prot_H-elongata_contig11569.1240.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11569.1240.1
Unique Nameprot_H-elongata_contig11569.1240.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length292
Homology
BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A6H5KC32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC32_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 4.990e-60
Identity = 103/163 (63.19%), Postives = 125/163 (76.69%), Query Frame = 0
Query:  111 NMTLYRGKGEVAVIKSASGGVGSRGSEKRVKAKR-EPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFL-KGNCDDGDECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKHVEYDRKRRREADS--GDHQSDDE 269
            NMTLYRGKG+VAV+ +      +  ++++   K  EPCLFF ++GKCS+SD+ C Y HD+ KVAVCRAFL KG CD GD+CLLTHAVQ EKMP C++FE+GMCFTPNCPY HVKVS+NAAVCP FLKG+CPDG ACRLKH   D ++R + DS  GDH   DE
Sbjct:  749 NMTLYRGKGQVAVVGTGKEAASAAAAKRKSNNKTGEPCLFFCRFGKCSRSDEECRYVHDRAKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSQNAAVCPRFLKGHCPDGTACRLKHELPDPRKRAKDDSAGGDHGDGDE 911          
BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: D8LB82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB82_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 1.670e-59
Identity = 105/158 (66.46%), Postives = 122/158 (77.22%), Query Frame = 0
Query:  111 NMTLYRGKGEVAVI----KSASGGVGSRGSEKRVKAKREPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFL-KGNCDDGDECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKHVEYD-RKRRREADSG 262
            NMTLYRGKG+VAV+    ++AS       S K+ K   EPCLFF ++GKCSKSD+ C Y HD+ KVAVCRAFL KG CD G++CLLTHAVQ EKMP C++FE+GMCFTPNCPY HVKVS+NAAVCP FLKGYCPDG ACRLKH   D RKR R+  +G
Sbjct:  732 NMTLYRGKGQVAVVGTGKEAASXXXXXXXSNKKTKT-AEPCLFFCRFGKCSKSDEECRYVHDRAKVAVCRAFLRKGGCDKGNKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSQNAAVCPRFLKGYCPDGTACRLKHELPDPRKRARDVTTG 888          
BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A553NNT2_TIGCA (Uncharacterized protein (Fragment) n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NNT2_TIGCA)

HSP 1 Score: 140 bits (352), Expect = 2.370e-34
Identity = 62/109 (56.88%), Postives = 77/109 (70.64%), Query Frame = 0
Query:  147 CLFFSKYGKCSK-SDDSCPYAHDKTKVAVCRAFLKGNCDDG-DECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKHVEYDR 253
            C+FF+K+G+C K +   CPY HD  KVAVCR FL+G+C    DECLLTH V  +KMPAC FF+ G C   +CPY HVKVS +AA+CP F +GYCP G AC L+H   D+
Sbjct:  306 CMFFNKFGRCQKRAQGLCPYLHDPAKVAVCRRFLQGSCPKAADECLLTHKVSPDKMPACKFFQLGQCGRDHCPYNHVKVSADAALCPAFRQGYCPQGQACTLRHAMSDQ 414          
BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A485LIR1_9STRA (Aste57867_21895 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIR1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 4.260e-32
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0
Query:  145 EPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGNCDDGDECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKH 248
            E C+F++K G+C K + +C + HD  K+A+CR FL+G C DG +C L+H +   KMP C  F +GMC    C YRHV VSR+AA+C  F KGYCPDG  CRLKH
Sbjct:  205 EYCMFYNKLGECKKKN-ACLFVHDSRKIAICRKFLRGACHDGAKCKLSHQLDENKMPDCAMFLKGMCTRDGCHYRHVNVSRDAAICEAFHKGYCPDGATCRLKH 307          
BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A8J4PM82_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PM82_9MYCE)

HSP 1 Score: 125 bits (313), Expect = 7.170e-29
Identity = 54/108 (50.00%), Postives = 73/108 (67.59%), Query Frame = 0
Query:  143 KREPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGNCDDGDECLLTHAV-QTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKHV 249
            K++ CL+++++GKC+ S D C Y HDK+K+  C  FL G C D  EC L H +   E+MP C  + +GMC   NCPY HV VS+NA +CP+F KGYCP+G AC +KH 
Sbjct:  344 KKQYCLYYNRFGKCN-SGDKCKYIHDKSKIRTCPKFLSGTCQDS-ECHLKHEITDLEQMPICYLYLKGMCTKVNCPYLHVFVSKNAKLCPDFQKGYCPNGSACTMKHT 449          
BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A024TB83_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TB83_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.130e-22
Identity = 50/106 (47.17%), Postives = 63/106 (59.43%), Query Frame = 0
Query:  145 EPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGNCD-DGDECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNF-LKGYCPDGVACRLKH 248
            E CLF+ K+G+C    D C + HD    ++CR FL+  C  D   C L+H     KMP C  F +G+C    C YRHV VSR+AA+C  F L+GYC DG ACR KH
Sbjct:  202 ELCLFYIKHGECKHKHD-CLFVHDSRTKSICRPFLRDACPHDASTCKLSHCPDQHKMPDCAMFLKGLCSREGCHYRHVNVSRDAALCDAFSLRGYCADGPACRRKH 306          
BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: UPI001F047A1D (uncharacterized protein LOC124436211 n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F047A1D)

HSP 1 Score: 103 bits (258), Expect = 3.480e-21
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 0
Query:  139 RVKAKREPCLFFSKYGKCSK-SDDSCPYAHDKTKVAVCRAFLKGNCDDGD-ECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKHV 249
            +VK  +E C+F++KYGKC+K S   CPY HD +K+AVC  FL+G C   D  CL +H +  +                +CPY HV V   A VC +FLKG+C  G+ C+ KHV
Sbjct:  663 KVKRGKEYCMFYNKYGKCTKHSQGICPYIHDPSKIAVCTRFLQGKCQKTDGSCLFSHKIDKDXXXXXXXXXXXXXXRDDCPYLHVNVGSQALVCEDFLKGFCRLGLKCKKKHV 775          
BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A372QVK4_9GLOM (Uncharacterized protein n=1 Tax=Rhizophagus sp. MUCL 43196 TaxID=1803374 RepID=A0A372QVK4_9GLOM)

HSP 1 Score: 100 bits (248), Expect = 8.830e-21
Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 0
Query:  139 RVKAKREPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGN-CDDGDECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKG-YCPDGVACRLKH 248
            + K   + C ++ KYG+C K  D C Y HD  +V VC+ +LKG+ C   ++C L H      +P C  F +GMC   +C Y HVKVS+ A +C +F+ G YCP G+ CR KH
Sbjct:  155 KTKLVNKYCTYYHKYGRC-KEGDYCAYKHDPNRVEVCKLWLKGSECTLSNKCPLQHVESAHLIPYCRHFCKGMCLKDDCHYTHVKVSKRAPLCKDFMVGRYCPAGMNCRKKH 265          
BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A0A2N1P439_9GLOM (Uncharacterized protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2N1P439_9GLOM)

HSP 1 Score: 100 bits (248), Expect = 1.170e-20
Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 0
Query:  139 RVKAKREPCLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGN-CDDGDECLLTHAVQTEKMPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKG-YCPDGVACRLKH 248
            + K   + C ++ KYG+C K  D C Y HD  +V VC+ +LKG+ C   ++C L H      +P C  F +GMC   +C Y HVKVS+ A +C +F+ G YCP G+ CR KH
Sbjct:  175 KTKLVNKYCTYYHKYGRC-KEGDYCAYKHDPNRVEVCKLWLKGSECTLSNKCPLQHVESAHLIPYCRHFCKGMCLKDDCHYTHVKVSKRAPLCKDFMVGRYCPAGMNCRKKH 285          
BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Match: A7SQV2_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SQV2_NEMVE)

HSP 1 Score: 95.5 bits (236), Expect = 1.330e-20
Identity = 47/120 (39.17%), Postives = 62/120 (51.67%), Query Frame = 0
Query:  147 CLFFSKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGNCDDGD-ECLLTHAVQTEK-----------------MPACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKH 248
            C+++S++GKC+K D  C Y HD +KVAVC  FLKG C + D  C  +H +  EK                 M              +CPY HV VS  AA+C +F+KGYCP G  C+ KH
Sbjct:   11 CMYYSRFGKCNKGD-KCKYIHDPSKVAVCTKFLKGKCKNTDGTCTFSHRIDKEKVYNYIPGKNKKGSIPENMXXXXXXXXXXXXXDDCPYSHVNVSNKAAICEDFVKGYCPLGQQCKKKH 129          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11569.1240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KC32_9PHAE4.990e-6063.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB82_ECTSI1.670e-5966.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A553NNT2_TIGCA2.370e-3456.88Uncharacterized protein (Fragment) n=1 Tax=Tigriop... [more]
A0A485LIR1_9STRA4.260e-3252.88Aste57867_21895 protein n=1 Tax=Aphanomyces stella... [more]
A0A8J4PM82_9MYCE7.170e-2950.00Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A024TB83_9STRA1.130e-2247.17Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
UPI001F047A1D3.480e-2142.48uncharacterized protein LOC124436211 n=1 Tax=Xenia... [more]
A0A372QVK4_9GLOM8.830e-2141.96Uncharacterized protein n=1 Tax=Rhizophagus sp. MU... [more]
A0A2N1P439_9GLOM1.170e-2041.96Uncharacterized protein n=2 Tax=Rhizophagus irregu... [more]
A7SQV2_NEMVE1.330e-2039.17Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 224..250
e-value: 1.3E-4
score: 31.3
coord: 197..222
e-value: 5.9E-4
score: 29.1
coord: 141..169
e-value: 0.004
score: 26.4
coord: 170..195
e-value: 0.83
score: 16.9
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 174..196
score: 9.826
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 224..251
score: 12.624
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 141..170
score: 14.474
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 197..223
score: 10.709
NoneNo IPR availableGENE3D4.10.1000.10coord: 200..289
e-value: 4.1E-8
score: 35.1
coord: 132..199
e-value: 1.2E-10
score: 43.3
NoneNo IPR availablePANTHERPTHR46156FAMILY NOT NAMEDcoord: 106..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11569contigH-elongata_contig11569:746..2491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11569.1240.1mRNA_H-elongata_contig11569.1240.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11569 93..2543 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11569.1240.1 ID=prot_H-elongata_contig11569.1240.1|Name=mRNA_H-elongata_contig11569.1240.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=292bp
MTIWRVGSSNPATSRVGAAIPANTLDAAASFLAAEASRQREKKPPPPSTK
NGFLVAPRVSKPSPSATSTSSLPIKTIALLSKSRARTVASSRAAAVVAVA
RAKNTRVRVRNMTLYRGKGEVAVIKSASGGVGSRGSEKRVKAKREPCLFF
SKYGKCSKSDDSCPYAHDKTKVAVCRAFLKGNCDDGDECLLTHAVQTEKM
PACVFFERGMCFTPNCPYRHVKVSRNAAVCPNFLKGYCPDGVACRLKHVE
YDRKRRREADSGDHQSDDEAANAESRKADEARSKTTGRGTH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH