prot_H-elongata_contig115802.1251.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig115802.1251.1
Unique Name	prot_H-elongata_contig115802.1251.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	130

Homology

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BLAST of mRNA_H-elongata_contig115802.1251.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 9.410e-65
Identity = 106/116 (91.38%), Postives = 108/116 (93.10%), Query Frame = 0

Query:   14 MAKTPSKKSXXXXXXAGSKKKSNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            MAKTPSKKS      AG KK++NKR ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116

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BLAST of mRNA_H-elongata_contig115802.1251.1 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 185 bits (469), Expect = 3.840e-58
Identity = 95/116 (81.90%), Postives = 104/116 (89.66%), Query Frame = 0

Query:   14 MAKTPSKKSXXXXXXAGSKKKSNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            MAKTPSKKS      AG K K  KR ESYSSYIYKVLKQVHP+TGISK+GMSIMNSFIND+FER+AGE+G+L RY+KKATLSSRE+QT+VRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   15 MAKTPSKKSAKAPKKAGDKVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSS 130

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BLAST of mRNA_H-elongata_contig115802.1251.1 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 183 bits (464), Expect = 1.290e-57
Identity = 94/116 (81.03%), Postives = 106/116 (91.38%), Query Frame = 0

Query:   14 MAKTPSKKSXXXXXXAGSKKKSNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            MAKTPSKK+      AGSK+  NKR+E+YSSYIYKVLKQVHPDTGISKRGMSIMNSFIND+FER+AGE+ +L RYNK++TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:    1 MAKTPSKKAAKAPKKAGSKR--NKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114

[Close]

BLAST of mRNA_H-elongata_contig115802.1251.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 182 bits (463), Expect = 2.140e-57
Identity = 96/118 (81.36%), Postives = 105/118 (88.98%), Query Frame = 0

Query:   14 MAKTPSKKSXXXXXXAGSKKKSNK--RIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            MAKTPSKKS       G K K+ K  RIESYS+YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118

[Close]

BLAST of mRNA_H-elongata_contig115802.1251.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 181 bits (460), Expect = 5.950e-57
Identity = 97/117 (82.91%), Postives = 102/117 (87.18%), Query Frame = 0

Query:   14 MAKTPSKKSXXXXXXAGS-KKKSNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            MAK PSKK+      A   KKK  KR ESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117

[Close]

BLAST of mRNA_H-elongata_contig115802.1251.1 vs. uniprot
Match: K0TPB8_THAOC (Histone H2B n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TPB8_THAOC)

HSP 1 Score: 182 bits (463), Expect = 8.770e-57
Identity = 102/124 (82.26%), Postives = 114/124 (91.94%), Query Frame = 0

Query:    9 STSTKMAKTPSKKSXXXXXX---AGSKKKSNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            ST+T MAKTPSK  XXXXXX   +G KK+S KR+ESYS+YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:   40 STATTMAKTPSKXXXXXXXXXXXSGDKKRSKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 163

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BLAST of mRNA_H-elongata_contig115802.1251.1 vs. uniprot
Match: A0A7S2P1D6_9STRA (Histone H2B n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P1D6_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.280e-56
Identity = 94/119 (78.99%), Postives = 106/119 (89.08%), Query Frame = 0

Query:   14 MAKTPSKKSXXXXXXA---GSKKKSNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            MAKTPSKK+          G+KK+S KR+ESYS+YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:   35 MAKTPSKKAPSKAAKKPTDGAKKRSKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 153

[Close]

BLAST of mRNA_H-elongata_contig115802.1251.1 vs. uniprot
Match: A0A6U6DWX5_9STRA (Histone H2B n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DWX5_9STRA)

HSP 1 Score: 180 bits (456), Expect = 2.660e-56
Identity = 96/123 (78.05%), Postives = 106/123 (86.18%), Query Frame = 0

Query:    7 SLSTSTKMAKTPSKKSXXXXXXAGSKKKSNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            S ST   MAKTPSKK+       G  K+S KR ESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:    1 STSTIVTMAKTPSKKAAAPKKAGG--KRSRKRTESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 121

[Close]

BLAST of mRNA_H-elongata_contig115802.1251.1 vs. uniprot
Match: B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)

HSP 1 Score: 179 bits (454), Expect = 4.580e-56
Identity = 93/116 (80.17%), Postives = 102/116 (87.93%), Query Frame = 0

Query:   14 MAKTPSKKSXXXXXXAGSKKKSNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            MAKTPSK+S      A +  KS KR E+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:    1 MAKTPSKQSAKAPKKAATGTKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 116

[Close]

BLAST of mRNA_H-elongata_contig115802.1251.1 vs. uniprot
Match: B8BX20_THAPS (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B8BX20_THAPS)

HSP 1 Score: 179 bits (454), Expect = 5.200e-56
Identity = 93/120 (77.50%), Postives = 105/120 (87.50%), Query Frame = 0

Query:   14 MAKTPSK----KSXXXXXXAGSKKKSNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            MAKTPSK    K+         KK+S KR+ESYS+YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:    1 MAKTPSKQAPAKAAKKAATGDKKKRSKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 120

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig115802.1251.1 vs. uniprot

BLAST of mRNA_H-elongata_contig115802.1251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWI8_ECTSI	9.410e-65	91.38	Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
A0A6U0X3U9_9STRA	3.840e-58	81.90	Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R...	[more]
H2B_OLILU	1.290e-57	81.03	Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830...	[more]
A0A485K2U0_9STRA	2.140e-57	81.36	Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep...	[more]
A0A836CJ22_9STRA	5.950e-57	82.91	Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
K0TPB8_THAOC	8.770e-57	82.26	Histone H2B n=1 Tax=Thalassiosira oceanica TaxID=1...	[more]
A0A7S2P1D6_9STRA	1.280e-56	78.99	Histone H2B n=2 Tax=Skeletonema marinoi TaxID=2675...	[more]
A0A6U6DWX5_9STRA	2.660e-56	78.05	Histone H2B n=4 Tax=Odontella aurita TaxID=265563 ...	[more]
B7FWR8_PHATC	4.580e-56	80.17	Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re...	[more]
B8BX20_THAPS	5.200e-56	77.50	Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 100..113 score: 90.61 coord: 113..126 score: 92.65 coord: 42..60 score: 84.56 coord: 83..100 score: 56.83 coord: 61..81 score: 67.66
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 32..128 e-value: 1.9E-69 score: 246.7
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 10..128
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 97..119
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 8..105 e-value: 6.5E-19 score: 68.6
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 5..129 e-value: 4.2E-56 score: 190.3
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 15..129
None	No IPR available	PANTHER	PTHR23428:SF214		coord: 10..128

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig115802	contig	H-elongata_contig115802:1000..1389 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig115802.1251.1	mRNA_H-elongata_contig115802.1251.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig115802 1000..1389 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig115802.1251.1 ID=prot_H-elongata_contig115802.1251.1|Name=mRNA_H-elongata_contig115802.1251.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=130bp
VSHISSSLSTSTKMAKTPSKKSAKAPKKAGSKKKSNKRIESYSSYIYKVL
KQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQ
TAVRLMLPGELAKHAVSEGTKAVTKFTSS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000558	Histone_H2B
IPR007125	Histone_H2A/H2B/H3
IPR009072	Histone-fold