: 121 bits (304), Expect = 7.060e-31
Identity = 59/116 (50.86%), Postives = 77/116 (66.38%), Query Frame = 0

Query:    1 MMACVADWLIAAPFAMLGSIGVVGGIPNFNKALKKAGIEYFHFTAGQQKSLMGPFQEVTKANQVMQQRQIDSVHTAFKRHVGRYRPAADMEEVGTGEVWLGLDAVKHRLVDEVGRS 116
            MMAC+AD +IAAPFA++GSIGV+  +PN NK L K  IEY   TAG+ K  + P  E+T+  +   Q QID VH  FK HV RYRP  D++ V TGE W G+ A+  +L+DE+  S
Sbjct:  180 MMACLADKIIAAPFAIIGSIGVIASMPNLNKLLHKNDIEYLEITAGEYKRTLTPLGEITEKKKAKFQEQIDEVHMLFKNHVQRYRPTLDIDTVATGEYWYGIQALDLQLIDELKTS 295

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BLAST of mRNA_H-elongata_contig117104.1337.1 vs. uniprot
Match: A0A7V1FTF3_9GAMM (Protease SohB n=2 Tax=root TaxID=1 RepID=A0A7V1FTF3_9GAMM)

HSP 1 Score: 120 bits (300), Expect = 2.250e-30
Identity = 60/116 (51.72%), Postives = 81/116 (69.83%), Query Frame = 0

Query:    1 MMACVADWLIAAPFAMLGSIGVVGGIPNFNKALKKAGIEYFHFTAGQQKSLMGPFQEVTKANQVMQQRQIDSVHTAFKRHVGRYRPAADMEEVGTGEVWLGLDAVKHRLVDEVGRS 116
            MMAC+AD ++AAPFAMLGSIGVV  IPNFN+ L+K  I+Y   TAG+ K  +  F E ++  +   Q  ++++H  FK  VGRYRP+ D+E V TGEVW GL+AV ++L DE+  S
Sbjct:  171 MMACIADRILAAPFAMLGSIGVVAQIPNFNRILRKHDIDYEMLTAGEYKRTLTLFGENSEKGREKFQEDLENIHRLFKGFVGRYRPSLDVEAVATGEVWFGLEAVDNQLADEIKTS 286

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BLAST of mRNA_H-elongata_contig117104.1337.1 vs. uniprot
Match: A0A1L4CZ36_9PROT (Protease SohB n=1 Tax=Silvanigrella aquatica TaxID=1915309 RepID=A0A1L4CZ36_9PROT)

HSP 1 Score: 120 bits (300), Expect = 2.920e-30
Identity = 58/113 (51.33%), Postives = 77/113 (68.14%), Query Frame = 0

Query:    1 MMACVADWLIAAPFAMLGSIGVVGGIPNFNKALKKAGIEYFHFTAGQQKSLMGPFQEVTKANQVMQQRQIDSVHTAFKRHVGRYRPAADMEEVGTGEVWLGLDAVKHRLVDEV 113
            MMAC+AD +IAAPFA++GSIGV+  +PN NK L K  IEY   TAG+ K  + P  E+T+  +   Q QI+ VHT FK HV +YR   D++ V TGE W GL A++ +LVDE+
Sbjct:  184 MMACLADKIIAAPFAIIGSIGVIASLPNLNKLLNKNDIEYLEITAGEYKRTLTPLGEITEKKKAKFQEQIEDVHTLFKNHVQKYRNTVDLDVVATGEYWYGLKALELKLVDEL 296

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BLAST of mRNA_H-elongata_contig117104.1337.1 vs. uniprot
Match: A0A432W536_9GAMM (Protease SohB n=1 Tax=Aliidiomarina minuta TaxID=880057 RepID=A0A432W536_9GAMM)

HSP 1 Score: 119 bits (298), Expect = 4.120e-30
Identity = 60/116 (51.72%), Postives = 79/116 (68.10%), Query Frame = 0

Query:    1 MMACVADWLIAAPFAMLGSIGVVGGIPNFNKALKKAGIEYFHFTAGQQKSLMGPFQEVTKANQVMQQRQIDSVHTAFKRHVGRYRPAADMEEVGTGEVWLGLDAVKHRLVDEVGRS 116
            MMACVAD ++AAPFA+LGSIGV+  +PNFNK LKK  I+Y   TAG+ K  +  F E T+  +   Q+ ID VH  FK  VG +RP  DM++V TGE+W G  A++ +LVDE+  S
Sbjct:  168 MMACVADKVVAAPFAILGSIGVLAQLPNFNKLLKKNDIDYEQITAGEYKRTLTLFGENTEDGRKKFQQDIDDVHVLFKNFVGEHRPQLDMDKVATGEIWFGTQALEQKLVDEIMTS 283

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BLAST of mRNA_H-elongata_contig117104.1337.1 vs. uniprot
Match: UPI001D0052C2 (protease SohB n=1 Tax=Gallaecimonas mangrovi TaxID=2291597 RepID=UPI001D0052C2)

HSP 1 Score: 119 bits (297), Expect = 4.630e-30
Identity = 59/116 (50.86%), Postives = 80/116 (68.97%), Query Frame = 0

Query:    1 MMACVADWLIAAPFAMLGSIGVVGGIPNFNKALKKAGIEYFHFTAGQQKSLMGPFQEVTKANQVMQQRQIDSVHTAFKRHVGRYRPAADMEEVGTGEVWLGLDAVKHRLVDEVGRS 116
            MMACV D ++AAPFAMLGSIGV+ GIPN +K LKK  I+Y   TAG+ K  +    E T+  +      ++ +H  F+RHVG+YRPA D++ V TGEVWLG+DA++  L+DE+  S
Sbjct:  167 MMACVGDRIMAAPFAMLGSIGVIAGIPNLHKVLKKHDIDYEQHTAGKFKRTLSMLGENTEEGREKFVADLNVIHGHFRRHVGQYRPALDVDAVATGEVWLGVDALEKGLIDEIATS 282

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BLAST of mRNA_H-elongata_contig117104.1337.1 vs. uniprot
Match: UPI0019C3D4D1 (Protease SohB n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=UPI0019C3D4D1)

HSP 1 Score: 116 bits (291), Expect = 4.830e-30
Identity = 56/116 (48.28%), Postives = 80/116 (68.97%), Query Frame = 0

Query:    1 MMACVADWLIAAPFAMLGSIGVVGGIPNFNKALKKAGIEYFHFTAGQQKSLMGPFQEVTKANQVMQQRQIDSVHTAFKRHVGRYRPAADMEEVGTGEVWLGLDAVKHRLVDEVGRS 116
            MMAC A  +I+APFA++GSIGVV  +PNFN+ALKK  I+Y  +TAG  K  +  F E+T+  +     Q+++ H  FK  VG+YRP  ++++V TGE W G DA+K +LVD++G S
Sbjct:   63 MMACTAHKIISAPFAIVGSIGVVAQLPNFNRALKKHDIDYKEYTAGDFKRTVSLFGEITEKGEKKFIEQLEATHVLFKNFVGKYRPQLNIDQVATGEYWFGEDAIKLKLVDQIGTS 178

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BLAST of mRNA_H-elongata_contig117104.1337.1 vs. uniprot
Match: A0A6C0TWS8_9PSED (Protease SohB n=4 Tax=Pseudomonas TaxID=286 RepID=A0A6C0TWS8_9PSED)

HSP 1 Score: 119 bits (297), Expect = 6.210e-30
Identity = 60/116 (51.72%), Postives = 78/116 (67.24%), Query Frame = 0

Query:    1 MMACVADWLIAAPFAMLGSIGVVGGIPNFNKALKKAGIEYFHFTAGQQKSLMGPFQEVTKANQVMQQRQIDSVHTAFKRHVGRYRPAADMEEVGTGEVWLGLDAVKHRLVDEVGRS 116
            MMAC+ D ++AAPFAMLGSIGVV  IPNFNK L+K  ++Y   TAG+ K  +  F E T   +   Q  ++S+H  FK  VGRYRP  D+E V TGEVW GL+A+++ L DE+  S
Sbjct:  171 MMACIGDRILAAPFAMLGSIGVVAQIPNFNKLLRKHDVDYEMLTAGEYKRTLTIFGENTDKGREKFQEDLESIHRLFKDFVGRYRPILDIESVATGEVWFGLEALENALADELKTS 286

