prot_H-elongata_contig114810.1182.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig114810.1182.1 vs. uniprot
Match: D7FU80_ECTSI (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU80_ECTSI) HSP 1 Score: 336 bits (861), Expect = 1.740e-103 Identity = 173/210 (82.38%), Postives = 192/210 (91.43%), Query Frame = 0
Query: 1 ASQNISTPIITAKLVQDNSKTSARVVKAKIEKTTLGQVSVYMKEVFSATECFISIKLDMETIQDLHLDVTVHSVRQSILKGTYGENRPKILRDLKPQHVIVSAGGHKIKVMPPELTSLKSLRAVETVRPKTFFVLQTLKAVLPGVIVQGIPSVNRAVINVQEPDASAPPGAGSAPQERYHLLVEGYGLAAVMGAPGIDGTRTRSNHIIEV 210
AS+NISTPIITAKLVQD+SKTSARVVKAKIEKTTLGQV+VYMKEVFSA+ECFI+IKLDM +QDLHLD+ VH+VR SILKG +GE RP++LRDLKPQ+V++S GGHKIKVMPPEL+ KS RA ETVRPKTFFVLQ LKAVLPGVIVQGIPSVNRAVINVQE + A +G+AP+ERYHLLVEGYGLAAVMGAPGIDGTRTRSNHIIEV
Sbjct: 1185 ASKNISTPIITAKLVQDDSKTSARVVKAKIEKTTLGQVAVYMKEVFSASECFIAIKLDMHAVQDLHLDINVHTVRHSILKGNFGETRPRVLRDLKPQNVVISGGGHKIKVMPPELSGAKSARAAETVRPKTFFVLQALKAVLPGVIVQGIPSVNRAVINVQENSSGA--ASGAAPKERYHLLVEGYGLAAVMGAPGIDGTRTRSNHIIEV 1392
BLAST of mRNA_H-elongata_contig114810.1182.1 vs. uniprot
Match: A0A7S1D4Y3_CYCTE (DNA-directed RNA polymerase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D4Y3_CYCTE) HSP 1 Score: 197 bits (501), Expect = 3.270e-58 Identity = 112/211 (53.08%), Postives = 147/211 (69.67%), Query Frame = 0
Query: 1 ASQNISTPIITAKLVQDNSKTSARVVKAKIEKTTLGQVSVYMKEVFSATECFISIKLDMETIQDLHLDVTVHSVRQSILKGTYGENRPKILRDLKPQHVIVSAGG-HKIKVMPPELTSLKSLRAVETVRPKTFFVLQTLKAVLPGVIVQGIPSVNRAVINVQEPDASAPPGAGSAPQERYHLLVEGYGLAAVMGAPGIDGTRTRSNHIIEV 210
AS+ ISTPIITAKL QD++K AR+VKA IEKTTLG++S ++KEV+S+ +C+IS++LDMETI+ L L++ ++VR+SIL G G+ R +LR LK Q + V G K++V P S ++ P TFFV+Q LK LP VIVQGIPSVNRAVIN ++ + YHLLVEGYGLA VMG+PG+DG+ T +NHIIEV
Sbjct: 73 ASKLISTPIITAKLDQDDNKVGARIVKAGIEKTTLGEISAHIKEVYSSGKCYISVQLDMETIEQLKLNIDANTVRRSILYGARGQTRAPVLRILKEQSIKVKRGSTSKLRVYLPSQPESAS----SSIPPTTFFVMQALKVTLPQVIVQGIPSVNRAVINEEDKGG----------RTSYHLLVEGYGLAEVMGSPGVDGSHTTTNHIIEV 269
BLAST of mRNA_H-elongata_contig114810.1182.1 vs. uniprot
Match: A0A7S3PXX2_9STRA (DNA-directed RNA polymerase subunit n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXX2_9STRA) HSP 1 Score: 207 bits (527), Expect = 3.690e-58 Identity = 117/211 (55.45%), Postives = 146/211 (69.19%), Query Frame = 0
Query: 1 ASQNISTPIITAKLVQDNSKTSARVVKAKIEKTTLGQVSVYMKEVFSATECFISIKLDMETIQDLHLDVTVHSVRQSILKGTYGENRPKILRDLKPQHVIVSAGGH-KIKVMPPELTSLKSLRAVETVRPKTFFVLQTLKAVLPGVIVQGIPSVNRAVINVQEPDASAPPGAGSAPQERYHLLVEGYGLAAVMGAPGIDGTRTRSNHIIEV 210
