prot_H-elongata_contig11474.1173.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11474.1173.1
Unique Nameprot_H-elongata_contig11474.1173.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length92
Homology
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BLAST of mRNA_H-elongata_contig11474.1173.1 vs. uniprot
Match: D7G1C5_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C5_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 9.150e-46
Identity = 77/92 (83.70%), Postives = 83/92 (90.22%), Query Frame = 0 
Query:    1 MRLLRETVIMKWKSINRSYQGSLLGDTLLHRVCREGYLEALKFMLNPNSKSNFETEKLDPNIVNKRKRTPLMLCFTSPQFTTITKNFGLMKD 92
            MRLLRETVIMKWK INRSYQG LLG+T+LHRVCREGYL ALKFML+PNSKS FETE +DPNI+NKRKRT LMLCFTSP FT ITKNFGL +D
Sbjct:   93 MRLLRETVIMKWKDINRSYQGPLLGETVLHRVCREGYLGALKFMLDPNSKSIFETETVDPNILNKRKRTALMLCFTSPHFTEITKNFGLEQD 184
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BLAST of mRNA_H-elongata_contig11474.1173.1 vs. uniprot
Match: A0A6H5K2B1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B1_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 2.040e-43
Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 0 
Query:    1 MRLLRETVIMKWKSINRSYQGSLLGDTLLHRVCREGYLEALKFMLNPNSKSNFETEKLDPNIVNKRKRTPLMLCFTSPQFTTITKNFGLMKD 92
            MRLLRETVIMKWK INRSYQG LLG+T+LHRVCREGYL ALKFML+PNSKS FETE +DPNI NKRKRT LMLCFTSP FT I K+FGL +D
Sbjct:   93 MRLLRETVIMKWKDINRSYQGPLLGETVLHRVCREGYLGALKFMLDPNSKSIFETETVDPNIPNKRKRTALMLCFTSPHFTEIAKHFGLEQD 184
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BLAST of mRNA_H-elongata_contig11474.1173.1 vs. uniprot
Match: F0YPL7_AURAN (JmjC domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPL7_AURAN)

HSP 1 Score: 77.8 bits (190), Expect = 1.000e-14
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 0 
Query:    2 RLLRETVIMKWKSINRSYQGSLLGDTLLHRVCREGYLEALKFMLNPNSKSNFETEKLDPNIVNKRKRTPLMLCFTSPQFTTITKNFGLMKD 92
            R LRE +I  +  +N+ Y G+   DTLLH VCREGYL  ++FM++P + S F+T ++D N  N + RTPL + FT PQ T   +  G+  D
Sbjct:  401 RELREIIIGHFAQVNKRY-GAWDNDTLLHIVCREGYLRMVEFMVDPKNVSQFDTTEIDFNAENNKWRTPLHVVFTPPQETYCARKIGVHDD 490
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BLAST of mRNA_H-elongata_contig11474.1173.1 vs. uniprot
Match: F0Y8C8_AURAN (JmjC domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8C8_AURAN)

HSP 1 Score: 77.8 bits (190), Expect = 1.020e-14
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 0 
Query:    2 RLLRETVIMKWKSINRSYQGSLLGDTLLHRVCREGYLEALKFMLNPNSKSNFETEKLDPNIVNKRKRTPLMLCFTSPQFTTITKNFGLMKD 92
            R LRE +I  +  +N+ Y G+   DTLLH VCREGYL  ++FM++P + S F+T ++D N  N + RTPL + FT PQ T   +  G+  D
Sbjct: 1181 RELREIIIGHFAQVNKRY-GAWDNDTLLHIVCREGYLRMVEFMVDPKNVSQFDTTEIDFNAENNKWRTPLHVVFTPPQETYCARKIGVHDD 1270
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11474.1173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1C5_ECTSI9.150e-4683.70Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5K2B1_9PHAE2.040e-4381.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YPL7_AURAN1.000e-1443.96JmjC domain-containing protein (Fragment) n=1 Tax=... [more]
F0Y8C8_AURAN1.020e-1443.96JmjC domain-containing protein n=1 Tax=Aureococcus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 5..84
e-value: 2.3E-6
score: 29.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 16..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11474contigH-elongata_contig11474:6888..7602 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11474.1173.1mRNA_H-elongata_contig11474.1173.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11474 6858..7602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11474.1173.1 ID=prot_H-elongata_contig11474.1173.1|Name=mRNA_H-elongata_contig11474.1173.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
MRLLRETVIMKWKSINRSYQGSLLGDTLLHRVCREGYLEALKFMLNPNSK
SNFETEKLDPNIVNKRKRTPLMLCFTSPQFTTITKNFGLMKD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf