prot_H-elongata_contig115542.1228.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A0A9Y7J8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y7J8_LYGHE) HSP 1 Score: 106 bits (265), Expect = 2.090e-26 Identity = 55/134 (41.04%), Postives = 83/134 (61.94%), Query Frame = 0
Query: 10 WQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAY--------RDSRKQVSLGKKAMYGLVHAGLLW 135
W +V+RP+GKTV+G+R VF+ K+ DG +E+ K RLV +GF Q+ G HY E+ + +SIR V+++ A E QLD AYL ++EEEIY+E+ + +D +VS +KA+YGL +G +W
Sbjct: 49 WTLVDRPEGKTVVGSRWVFRTKLKADGTVERRKARLVAKGFTQIPGTHYNETYTSVARLSSIRFVIALAAERNLELEQLDFTCAYLNGEIEEEIYMEVPKEIETILGRKTQDRENKVSRIQKALYGLKQSGRMW 182
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 111 bits (277), Expect = 9.850e-26 Identity = 56/128 (43.75%), Postives = 83/128 (64.84%), Query Frame = 0
Query: 8 GVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQVSLGKKAMYGLVHAGLLW 135
GV++ V RP+ + ++G++ VFK K DG++EKYK RLV QGF QV+GI Y E+ +P SIR++L++ A WE Q+DV A+L ++EEEIY+++ ++ S V KKA+YGL A W
Sbjct: 1025 GVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREW 1152
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A5BDW5_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=16 Tax=Vitis vinifera TaxID=29760 RepID=A5BDW5_VITVI) HSP 1 Score: 101 bits (252), Expect = 1.040e-24 Identity = 54/137 (39.42%), Postives = 81/137 (59.12%), Query Frame = 0
Query: 1 MDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAY--RDSRKQVSLGKKAMYGLVHAGLLW 135
M VW +V+ P G +G + VFK K D G IE+YK RLV +GF Q +GI Y E+ SP + S+R++L+++A E +Q+DV A+L ++EEE+Y++ E + D + VS KK++YGL A W
Sbjct: 5 MSSMKCNDVWDLVDLPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVSKLKKSIYGLKQASRQW 141
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A226CZD0_FOLCA (Copia protein n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226CZD0_FOLCA) HSP 1 Score: 107 bits (268), Expect = 1.550e-24 Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 0
Query: 1 MDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQVSLGKKAMYGLVHAGLLW 135
M G W++V+RP GK VL R V+K K + +G IEK+K RLVV+GF QVKG+ Y E+ +P +IR +LS+ AA + Q D+ AYL ++++EE+Y+E E Y V L K +YGL +G W
Sbjct: 256 MRSHSENGTWRLVKRPVGKKVLKNRWVYKIKHNPNGEIEKFKARLVVKGFNQVKGVDYTETFAPVSRYETIRTLLSVAAARKLKLVQFDIGTAYLNSELKEEVYMEQAEGYEIGSDMVYLLDKTLYGLPQSGRAW 390
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A438E4T4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4T4_VITVI) HSP 1 Score: 107 bits (268), Expect = 1.570e-24 Identity = 53/127 (41.73%), Postives = 82/127 (64.57%), Query Frame = 0
Query: 10 WQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRK-QVSLGKKAMYGLVHAGLLW 135
W+VV+ P K +G + ++K K + DG IE+YK RLV QGF Q++GI Y+E SP S+R L+++ A WE Q+DV+ A+L D+EEE+Y++L E ++ + K +V +K++YGL A W
Sbjct: 582 WKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEMFSPVAKMTSVRWFLAVVVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 708
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: UPI00192EECC5 (uncharacterized protein LOC120294339 n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI00192EECC5) HSP 1 Score: 105 bits (262), Expect = 1.890e-24 Identity = 50/128 (39.06%), Postives = 80/128 (62.50%), Query Frame = 0
Query: 8 GVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQVSLGKKAMYGLVHAGLLW 135
G W++V+ P+GK ++G + VF K DG +E+YK RLV +GF Q G+ Y+E+ +P S+R++LS+ AA W QLDV A+L D+EEE+++ L + ++ +V KK++YGL + W
Sbjct: 14 GTWKLVDAPEGKKIVGCKWVFTVKCKLDGSVERYKTRLVAKGFTQTYGVDYQETFAPVAKINSVRILLSLAAAFDWPLHQLDVKNAFLNGDLEEEVFMSLPPGFAETEGKVCRLKKSLYGLKQSPRAW 141
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI) HSP 1 Score: 107 bits (266), Expect = 2.500e-24 Identity = 53/127 (41.73%), Postives = 82/127 (64.57%), Query Frame = 0
Query: 10 WQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRK-QVSLGKKAMYGLVHAGLLW 135
W+VV+ P K +G + ++K K + DG IE+YK RLV QGF Q++GI Y+E+ SP S+R L++ A WE Q+DV+ A+L D+EEE+Y++L E ++ + K +V +K++YGL A W
Sbjct: 113 WKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 239
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A226DCE7_FOLCA (Copia protein n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226DCE7_FOLCA) HSP 1 Score: 107 bits (266), Expect = 3.020e-24 Identity = 56/135 (41.48%), Postives = 81/135 (60.00%), Query Frame = 0
Query: 1 MDGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQVSLGKKAMYGLVHAGLLW 135
M G W++V+RP GK VL R V+K K + +G IEK+K RLVV+GF QVKG+ Y E+ +P +IR +LS+ AA + Q D+ AYL ++++EE+Y+E E Y V + K +YGL +G W
Sbjct: 846 MRSHSENGTWRLVKRPVGKKVLKNRWVYKIKHNPNGEIEKFKARLVVKGFNQVKGVDYTETFAPVSRYETIRTLLSVAAARKLKLVQFDIGTAYLNSELKEEVYMEQAEGYEIGSDMVYILDKTLYGLPQSGRAW 980
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A0A177TV96_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TV96_9BASI) HSP 1 Score: 106 bits (265), Expect = 4.030e-24 Identity = 51/126 (40.48%), Postives = 81/126 (64.29%), Query Frame = 0
Query: 10 WQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRKQVSLGKKAMYGLVHAGLLW 135
W++VE PKG+ V+G+R V+K K+D+DGR +YK RLV QGF Q GI + ++ +P ++IR+++S+ AL +D+ AYL ++EE+Y++ Y D +V L ++A+YGL AG W
Sbjct: 725 WELVELPKGRDVVGSRWVYKLKLDRDGRASRYKGRLVAQGFTQRDGIDFSDTFAPVARLSTIRIIISLALALSLNLGSIDIKTAYLNGKLQEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAGRAW 850
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Match: A5BCC7_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BCC7_VITVI) HSP 1 Score: 106 bits (264), Expect = 5.520e-24 Identity = 53/127 (41.73%), Postives = 81/127 (63.78%), Query Frame = 0
Query: 10 WQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVVQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEEEIYVELLEAYRDSRK-QVSLGKKAMYGLVHAGLLW 135
W+VV+ P K +G + ++K K + DG IE+YK RLV QGF Q++GI Y+E SP S+R L++ A WE Q+DV+ A+L D+EEE+Y++L E ++ + K +V +K++YGL A W
Sbjct: 836 WKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 962 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115542.1228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig115542.1228.1 ID=prot_H-elongata_contig115542.1228.1|Name=mRNA_H-elongata_contig115542.1228.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bpback to top |