prot_H-elongata_contig11639.1290.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig11639.1290.1
Unique Name	prot_H-elongata_contig11639.1290.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	169

Homology

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BLAST of mRNA_H-elongata_contig11639.1290.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 4.640e-29
Identity = 80/181 (44.20%), Postives = 100/181 (55.25%), Query Frame = 0

Query:    3 LDVLNIYDRLEYDVIGLQKTRRSGHLAFNQAGYGEC--GGENGGKKRQG--GVGLTIRT----SITRAAHPPEFRSDCLLKVTLELRGRAKAVTFVVVYAPTETQ------NASNKHAFWTNLDRAVEEVPRHDQLFVLMDANACTGMREKGQVGSKDRKILGAYGRDTLNDNGELLLSFA 169
            + V+ I    + DVIGLQ+TRR+G  A    GY     G   G K ++G  GVG+ I+     S+       E  S  L+KV L++ GR   VTFVV YAPTET       + + K +FWT LD  + EV   D L VLMDANA TG R  G     D KI+GAYGRD +N+NGE LL  A
Sbjct:    1 MTVMQICAATDCDVIGLQETRRAGQGAITHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGERLLGLA 177

[Close]

BLAST of mRNA_H-elongata_contig11639.1290.1 vs. uniprot
Match: A0A6H5K9G5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9G5_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 7.410e-28
Identity = 66/172 (38.37%), Postives = 97/172 (56.40%), Query Frame = 0

Query:    1 RALDVLNIYDRLEYDVIGLQKTRRSGHLAFNQAGYG--ECGGENGGKKRQGGVGLTIRTSITRAA-HPPEFRSDCLLKVTLELRGRAKAVTFVVVYAPTETQNASNKHAFWTNLDRAVEEVPRHDQLFVLMDANACTGMREKGQVGSKDRKILGAYGRDTLNDNGELLLSFA 169
            RA  VL+   + +   +GLQ+ RR G   F  +G+    CG + GG     GVG+ +  ++ +A+ +  E+  + L+ +  E+ G   AV FV  YAPT+   A +K  FW  LD  V  +P  + LFVLMDANA TG    G +  ++ + +G YGR+ LNDNG LLL+FA
Sbjct:   64 RADKVLHEAAKQDISFVGLQEVRRPGRTEFTASGFRVFTCGTDKGGTH---GVGIAVEEALCKASQYTTEYVDERLMAMRFEMTGHRGAVNFVAAYAPTDVATADSKRMFWEKLDSLVRRIPAKEYLFVLMDANAQTG----GGIAGENERTMGEYGRNELNDNGRLLLTFA 228

[Close]

BLAST of mRNA_H-elongata_contig11639.1290.1 vs. uniprot
Match: A0A6H5K3U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3U7_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.300e-27
Identity = 62/156 (39.74%), Postives = 90/156 (57.69%), Query Frame = 0

Query:   17 IGLQKTRRSGHLAFNQAGYG--ECGGENGGKKRQGGVGLTIRTSITRAA-HPPEFRSDCLLKVTLELRGRAKAVTFVVVYAPTETQNASNKHAFWTNLDRAVEEVPRHDQLFVLMDANACTGMREKGQVGSKDRKILGAYGRDTLNDNGELLLSFA 169
            +GLQ+ R+ G   F  +G+    CG + GG     GVG+T+  ++ +A+ +  E+  + L+ +  E+ G   AV FV  +APT+   A +K  FW  LD  V  VP  + LFVLMDANA TG    G +  ++   +G YGR+ LNDNG LLL+FA
Sbjct:   19 VGLQEVRKPGRTEFTASGFRVFTCGTDKGGTH---GVGITVEEALCKASQYTMEYVDERLMAMRFEMTGHRGAVNFVAAHAPTDVATADSKRMFWEKLDSLVRRVPAKECLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNDNGRLLLTFA 167

[Close]

BLAST of mRNA_H-elongata_contig11639.1290.1 vs. uniprot
Match: A0A6H5KQZ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ7_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 1.440e-27
Identity = 66/172 (38.37%), Postives = 96/172 (55.81%), Query Frame = 0

