prot_H-elongata_contig116795.1314.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig116795.1314.1
Unique Nameprot_H-elongata_contig116795.1314.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig116795.1314.1 vs. uniprot
Match: D8LPY1_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY1_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.770e-20
Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 0
Query:   11 RIREVLLSADFTCGFVSPVVLTSDMFDSPTTAMRKGNSFYVVQAKFTVPAEEKATTAYEIIRVDRDAGEFNC 82
            +I EV L+AD +CG ++P  L++ +FD+ TTAMRKGNS Y V AKF V AE+ ATTAYEI+RVDRD+GE  C
Sbjct:  242 QILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDRDSGELVC 313          
BLAST of mRNA_H-elongata_contig116795.1314.1 vs. uniprot
Match: A0A6H5JGY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY3_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 5.830e-20
Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 0
Query:   15 VLLSADFTCGFVSPVVLTSDMFDSPTTAMRKGNSFYVVQAKFTVPAEEKATTAYEIIRVDRDAGEFNC 82
            V L+A+ +CG ++P  L++ +FD+ TTAMRKGNS Y V AKF V AE+ ATTAYEI+RVDRD+GE  C
Sbjct:   93 VSLAANLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDRDSGELAC 160          
BLAST of mRNA_H-elongata_contig116795.1314.1 vs. uniprot
Match: D7FN98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN98_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.700e-19
Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 0
Query:    8 SGMRIREVLLSADFTCGFVSPVVLTSDMFDSPTTAMRKGNSFYVVQAKFTVPAEEKATTAYEIIRVDRDAGEFNC 82
            SG  I EV LSAD +CG V+   L+  MFD+ TTAMRKGNS Y V AKF V  E+  T AYEI+RVDRD+GE  C
Sbjct:  150 SGGEILEVSLSADLSCGSVARRALSHPMFDTQTTAMRKGNSLYAVNAKFGVAEEDVDTAAYEIVRVDRDSGELAC 224          
BLAST of mRNA_H-elongata_contig116795.1314.1 vs. uniprot
Match: D7FZ69_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ69_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 3.330e-18
Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 0
Query:   11 RIREVLLSADFTCGFVSPVVLTSDMFDSPTTAMRKGNSFYVVQAKFTVPAEEKATTAYEIIRVDRDAGEFNC 82
            +I EV LSAD +CG V+   L++ +FD  TTAMRKGNS Y V AK  V  E+ ATTAYEI+RVDRD GE  C
Sbjct:  262 QIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRVDRDGGELAC 333          
BLAST of mRNA_H-elongata_contig116795.1314.1 vs. uniprot
Match: A0A6H5KWQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ6_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 8.510e-18
Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    6 LSSGMRIREVLLSADFTCGFVSPVVLTSDMFDSPTTAMRKGNSFYVVQAKFTVPAEEKATTAYEIIRVDRDAGEF---NCT 83
            L    RI EV L+A+ +CG ++P  L++ + D+ TT+MRKGNS Y V A F V AE+ ATTAY+I+RVD+D+GE    NCT
Sbjct:   92 LLDAARILEVPLAANLSCGSLAPRALSNPLLDTQTTSMRKGNSLYAVNANFGVAAEDVATTAYKIVRVDQDSGESWRANCT 172          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116795.1314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LPY1_ECTSI1.770e-2061.11Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JGY3_9PHAE5.830e-2060.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN98_ECTSI1.700e-1960.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZ69_ECTSI3.330e-1859.72Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KWQ6_9PHAE8.510e-1851.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig116795contigH-elongata_contig116795:201..876 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig116795.1314.1mRNA_H-elongata_contig116795.1314.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig116795 174..876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig116795.1314.1 ID=prot_H-elongata_contig116795.1314.1|Name=mRNA_H-elongata_contig116795.1314.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
MENGGLSSGMRIREVLLSADFTCGFVSPVVLTSDMFDSPTTAMRKGNSFY
VVQAKFTVPAEEKATTAYEIIRVDRDAGEFNCTAM*
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