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BLAST of mRNA_H-elongata_contig117104.1337.1 vs. uniprot
Match: UPI001EF54694 (protease SohB n=1 Tax=Psychrobium sp. MM17-31 TaxID=2917758 RepID=UPI001EF54694)

HSP 1 Score: 118 bits (296), Expect = 8.550e-30
Identity = 60/116 (51.72%), Postives = 79/116 (68.10%), Query Frame = 0

Query:    1 MMACVADWLIAAPFAMLGSIGVVGGIPNFNKALKKAGIEYFHFTAGQQKSLMGPFQEVTKANQVMQQRQIDSVHTAFKRHVGRYRPAADMEEVGTGEVWLGLDAVKHRLVDEVGRS 116
            MMAC+AD ++AAPFA++GSIGV+  IPNFNK LKK  I++   TAGQ K  +  F E T+ ++   Q +ID VH  FK HV ++RPA DM++V TGE W G  A+   LVDE+  S
Sbjct:  170 MMACIADKIVAAPFAIIGSIGVIAQIPNFNKVLKKNDIDFEQVTAGQYKRTLTMFGENTEQDREKFQSEIDDVHGLFKDHVAKHRPALDMDKVATGETWYGEQAIDIGLVDELSTS 285

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig117104.1337.1 vs. uniprot

BLAST of mRNA_H-elongata_contig117104.1337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KTD1_9PHAE	1.460e-46	69.91	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G353_ECTSI	1.020e-45	69.91	Putative periplasmic protease n=1 Tax=Ectocarpus s...	[more]
A0A369KPC3_9PROT	7.060e-31	50.86	Protease SohB n=1 Tax=Spirobacillus cienkowskii Ta...	[more]
A0A7V1FTF3_9GAMM	2.250e-30	51.72	Protease SohB n=2 Tax=root TaxID=1 RepID=A0A7V1FTF...	[more]
A0A1L4CZ36_9PROT	2.920e-30	51.33	Protease SohB n=1 Tax=Silvanigrella aquatica TaxID...	[more]
A0A432W536_9GAMM	4.120e-30	51.72	Protease SohB n=1 Tax=Aliidiomarina minuta TaxID=8...	[more]
UPI001D0052C2	4.630e-30	50.86	protease SohB n=1 Tax=Gallaecimonas mangrovi TaxID...	[more]
UPI0019C3D4D1	4.830e-30	48.28	Protease SohB n=1 Tax=Bdellovibrionaceae bacterium...	[more]
A0A6C0TWS8_9PSED	6.210e-30	51.72	Protease SohB n=4 Tax=Pseudomonas TaxID=286 RepID=...	[more]
UPI001EF54694	8.550e-30	51.72	protease SohB n=1 Tax=Psychrobium sp. MM17-31 TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002142	Peptidase S49	PFAM	PF01343	Peptidase_S49	coord: 1..115 e-value: 2.9E-27 score: 95.5
None	No IPR available	GENE3D	3.90.226.10		coord: 1..114 e-value: 8.7E-29 score: 102.2
None	No IPR available	GENE3D	3.40.1750.20		coord: 21..85 e-value: 8.7E-29 score: 102.2
None	No IPR available	PANTHER	PTHR42987	FAMILY NOT NAMED	coord: 1..115
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 27..121
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..26
None	No IPR available	TMHMM	TMhelix		coord: 4..26
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 1..115

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig117104	contig	H-elongata_contig117104:217..1740 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig117104.1337.1	mRNA_H-elongata_contig117104.1337.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig117104 217..1767 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig117104.1337.1 ID=prot_H-elongata_contig117104.1337.1|Name=mRNA_H-elongata_contig117104.1337.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
MMACVADWLIAAPFAMLGSIGVVGGIPNFNKALKKAGIEYFHFTAGQQKS
LMGPFQEVTKANQVMQQRQIDSVHTAFKRHVGRYRPAADMEEVGTGEVWL
GLDAVKHRLVDEVGRSPCRTG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002142	Peptidase_S49
IPR029045	ClpP/crotonase-like_dom_sf