Query:    1 RALDVLNIYDRLEYDVIGLQKTRRSGHLAFNQAGYG--ECGGENGGKKRQGGVGLTIRTSITRAA-HPPEFRSDCLLKVTLELRGRAKAVTFVVVYAPTETQNASNKHAFWTNLDRAVEEVPRHDQLFVLMDANACTGMREKGQVGSKDRKILGAYGRDTLNDNGELLLSFA 169
            RA  VL+   +     +GLQ+ RR G   F  +G+    CG + GG     GVG+ +  ++ +++ +  E+  + L+ +  E+ G   AVTFV  YAPT+     +KH FW  LD  V   P  + LFVLMDANA TG    G +  ++ + +G YGR+ LNDNG LLL+FA
Sbjct:   94 RADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFTCGTDKGGTH---GVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG----GGIAGENERTMGEYGRNELNDNGRLLLTFA 258

[Close]

BLAST of mRNA_H-elongata_contig11639.1290.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 1.670e-27
Identity = 66/172 (38.37%), Postives = 97/172 (56.40%), Query Frame = 0

Query:    1 RALDVLNIYDRLEYDVIGLQKTRRSGHLAFNQAGYG--ECGGENGGKKRQGGVGLTIRTSITRAA-HPPEFRSDCLLKVTLELRGRAKAVTFVVVYAPTETQNASNKHAFWTNLDRAVEEVPRHDQLFVLMDANACTGMREKGQVGSKDRKILGAYGRDTLNDNGELLLSFA 169
            RA  VL+   +     +GLQ+ RR G   F  +G+    CG + GG     GVG+ +  ++ +++ +  E+  + L+ +  E+ G   AVTFV  YAPT+     +KH FW  LD  V  +P  + LFVLMDANA TG    G +  ++   +G YGR+ LN+NGELLL+FA
Sbjct:  326 RADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFTCGTDKGGTH---GVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRIPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFA 490

[Close]

BLAST of mRNA_H-elongata_contig11639.1290.1 vs. uniprot
Match: A0A6H5JMM5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM5_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.760e-27
Identity = 79/181 (43.65%), Postives = 99/181 (54.70%), Query Frame = 0

Query:    3 LDVLNIYDRLEYDVIGLQKTRRSGHLAFNQAGYGEC--GGENGGKKRQG--GVGLTIRT----SITRAAHPPEFRSDCLLKVTLELRGRAKAVTFVVVYAPTETQ------NASNKHAFWTNLDRAVEEVPRHDQLFVLMDANACTGMREKGQVGSKDRKILGAYGRDTLNDNGELLLSFA 169
            + V+ I      DVIGLQ+TRR G  +    GY     G   G K ++G  GVG  I+     S+       E  S  L+KV L++ GR   VTFVV YAPTET       + + K +FWT LD A+ EV   D L VLMDANA TG R   +VG  D K++GAYGRD + +NGE LL  A
Sbjct:    1 MTVMQICSPTSCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGRAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR---RVGCCDGKMMGAYGRDIMTNNGERLLGLA 177

[Close]

BLAST of mRNA_H-elongata_contig11639.1290.1 vs. uniprot
Match: A0A6H5K7U5_9PHAE (Reverse transcriptase domain-containing protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U5_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 4.150e-27
Identity = 66/172 (38.37%), Postives = 96/172 (55.81%), Query Frame = 0

Query:    1 RALDVLNIYDRLEYDVIGLQKTRRSGHLAFNQAGYG--ECGGENGGKKRQGGVGLTIRTSITRAA-HPPEFRSDCLLKVTLELRGRAKAVTFVVVYAPTETQNASNKHAFWTNLDRAVEEVPRHDQLFVLMDANACTGMREKGQVGSKDRKILGAYGRDTLNDNGELLLSFA 169
            RA  VL+   +     +GLQ+ RR G   F  +G+    CG + GG     GVG+ +  ++ +++ +  E+  + L+ +  E+ G   AVTFV  YAPT+     +KH FW  LD  V   P  + LFVLMDANA TG    G +  ++   +G YGR+ LN+NGELLL+FA
Sbjct:   39 RADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFTCGTDKGGTH---GVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFA 203

[Close]

BLAST of mRNA_H-elongata_contig11639.1290.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 4.270e-27
Identity = 80/182 (43.96%), Postives = 100/182 (54.95%), Query Frame = 0

