prot_H-elongata_contig116332.1286.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig116332.1286.1
Unique Nameprot_H-elongata_contig116332.1286.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length67
Homology
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BLAST of mRNA_H-elongata_contig116332.1286.1 vs. uniprot
Match: D7FK92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK92_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 3.710e-23
Identity = 44/67 (65.67%), Postives = 57/67 (85.07%), Query Frame = 0 
Query:    1 GTIVSELKLPDFNPGTLNHCMRRRDMLRIDRENLALMHRIEGVTSAYKKTLLEPKYFQLPHVGLFPR 67
            GTIVSE   PDFNPGTLN+ +R+R+++RIDR+NLALMHR+E  +S Y K L++PKYF+ PH+GLFPR
Sbjct:   61 GTIVSEQTFPDFNPGTLNYRIRQRELVRIDRDNLALMHRLETASSGYNKALVKPKYFRQPHMGLFPR 127
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116332.1286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK92_ECTSI3.710e-2365.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig116332contigH-elongata_contig116332:1162..1362 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig116332.1286.1mRNA_H-elongata_contig116332.1286.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig116332 1162..1362 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig116332.1286.1 ID=prot_H-elongata_contig116332.1286.1|Name=mRNA_H-elongata_contig116332.1286.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
GTIVSELKLPDFNPGTLNHCMRRRDMLRIDRENLALMHRIEGVTSAYKKT
LLEPKYFQLPHVGLFPR
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