AS+NISTPIITA+LVQDN+K ARVVKA IEKTTLGQVS Y+KEV++ ++C+IS++LD++ I L L + V+SVR+SILKG G RP ILR LK HV V G K+++ PE + P +F +Q LK LP VIVQGIPSVNRAVIN ++ + + YHLLVEGYGLA VMG+PGIDG RT +NH+IEV
Sbjct: 1097 ASKNISTPIITAQLVQDNNKIGARVVKAVIEKTTLGQVSSYIKEVYAPSKCYISVELDLKAIDQLKLSIDVYSVRRSILKGVIGHTRPAILRSLKDCHVKVKKGSKAKLRIYIPERSDKPGSNP-----PPLYFAMQALKVALPRVIVQGIPSVNRAVINEEDKEG----------ETSYHLLVEGYGLAEVMGSPGIDGRRTTTNHVIEV 1292
BLAST of mRNA_H-elongata_contig114810.1182.1 vs. uniprot
Match: A0A7S1ZKV2_9STRA (DNA-directed RNA polymerase subunit n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZKV2_9STRA) HSP 1 Score: 202 bits (513), Expect = 2.810e-56 Identity = 117/211 (55.45%), Postives = 150/211 (71.09%), Query Frame = 0
Query: 1 ASQNISTPIITAKLVQDNSKTSARVVKAKIEKTTLGQVSVYMKEVFSATECFISIKLDMETIQDLHLDVTVHSVRQSILKGTYGENRPKILRDLKPQHVIVSAGGH-KIKVMPPELTSLKSLRAVETVRPKTFFVLQTLKAVLPGVIVQGIPSVNRAVINVQEPDASAPPGAGSAPQERYHLLVEGYGLAAVMGAPGIDGTRTRSNHIIEV 210
AS+ ISTPIITAKLVQDN+K +ARVVKA IEKTTLG++++Y+KEV+S+T+C+ISI +DM+ I L L++ +VR SIL+G G+ R +LR LK +V+V G K++VM PE S KS A+ +F +Q LK LP VIVQGIP+VNRAVIN ++ G +E YHLLVEGYGL VMGAPGIDG T++NHIIEV
Sbjct: 1095 ASKLISTPIITAKLVQDNNKIAARVVKAVIEKTTLGEIAIYIKEVYSSTKCYISILIDMDAIDQLRLEIDAFTVRTSILRGARGQTRAPVLRGLKEANVLVKKGSKSKLRVMIPE-KSEKSGAAL-------YFTMQALKVALPLVIVQGIPTVNRAVINAED--------EGKNGKETYHLLVEGYGLPEVMGAPGIDGRNTKTNHIIEV 1289
BLAST of mRNA_H-elongata_contig114810.1182.1 vs. uniprot
Match: A0A6T7J7L8_9STRA (DNA-directed RNA polymerase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7J7L8_9STRA) HSP 1 Score: 188 bits (477), Expect = 8.660e-55 Identity = 108/211 (51.18%), Postives = 142/211 (67.30%), Query Frame = 0
Query: 1 ASQNISTPIITAKLVQDNSKTSARVVKAKIEKTTLGQVSVYMKEVFSATECFISIKLDMETIQDLHLDVTVHSVRQSILKGTYGENRPKILRDLKPQHVIVSAGGH-KIKVMPPELTSLKSLRAVETVRPKTFFVLQTLKAVLPGVIVQGIPSVNRAVINVQEPDASAPPGAGSAPQERYHLLVEGYGLAAVMGAPGIDGTRTRSNHIIEV 210
AS+ ISTPIITA LVQD++K ARVVKA IEKTTLG++S Y+KEV++ +C+++++LDM I+ L L + +VR SIL+G G+ RP +LR LK QHV V G K+++ PE +S R + +FV+Q LK LP VIVQGI +VNRAVIN ++ D A YHLLVEG GL+AVMG+ G+DG T +NHIIEV
Sbjct: 53 ASKVISTPIITATLVQDDNKVGARVVKAGIEKTTLGEISEYIKEVYAPGKCYVTVQLDMNAIEQLKLSIDAFTVRTSILRGARGQTRPAVLRGLKDQHVKVKKGSKSKLRIYVPE----RSERGNASATAPVYFVMQALKVALPLVIVQGIATVNRAVINEEDKDGRA----------SYHLLVEGCGLSAVMGSNGVDGHHTTTNHIIEV 249
BLAST of mRNA_H-elongata_contig114810.1182.1 vs. uniprot