Query:    2 ALDVLNIYDRLEYDVIGLQKTRRSGHLAFNQAGYGEC--GGENGGKKRQG--GVGLTIRT----SITRAAHPPEFRSDCLLKVTLELRGRAKAVTFVVVYAPTETQNASN------KHAFWTNLDRAVEEVPRHDQLFVLMDANACTGMREKGQVGSKDRKILGAYGRDTLNDNGELLLSFA 169
             + V+ I      DVIGLQ+TRR+G  +    GY     G   G K ++G  GVG+ I+     S+       E  S  L+KV L++ GR   VTF+V YAPTET   +       K +FWT LD A+ EV   D L VLMDANA TG R KG     D KI+GAYGRD +N+NGE LL  A
Sbjct:  197 VMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGCC---DAKIMGAYGRDIMNNNGERLLGLA 374

[Close]

BLAST of mRNA_H-elongata_contig11639.1290.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 4.280e-27
Identity = 66/172 (38.37%), Postives = 96/172 (55.81%), Query Frame = 0

Query:    1 RALDVLNIYDRLEYDVIGLQKTRRSGHLAFNQAGYG--ECGGENGGKKRQGGVGLTIRTSITRAA-HPPEFRSDCLLKVTLELRGRAKAVTFVVVYAPTETQNASNKHAFWTNLDRAVEEVPRHDQLFVLMDANACTGMREKGQVGSKDRKILGAYGRDTLNDNGELLLSFA 169
            RA  VL+   +     +GLQ+ RR G   F  +G+    CG + GG     GVG+ +  ++ +++ +  E+  + L+ +  E+ G   AVTFV  YAPT+     +KH FW  LD  V   P  + LFVLMDANA TG    G +  ++   +G YGR+ LN+NGELLL+FA
Sbjct:  530 RADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFTCGTDKGGTH---GVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFA 694

[Close]

BLAST of mRNA_H-elongata_contig11639.1290.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 5.370e-27
Identity = 76/182 (41.76%), Postives = 98/182 (53.85%), Query Frame = 0

Query:    2 ALDVLNIYDRLEYDVIGLQKTRRSGHLAFNQAGYGEC--GGENGGKKRQG--GVGLTIRTSITRAAHPPEFRSDC----LLKVTLELRGRAKAVTFVVVYAPTETQNASN------KHAFWTNLDRAVEEVPRHDQLFVLMDANACTGMREKGQVGSKDRKILGAYGRDTLNDNGELLLSFA 169
             + V+ I      DVIGLQ+TRR G  +    GY     G   G K ++G  GVG+ I+ ++  +      + +C    L+KV L + GR   +TFVV YAPTET   +       K +FWT LD  + EV  HD L VLMDANA TG R  G     D KI+G YGRD +N+NGE LL  A
Sbjct:  170 VMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRI-GRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTGRRRDGCC---DAKIMGVYGRDIMNNNGERLLGLA 347

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig11639.1290.1 vs. uniprot

BLAST of mRNA_H-elongata_contig11639.1290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KP87_9PHAE	4.640e-29	44.20	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5K9G5_9PHAE	7.410e-28	38.37	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K3U7_9PHAE	1.300e-27	39.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KQZ7_9PHAE	1.440e-27	38.37	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K319_9PHAE	1.670e-27	38.37	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JMM5_9PHAE	3.760e-27	43.65	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K7U5_9PHAE	4.150e-27	38.37	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K3Q1_9PHAE	4.270e-27	43.96	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JLM6_9PHAE	4.280e-27	38.37	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5L660_9PHAE	5.370e-27	41.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10		coord: 1..169 e-value: 2.7E-13 score: 51.9
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 5..138

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig11639	contig	H-elongata_contig11639:7..528 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig11639.1290.1	mRNA_H-elongata_contig11639.1290.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig11639 7..528 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig11639.1290.1 ID=prot_H-elongata_contig11639.1290.1|Name=mRNA_H-elongata_contig11639.1290.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp
RALDVLNIYDRLEYDVIGLQKTRRSGHLAFNQAGYGECGGENGGKKRQGG
VGLTIRTSITRAAHPPEFRSDCLLKVTLELRGRAKAVTFVVVYAPTETQN
ASNKHAFWTNLDRAVEEVPRHDQLFVLMDANACTGMREKGQVGSKDRKIL
GAYGRDTLNDNGELLLSFA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036691	Endo/exonu/phosph_ase_sf