prot_H-elongata_contig117103.1336.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig117103.1336.1
Unique Nameprot_H-elongata_contig117103.1336.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length266
Homology
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BLAST of mRNA_H-elongata_contig117103.1336.1 vs. uniprot
Match: D8LEB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB4_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 1.970e-83
Identity = 157/271 (57.93%), Postives = 180/271 (66.42%), Query Frame = 0 
Query:    1 GHTFPSSSRGGPAVSAASLSSEGMSFNSSG-GDVFAVGFSGGSIAVLDGRCSEGHGMVGGFVAAHRWLERVRCAGPLLMASYGRTKYIETWDVRMLPTR----PPPSRDIVQLLQPPFYAPPAPPRLASLACACSSPDFWVEPHGLTVAVYGAPRNSQRFGAKHAFWSWPK-IGDSTTRSWRRQASGGVCSPTAVTAAATHHGKTLAVPGVVSDSDYRLCLSTGIKFVDTHMATVLDPSRVLVDEVMVNGSGGASKDKKRALSVGSVLLAA 265
            G TFP+  RGG AVS A LSSEGM F SSG G++FAVGF+GG++AV D RC EG GMVGGF   HRWL+R+R AGPLLM SYGRTK IETWD+R LP+R    PPP     +L         APP LA LAC  +SPDFWVEPHGL VAV+GAPR+SQRFGAKHAFW WP+  G   T S    A    CS           G+ + VPGVV+DS YR+CLSTG+KF DTHMATVLD SRVLVDE+ V          +    V S+ LAA
Sbjct:  352 GLTFPTMERGGAAVSMAPLSSEGMPFGSSGSGELFAVGFAGGTVAVFDARCHEGGGMVGGFTTRHRWLKRLRSAGPLLMNSYGRTKNIETWDMRRLPSRATHEPPPGLPSPRLR--------APPCLADLACPANSPDFWVEPHGLCVAVHGAPRHSQRFGAKHAFWPWPRQTGGVATVSTDPNAP--ACSARGDGGGVEIPGRCVVVPGVVNDSGYRMCLSTGVKFTDTHMATVLDSSRVLVDEMAVMPRVSRGSGDREGAGVTSLFLAA 612
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117103.1336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEB4_ECTSI1.970e-8357.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig117103contigH-elongata_contig117103:366..1444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig117103.1336.1mRNA_H-elongata_contig117103.1336.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig117103 366..1444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig117103.1336.1 ID=prot_H-elongata_contig117103.1336.1|Name=mRNA_H-elongata_contig117103.1336.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=266bp
GHTFPSSSRGGPAVSAASLSSEGMSFNSSGGDVFAVGFSGGSIAVLDGRC
SEGHGMVGGFVAAHRWLERVRCAGPLLMASYGRTKYIETWDVRMLPTRPP
PSRDIVQLLQPPFYAPPAPPRLASLACACSSPDFWVEPHGLTVAVYGAPR
NSQRFGAKHAFWSWPKIGDSTTRSWRRQASGGVCSPTAVTAAATHHGKTL
AVPGVVSDSDYRLCLSTGIKFVDTHMATVLDPSRVLVDEVMVNGSGGASK
DKKRALSVGSVLLAA*
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