prot_H-elongata_contig11624.1280.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11624.1280.1
Unique Nameprot_H-elongata_contig11624.1280.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length242
Homology
BLAST of mRNA_H-elongata_contig11624.1280.1 vs. uniprot
Match: D7G9F7_ECTSI (DA1-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F7_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 2.230e-93
Identity = 144/239 (60.25%), Postives = 172/239 (71.97%), Query Frame = 0
Query:    4 TNEDEALARRLHEQWISEDTAAGGGVGRAGNILQFPDGFV-KLHGNPSISNGVRICAGCGHPIMERTFKHGP-GGIYHAACLPTMAPDLPPCSVCHNNLPMENGRIHFYRHNYFNDLYCPWHHDNTPRCYSCMRLEP-DAKPGGGEEGPFAELQDGRMVCMTCAKTAVVDSAEGSPAFQDVCDFLELELLLPVPREMREVPILVVDSPTLNEQTHRDTSHGGGKEIGIPTTRGLTLAEV 239
            T EDEALARRL EQW+ E+ A  GG G  G   Q+P G + ++ G    + GVRICAGC  PI +  F+ G  G  +H  C+P     LP C VCH  LP ++GR+HFYRHN+F+++YCPWHHD++PRC SCMRLEP    PG G EGPFAEL DGRM+CM CA+TAVVDS+EG+PAFQ+VC F E  L LPV  EMR  P+LVVDSPTLNEQTH D  HG G E G+PTTRGLTL+EV
Sbjct:  141 TVEDEALARRLQEQWLLENAADRGGGGFGG---QWPGGGIGRISGKRPSAPGVRICAGCSMPITDAVFRQGAMGESFHMGCMPGGESPLPACKVCHERLPAQDGRVHFYRHNFFHEVYCPWHHDSSPRCCSCMRLEPMPHPPGKGGEGPFAELSDGRMLCMACAQTAVVDSSEGAPAFQEVCTFFEKVLNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPTTRGLTLSEV 376          
BLAST of mRNA_H-elongata_contig11624.1280.1 vs. uniprot
Match: A0A6H5KFR7_9PHAE (DA1-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR7_9PHAE)

HSP 1 Score: 286 bits (732), Expect = 6.610e-90
Identity = 141/242 (58.26%), Postives = 170/242 (70.25%), Query Frame = 0
Query:    6 EDEALARRLHEQWISEDTAAGGGVG-----RAGNILQFPDGFV-KLHGNPSISNGVRICAGCGHPIMERTFKHGP-GGIYHAACLPTMAPDLPPCSVCHNNLPMENGRIHFYRHNYFNDLYCPWHHDNTPRCYSCMRLEPDAKPGG-GEEGPFAELQDGRMVCMTCAKTAVVDSAEGSPAFQDVCDFLELELLLPVPREMREVPILVVDSPTLNEQTHRDTSHGGGKEIGIPTTRGLTLAEV 239
            EDEALARRL +QW+SE+ A  GG G           Q+P G +    G    + GVRICAGC  PI +  F+ G  G  +H  C+P     LP C VCH  LP ++GRIHFYRHN+F+++YCPWH+D++PRCYSCMRLEP  +P G G EG FAEL DGR++CM CA+TAVVDS+EG+PAFQ+VC F E  L LPV  EMR  P+LVVDSPTLNEQTH D  HG G E G+PTTRGLTL+EV
Sbjct:  203 EDEALARRLQDQWLSENAAGPGGGGFXXXXXXXXXXQWPGGGIGHFSGKGPSALGVRICAGCSMPITDAVFRQGAMGESFHMGCMPGGESPLPACKVCHERLPAQDGRIHFYRHNFFHEVYCPWHNDSSPRCYSCMRLEPMPQPTGKGGEGAFAELSDGRVLCMACAQTAVVDSSEGAPAFQEVCTFFEKVLNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPTTRGLTLSEV 444          
BLAST of mRNA_H-elongata_contig11624.1280.1 vs. uniprot
Match: D8SI95_SELML (LIM zinc-binding domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SI95_SELML)