Match: B8C4M1_THAPS (DNA-directed RNA polymerase subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4M1_THAPS) HSP 1 Score: 196 bits (499), Expect = 2.130e-54 Identity = 110/211 (52.13%), Postives = 143/211 (67.77%), Query Frame = 0
Query: 1 ASQNISTPIITAKLVQDNSKTSARVVKAKIEKTTLGQVSVYMKEVFSATECFISIKLDMETIQDLHLDVTVHSVRQSILKGTYGENRPKILRDLKPQHVIVSAGGH-KIKVMPPELTSLKSLRAVETVRPKTFFVLQTLKAVLPGVIVQGIPSVNRAVINVQEPDASAPPGAGSAPQERYHLLVEGYGLAAVMGAPGIDGTRTRSNHIIEV 210
AS+NISTPIITAKLVQD++K AR+VKA IEKTTLG++S+Y+KEV+S+ +C++SI LDM+ I+ L L++ SVR+ ILKG G+ RP ILR L +HV+V G K++V P+ T+F++Q LK LP VIVQGI +VNRAVIN + +YHLLVEGYGLA VMG+PG+DG T +NHIIEV
Sbjct: 1099 ASKNISTPIITAKLVQDDNKVGARIVKAGIEKTTLGEISIYVKEVYSSGDCYLSILLDMDAIRQLRLNIDAVSVRRCILKGVRGQTRPPILRSLTDKHVLVKKGSKSKLRVFVPDKGETP-----------TYFLMQALKVALPRVIVQGISTVNRAVINEENKGGKT----------QYHLLVEGYGLAEVMGSPGVDGRHTTTNHIIEV 1288
BLAST of mRNA_H-elongata_contig114810.1182.1 vs. uniprot
Match: A0A7S3HNI7_9STRA (DNA-directed RNA polymerase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNI7_9STRA) HSP 1 Score: 189 bits (479), Expect = 6.750e-54 Identity = 112/210 (53.33%), Postives = 148/210 (70.48%), Query Frame = 0
Query: 1 ASQNISTPIITAKLVQDNSKTSARVVKAKIEKTTLGQVSVYMKEVFSATECFISIKLDMETIQDLHLDVTVHSVRQSILKGTYGENRPKILRDLKPQHVIVSAGGHKIKVMPPELTSLKSLRAVETVRPKTFFVLQTLKAVLPGVIVQGIPSVNRAVINVQEPDASAPPGAGSAPQERYHLLVEGYGLAAVMGAPGIDGTRTRSNHIIEV 210
AS ISTPII A+LVQ +S TSAR+VKA+IEKTTLG+V+ Y+KEV +I+IKLD ETIQ+LHL+VT SV+ +IL G RP ILR LK +H+ +S G+KIK+ PPE + + + + K +FV+Q LKA LP VIVQGIP+V+RAVIN +E D SA ++ ++LLVEGYGL VMG PG+ G ++SNHI+E+
Sbjct: 182 ASGEISTPIIEARLVQSDSMTSARIVKAQIEKTTLGEVAQYIKEVNRPMTSYIAIKLDSETIQNLHLNVTAASVKHAILYGPSSTTRPAILRLLKERHISISDKGNKIKIYPPEQKD--TAKGIPS-HQKVYFVIQALKAALPQVIVQGIPTVSRAVIN-EELD--------SAGKKNFYLLVEGYGLQEVMGCPGVMGDSSKSNHIMEL 379
BLAST of mRNA_H-elongata_contig114810.1182.1 vs. uniprot
Match: K0T0J0_THAOC (DNA-directed RNA polymerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T0J0_THAOC) HSP 1 Score: 194 bits (492), Expect = 1.480e-53 Identity = 112/210 (53.33%), Postives = 144/210 (68.57%), Query Frame = 0
Query: 2 SQNISTPIITAKLVQDNSKTSARVVKAKIEKTTLGQVSVYMKEVFSATECFISIKLDMETIQDLHLDVTVHSVRQSILKGTYGENRPKILRDLKPQHVIVSAGGH-KIKVMPPELTSLKSLRAVETVRPKTFFVLQTLKAVLPGVIVQGIPSVNRAVINVQEPDASAPPGAGSAPQERYHLLVEGYGLAAVMGAPGIDGTRTRSNHIIEV 210
