prot_H-elongata_contig114508.1155.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114508.1155.1
Unique Nameprot_H-elongata_contig114508.1155.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
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BLAST of mRNA_H-elongata_contig114508.1155.1 vs. uniprot
Match: A0A6H5JSX4_9PHAE (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX4_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 7.460e-48
Identity = 82/134 (61.19%), Postives = 109/134 (81.34%), Query Frame = 0 
Query:    1 MPGAGKSNLGNRLLDYPASDPFEEGEGTAGVSTTTQTKRAEFSDLIVIDTPGFPNKDIHTTVRSFDVILQSIRREGSLSTLLFLLNQEEVCPSEFGKYAVLLEQFNHLSCSKLMVCRQPESFTRRNKRTQDEKR 134
            MP AGKSNL N+LL++P  D FEEG+GT G  +TT+T+R E++DL+VIDTPGFP  D  TT ++FD +++++RREGSLSTL+FL+ QEEV P+EF  YAVLL Q NHL CSKL+VCRQ  + +RR+KRT++E+R
Sbjct:   41 MPRAGKSNLANKLLNHPTWDAFEEGDGTYG--STTETQRVEWADLVVIDTPGFPGHDPKTTSKNFDALVKALRREGSLSTLIFLVQQEEVSPTEFRDYAVLLRQLNHLPCSKLIVCRQA-ALSRRHKRTEEERR 171
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114508.1155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JSX4_9PHAE7.460e-4861.19G domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 2..86
e-value: 2.6E-5
score: 24.2
NoneNo IPR availableGENE3D3.40.50.300coord: 1..133
e-value: 9.8E-9
score: 37.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114508contigH-elongata_contig114508:1059..1460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114508.1155.1mRNA_H-elongata_contig114508.1155.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114508 1047..1460 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114508.1155.1 ID=prot_H-elongata_contig114508.1155.1|Name=mRNA_H-elongata_contig114508.1155.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
MPGAGKSNLGNRLLDYPASDPFEEGEGTAGVSTTTQTKRAEFSDLIVIDT
PGFPNKDIHTTVRSFDVILQSIRREGSLSTLLFLLNQEEVCPSEFGKYAV
LLEQFNHLSCSKLMVCRQPESFTRRNKRTQDEKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027417P-loop_NTPase