HSP 1 Score: 105 bits (261), Expect = 1.770e-22
Identity = 79/258 (30.62%), Postives = 114/258 (44.19%), Query Frame = 0
Query:    4 TNEDEALARRLHEQWISEDTAAGGGV-------GRAGNILQFPDGFVKLHGNPSISNGVRI-------------CAGCGHPIMERTFKHGPGGIYHAACLPTMAPDLPPCSVCHNNLPME-NGRIHFYRHNYFNDLYCPWHHD-NTPRCYSCMRLEPDAKPGGGEEGPFAELQDGRMVCMTCAKTAVVDSAEGSPAFQDVCDFLELELLLPVPREMREVPILVVDSPTLNE-QTHRDTSHGGGKEIGIPTTRGLTLAE 238
            T+ DEALAR L E +ISE  +            G  G   +F    V      +I  G  +             C  C  PI    F       YH  C   +    P C VC+  +P   +G I +  H ++   YCP H D NTPRC SC RLE        +   +  L DGR +C+ C  +AV+D+ EG P +Q++ +F E   +    +  +++P+L+V+   LNE + H    H       +  TRGLTL+E
Sbjct:   54 TDNDEALARALQESFISEGPSGFSSXXXXXXPFGGDGRTRRFSGAHVCARCKKTIGPGRFLSCMGGLWHPECFRCTSCNKPISGSEFSVSGNDPYHKDCYKELF--HPRCDVCNLFIPPNYSGLIEYRVHPFWGQRYCPSHEDDNTPRCCSCERLET-------KNNKYVVLDDGRKLCLECMDSAVMDTNEGQPLYQEIINFYEGMNM----KITQQIPMLLVERQALNEARAHESNGHH------LTETRGLTLSE 292          
BLAST of mRNA_H-elongata_contig11624.1280.1 vs. uniprot
Match: E1ZGR9_CHLVA (LIM zinc-binding domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZGR9_CHLVA)

HSP 1 Score: 100 bits (250), Expect = 2.130e-21
Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 0
Query:   54 GVRICAGCGHPIMER---TFKHGPGGIYHAACLPTMAPDLPPCSVCHNNLPME-NGRIHFYRHNYFNDLYCPWH-HDNTPRCYSCMRLEPDAKPGGGEEGPFAELQDGRMVCMTCAKTAVVDSAEGSPAFQDVCDF-LELELLLPVPREMREVPILVVDSPTLNEQTHRDTSHGGGKEIG-IPTTRGLTLAE 238
            G  +CAGC  PI +R    F    G +YH  C    A   P C VC +  P E + RI +    ++   +CP H HD TPRC SC RL P A     +   +AEL+DGR VC+ C  T   D+ +  P + +V  F + + + LPV       P+++VDS  LNE   ++T  G G+  G +   RGLTL E
Sbjct:   19 GCLVCAGCHRPIGDRGGVPFCEREGRLYHLDC--HRAKFHPKCDVCGDYCPEEAHRRIVWSEVAFWRQRFCPHHIHDGTPRCASCERLRPHA-----QADTWAELEDGRQVCLPCLGTITTDTRDAQPLWHNVLSFYVGMGMPLPV-----VPPMMLVDSGALNEAEGQET-RGKGRGAGPVFHVRGLTLTE 197          
BLAST of mRNA_H-elongata_contig11624.1280.1 vs. uniprot
Match: A0A2K3MNE0_TRIPR (Protein DA1-like n=2 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MNE0_TRIPR)

HSP 1 Score: 102 bits (253), Expect = 2.780e-21
Identity = 81/250 (32.40%), Postives = 112/250 (44.80%), Query Frame = 0
Query:    6 EDEALARRLHEQW-ISEDTAAGGGVGRAGNILQFPDGFVKLHG-NPSISNGVRI-------------CAGCGHPIMERTFKHGPGGIYHAACLPTMAPDLPPCSVCHNNLPMEN-GRIHFYRHNYFNDLYCPWH-HDNTPRCYSCMRLEPDAKPGGGEEGPFAELQDGRMVCMTCAKTAVVDSAEGSPAFQDVCDFLELELLLPVPREMREVPILVVDSPTLNEQTHRDTSHGGGKEIGIPTTRGLTLAE 238
            EDE LAR + E   +      G  +     I  FP G+    G N  I  G  +             C  C  PI +  F       YH AC        P C VC + +P    G I +  H ++N  YCP H HDNTPRC SC R+EP    G G    +  L+DGR +C+ C  ++++D+ E  P   D+  F E   +    R  ++VP+L+V+   LNE   R+    G     +P TRGL L+E
Sbjct:   87 EDEQLARAIEESLNVESPPKHGNDINMYQPIQYFPMGYRICAGCNVEIGYGRYLNCLGAFWHPECFRCRACNLPISDYEFSTSGNYPYHKACYKESY--HPKCDVCKHFIPTNPAGLIEYRAHPFWNQHYCPSHEHDNTPRCCSCERMEPQ---GTG----YIALKDGRKLCLECLDSSIMDTNECQPLHADILKFYESINM----RLDQQVPLLLVERQALNEA--REGEKNG--HYHMPETRGLCLSE 319          
BLAST of mRNA_H-elongata_contig11624.1280.1 vs. uniprot
Match: A0A7S3UVT4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVT4_HETAK)

HSP 1 Score: 95.1 bits (235), Expect = 3.590e-21
Identity = 57/136 (41.91%), Postives = 77/136 (56.62%), Query Frame = 0
Query:   61 CGHPIMERTFKHGPGGIYHAACLPTMAPDL--PPCSVCHNNLPMENG--RIHFYRHNYFND-LYCPWH-HDNTPRCYSCMRLEPDA-KPGGGEEGPFAELQDGRMVCMTCAKTAVVDSAEGSPAFQDVCDFLELEL 189
            CG  I   TF+   G +YH  C    A +L  P C+VC   +P + G   + + RH +F D   CP H  D T RC +C R E  A  PGGG  G FA+LQDGR +C+ CA+T +VDSAE  P ++++  + E EL
Sbjct:    1 CGRLIDTPTFRPYEGRLYHPQC----ALELFHPRCNVCGQGIPADPGSREVKYIRHPFFQDEKACPAHARDGTARCCACQRFERRAGAPGGG--GAFADLQDGRKLCLACARTPLVDSAEARPLYEEILLWFETEL 130          
BLAST of mRNA_H-elongata_contig11624.1280.1 vs. uniprot
Match: UPI001FB14F4B (protein DA1-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB14F4B)

HSP 1 Score: 100 bits (250), Expect = 6.380e-21
Identity = 68/219 (31.05%), Postives = 101/219 (46.12%), Query Frame = 0
Query:   49 PSISNGVRICAGCGHPIMERTFKHGPGGIYHAACLPTMAPDLP-------------------------PCSVCHNNLPMENGRIHFYR-HNYFNDLYCPWH--HDNTPRCYSCMRLEPDAKPGGGEEGPFAELQDGRMVCMTCAKTAVVDSAEGSPAFQDVCDFLE-LELLLPVPREMREVPILVVDSPTLNEQTHRDTSHGGGKEIGIPTTRGLTLAE 238
            P  S G RIC GC   I    F +  GGI+H  C      + P                          C VC   +P   G +  YR H ++   YCP H  HD TPRC SC R+EP       ++  + +L DGR +C+ C  + ++D+ +  P + D+ +F E L++     +  ++VP+L+V+ P LNE    +  HG      +P TRGL L+E
Sbjct:  105 PLHSVGFRICTGCNREIGHGRFLNCIGGIWHPECFRCHRCNFPISDYEFSISGGYPYHKSCYKEHYHPKCDVCKQFIPTNGGGLIEYRAHPFWVQKYCPIHEHHDGTPRCCSCERMEP-------QDTTYVDLDDGRKICLECLDSVIMDTNQCQPLYIDIQEFYESLDM-----KVEQQVPLLLVERPALNEAMDGE-KHGHHH---MPETRGLCLSE 307          
BLAST of mRNA_H-elongata_contig11624.1280.1 vs. uniprot
Match: A0A072VEP2_MEDTR (Zinc ion-binding protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072VEP2_MEDTR)