S+NISTPIITAKLVQDN+K AR+VKA IEKTTLG++S+ +KEV+S+++C++SI+LDM+ I+ L L++ SVR+ ILKGT G+ RP +LR L +HV+V G K++V P S T+F +Q LK LPGVIVQGI SVNRAVIN + G P YHLLVEG GLA VMG+PG+DG T +NHI+EV
Sbjct: 699 SKNISTPIITAKLVQDNNKVGARIVKAGIEKTTLGEISICIKEVYSSSDCYLSIQLDMKAIEQLRLNIDAVSVRRCILKGTRGQTRPAVLRGLLEKHVLVKKGSKSKLRVYVPTDKS----------DSPTYFTMQALKVALPGVIVQGISSVNRAVINEES--------KGGKPS--YHLLVEGCGLAEVMGSPGVDGKFTTTNHIMEV 888
BLAST of mRNA_H-elongata_contig114810.1182.1 vs. uniprot
Match: A0A7S1FY33_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY33_9STRA) HSP 1 Score: 192 bits (488), Expect = 6.430e-53 Identity = 109/211 (51.66%), Postives = 143/211 (67.77%), Query Frame = 0
Query: 1 ASQNISTPIITAKLVQDNSKTSARVVKAKIEKTTLGQVSVYMKEVFSATECFISIKLDMETIQDLHLDVTVHSVRQSILKGTYGENRPKILRDLKPQHVIVSAGGH-KIKVMPPELTSLKSLRAVETVRPKTFFVLQTLKAVLPGVIVQGIPSVNRAVINVQEPDASAPPGAGSAPQERYHLLVEGYGLAAVMGAPGIDGTRTRSNHIIEV 210
AS+ ISTPIITAKLV+D++K ARVVK IEKTTLG+++ Y+KEV+S C++S+KLDM I+ L L V SVR SIL+G G+ +P LR LK +V++ G K++++ PE T+ +P +F +Q LK LP VIVQGIPSVNRAVIN +E D + YHLL+EGYGLA VMGAPG+DG +T +NH+IEV
Sbjct: 1179 ASKLISTPIITAKLVRDDNKVGARVVKGVIEKTTLGELAEYIKEVYSPKHCYLSVKLDMGAIEQLKLAVDAVSVRTSILRGVPGQTKPPTLRFLKEGNVLIKRGSRSKLRIIIPENTAAN--------QPPAYFYMQALKIHLPNVIVQGIPSVNRAVINEEEKDG----------KPSYHLLIEGYGLAEVMGAPGVDGLKTTTNHLIEV 1371
BLAST of mRNA_H-elongata_contig114810.1182.1 vs. uniprot
Match: A0A7S4NGV3_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NGV3_9STRA) HSP 1 Score: 191 bits (484), Expect = 2.210e-52 Identity = 106/211 (50.24%), Postives = 145/211 (68.72%), Query Frame = 0
Query: 1 ASQNISTPIITAKLVQDNSKTSARVVKAKIEKTTLGQVSVYMKEVFSATECFISIKLDMETIQDLHLDVTVHSVRQSILKGTYGENRPKILRDLKPQHVIVSAGGH-KIKVMPPELTSLKSLRAVETVRPKTFFVLQTLKAVLPGVIVQGIPSVNRAVINVQEPDASAPPGAGSAPQERYHLLVEGYGLAAVMGAPGIDGTRTRSNHIIEV 210
AS+ ISTPIITA+LVQ+++K ARVVKA IEKTTLG+++ +KEV++ + +IS++LDM+ I+ L L++ ++VR SIL+G G+ RP +LR LK HV V G K++V P+ + K+ + P +F +Q LK LP VIV+GIP+VNRAVIN ++ D YHLLVEGYGLA VMG+PG+DG RT +NHIIEV
Sbjct: 1104 ASKLISTPIITARLVQNDNKVGARVVKAGIEKTTLGEIATCIKEVYAPNKTYISVQLDMDAIEQLKLEIDAYTVRTSILRGARGQTRPPVLRSLKETHVRVKKGSKSKLRVYIPDPSEKKANQ------PPLYFAMQALKVALPDVIVRGIPTVNRAVINEEDEDGKT----------TYHLLVEGYGLAEVMGSPGVDGRRTTTNHIIEV 1298 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114810.1182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig114810.1182.1 ID=prot_H-elongata_contig114810.1182.1|Name=mRNA_H-elongata_contig114810.1182.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=210bpback to top |