prot_H-elongata_contig115118.1204.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig115118.1204.1
Unique Nameprot_H-elongata_contig115118.1204.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length39
Homology
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BLAST of mRNA_H-elongata_contig115118.1204.1 vs. uniprot
Match: D8LCL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL5_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 1.090e-11
Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 0 
Query:    1 MPLVFRLVGRGVGKVSGLIQGGRARMTELSQGGELLQVK 39
            MPLVFRL GRGVGKVSGL+QGGRARM ELSQG +LLQ++
Sbjct:   25 MPLVFRLAGRGVGKVSGLVQGGRARMNELSQGSDLLQLQ 63
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BLAST of mRNA_H-elongata_contig115118.1204.1 vs. uniprot
Match: A0A6H5K8Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Q4_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.560e-11
Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 0 
Query:    1 MPLVFRLVGRGVGKVSGLIQGGRARMTELSQGGELLQVK 39
            MPLVFRL GRGVGKVSGL+QGGRARM ELSQG +LLQ++
Sbjct:   25 MPLVFRLAGRGVGKVSGLVQGGRARMNELSQGSDLLQLQ 63
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115118.1204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCL5_ECTSI1.090e-1182.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8Q4_9PHAE1.560e-1182.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig115118contigH-elongata_contig115118:1951..2067 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig115118.1204.1mRNA_H-elongata_contig115118.1204.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig115118 1951..2079 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig115118.1204.1 ID=prot_H-elongata_contig115118.1204.1|Name=mRNA_H-elongata_contig115118.1204.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=39bp
MPLVFRLVGRGVGKVSGLIQGGRARMTELSQGGELLQVK
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