HSP 1 Score: 97.1 bits (240), Expect = 3.750e-20
Identity = 80/250 (32.00%), Postives = 110/250 (44.00%), Query Frame = 0
Query:    6 EDEALARRLHEQWISEDTAAGGGVGRAGNILQFPDGFVKLHG-NPSISNGVRI-------------CAGCGHPIMERTFKHGPGGIYHAACLPTMAPDLPPCSVCHNNLPMEN-GRIHFYRHNYFNDLYCPWH-HDNTPRCYSCMRLEPDAKPGGGEEGPFAELQDGRMVCMTCAKTAVVDSAEGSPAFQDVCDFLE-LELLLPVPREMREVPILVVDSPTLNEQTHRDTSHGGGKEIGIPTTRGLTLAE 238
            EDE LAR + E    E     G       I  FP G+    G N  I  G  +             C  C  PI +  F       +H AC        P C VC + +P    G I +  H ++N  YCP H HDNT RC SC R+EP    G G    +   +DGR +C+ C  +A++D+ E  P   D+  F E + + L      ++VP+L+V+   LNE   R+    G     +P TRGL L+E
Sbjct:   72 EDEQLARAIEESLNLESPPKHGNDNMYQPIQYFPMGYRICAGCNTEIGYGRYLNCLGAFWHPECFRCRACNLPISDYEFSTSGNYPFHKACYKESY--HPKCDVCKHFIPTNPAGLIEYRAHPFWNQHYCPSHEHDNTARCCSCERMEPQ---GTG----YIAHKDGRKLCLECLDSAIMDTNECQPLHADILKFYESINMKL-----NQQVPLLLVERQALNEA--REGEKNG--HYHMPETRGLCLSE 303          
BLAST of mRNA_H-elongata_contig11624.1280.1 vs. uniprot
Match: A0A218Y3R1_PUNGR (LIM zinc-binding domain-containing protein n=3 Tax=Punica granatum TaxID=22663 RepID=A0A218Y3R1_PUNGR)

HSP 1 Score: 98.2 bits (243), Expect = 5.910e-20
Identity = 68/231 (29.44%), Postives = 106/231 (45.89%), Query Frame = 0
Query:   43 VKLHGNPSISNGVRICAGCGHPI-MERTFKHGPGGIYHAACLPTMAPDL-------------------------PPCSVCHNNLPMENGRIHFYRHNYFNDLYCPWHH-DNTPRCYSCMRLEPDAKPGGGEEGPFAELQDGRMVCMTCAKTAVVDSAEGSPAFQDVCDF---LELELLLPVPREMREVPILVVDSPTLNEQTHRDTSHGGGKEIG---IPTTRGLTLAEVR 240
            +++   PS S+  R C GC + I  E       GG++H  CL   A +L                         P C VC N LP   G   +  H+++   YCP H  DNTPRC SC R+EP        +  +  L DGR +C+ C  +A++DS E  P + ++ +F   L++E+        + +P+L+V+   LN+          G++ G   +P TRG+ L+E R
Sbjct:  105 IQISPLPSTSSD-RFCKGCKNQIGQEGQSLRCMGGVWHRDCLKCQACNLLITDKVSMSSEDRLFHESCYKEHHHPKCDVCKNFLPRSTGAAEYRAHHFWMQKYCPSHEQDNTPRCCSCERMEP-------RDMQYMILDDGRRLCLECLSSAIMDSEESKPLYDEIREFYKDLDMEV-------KQHIPLLLVERQALNKAME-------GEKNGHHHLPETRGICLSEER 313          
BLAST of mRNA_H-elongata_contig11624.1280.1 vs. uniprot
Match: A0A7S1GMF0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMF0_CYCTE)

HSP 1 Score: 97.8 bits (242), Expect = 7.040e-20
Identity = 65/192 (33.85%), Postives = 96/192 (50.00%), Query Frame = 0
Query:   58 CAGCGH------PIMERTFKHGPGGIYHAACLPTMAPDLPPCSVCHNNLPM-ENGRIHFYRHNYFN-DLYCPWHHDNTPR-CYSCMRLEPDAKPGGGEEGPFAELQD-GRMVCMTCAKTAVVDSAEGSPAFQDVCDFLELELLLPVPREMREVPILVVDSPTLNEQTHRDTS-HGGGKEIGIPTTRGLTLAE 238
            C GC +      P    T + G     H  C   +      C+VC  ++P   +G++ F +H +F+ +  CP H     R C  C R EP+ +P       FA+L D GR VC  C ++ +VDS +  P +  V  FLE +L LP+ +++R+VPIL+V    LN+Q     + HGG  +I    TRGL L E
Sbjct:   95 CVGCHNTIDSSGPFAYMTDERGDKHPLHRKCYAELYGVK--CAVCRKSIPAGPDGKVSFVKHPFFDSEQMCPRHAQRPGRRCTGCHRFEPEGQP-------FADLNDAGRCVCYACCRSVIVDSEDAQPLWDKVVAFLETKLHLPIWKDLRKVPILIVGYEALNDQMRTTRAVHGGSSQI---MTRGLCLTE 274          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11624.1280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9F7_ECTSI2.230e-9360.25DA1-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KFR7_9PHAE6.610e-9058.26DA1-like domain-containing protein n=1 Tax=Ectocar... [more]
D8SI95_SELML1.770e-2230.62LIM zinc-binding domain-containing protein n=4 Tax... [more]
E1ZGR9_CHLVA2.130e-2136.98LIM zinc-binding domain-containing protein n=1 Tax... [more]
A0A2K3MNE0_TRIPR2.780e-2132.40Protein DA1-like n=2 Tax=Trifolium pratense TaxID=... [more]
A0A7S3UVT4_HETAK3.590e-2141.91Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI001FB14F4B6.380e-2131.05protein DA1-like n=1 Tax=Impatiens glandulifera Ta... [more]
A0A072VEP2_MEDTR3.750e-2032.00Zinc ion-binding protein n=1 Tax=Medicago truncatu... [more]
A0A218Y3R1_PUNGR5.910e-2029.44LIM zinc-binding domain-containing protein n=3 Tax... [more]
A0A7S1GMF0_CYCTE7.040e-2033.85Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.110.10coord: 52..141
e-value: 5.6E-7
score: 31.5
NoneNo IPR availablePANTHERPTHR24209:SF7PROTEIN DA1-RELATED 2coord: 57..239
NoneNo IPR availablePANTHERPTHR24209FAMILY NOT NAMEDcoord: 57..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11624contigH-elongata_contig11624:4108..8620 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11624.1280.1mRNA_H-elongata_contig11624.1280.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11624 4108..8620 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11624.1280.1 ID=prot_H-elongata_contig11624.1280.1|Name=mRNA_H-elongata_contig11624.1280.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=242bp
RRPTNEDEALARRLHEQWISEDTAAGGGVGRAGNILQFPDGFVKLHGNPS
ISNGVRICAGCGHPIMERTFKHGPGGIYHAACLPTMAPDLPPCSVCHNNL
PMENGRIHFYRHNYFNDLYCPWHHDNTPRCYSCMRLEPDAKPGGGEEGPF
AELQDGRMVCMTCAKTAVVDSAEGSPAFQDVCDFLELELLLPVPREMREV
PILVVDSPTLNEQTHRDTSHGGGKEIGIPTTRGLTLAEVRG*
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