prot_H-elongata_contig114400.1148.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114400.1148.1
Unique Nameprot_H-elongata_contig114400.1148.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length198
Homology
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 3.050e-89
Identity = 139/194 (71.65%), Postives = 157/194 (80.93%), Query Frame = 0
Query:    4 TARMMSDTTTIAEAPGVEKDPAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLLGPIS 197
            T  MMSD   + E       P GELTELARLEIR+G I+EI RHPDADSLY+EKVD+G G EE PRTIVSGLV+FCE+SDLLGR+VVVLCNLKPV+MKGV SAGMLLC SN  H++V+PLCPPEGVPL ELVT +GHL SPV+AGNRAGK WK+ SKTL VDD++ A+FTGE LP  FMTS G ITSPL G IS
Sbjct:   66 TMMMMSDAA-VTEEEAAPAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGRDVVVLCNLKPVNMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSEEAKFTGEKLPATFMTSKGPITSPLPGSIS 258          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A835YNH3_9STRA (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH3_9STRA)

HSP 1 Score: 226 bits (577), Expect = 7.890e-72
Identity = 116/174 (66.67%), Postives = 137/174 (78.74%), Query Frame = 0
Query:   24 PAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLLGPIS 197
            P G+LTELARLE+RVG I+EI RHPDAD LY+EK+DIG      PRTIVSGLV++C ++DLL R+VV+L NLKPV+M+GV SAGM+LC SN  HT+V PL PPEG PL ELVT EGHL++PVEAGNRA K WKKV+KT+ V +  VARFT E LP  F TS G +TSPL G IS
Sbjct:   73 PVGQLTELARLEMRVGRIVEIGRHPDADGLYVEKIDIGEPAG--PRTIVSGLVAYCSEADLLNRDVVILANLKPVNMRGVESAGMVLCSSNADHTQVAPLVPPEGTPLGELVTFEGHLAAPVEAGNRAVKAWKKVAKTVAVGEDGVARFTDEALPAAFATSKGVVTSPLPGNIS 244          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA)

HSP 1 Score: 184 bits (467), Expect = 8.910e-54
Identity = 99/182 (54.40%), Postives = 126/182 (69.23%), Query Frame = 0
Query:   16 EAPGVEKDPAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLLGPIS 197
            E   V + P GELTEL+RLEIR G ILEI+RHP+AD LY+EK+D+G    + PRTIVSGLV +  + +LLGR VVVL NLKP ++KG+ S GMLLC SN  HT VKPL PP GV L EL+T EGH ++P   GNRAGK + +V++ L   +  +A + G     PFMTS G +T+ + G IS
Sbjct:  185 ETGKVVEAPKGELTELSRLEIRTGKILEISRHPEADGLYVEKIDLGEA--DGPRTIVSGLVKYQTEEELLGREVVVLANLKPRALKGITSHGMLLCASNEDHTVVKPLSPPPGVALGELITFEGHRAAPEPPGNRAGKAFDRVAEELGAGEDMIATYKGI----PFMTSKGPVTTGMAGSIS 360          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A7S2V4I0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I0_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.090e-51
Identity = 96/174 (55.17%), Postives = 120/174 (68.97%), Query Frame = 0
Query:   24 PAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLLGPIS 197
            PAGEL E +RLEIRVG I++++ HPDAD LY+EK+D G   E+EPRTIVSGLV + +  DLL R+VVVL NLKP +M+G+ S GMLLC SN  H++V PL PPE     EL+T EG LS P+E  NRA K + KV+K L V+D   A F G+    PF+T  G  TS + G IS
Sbjct:   79 PAGELNEFSRLEIRVGKIVDVSVHPDADGLYVEKIDCG---EDEPRTIVSGLVKYLKAEDLLDRSVVVLANLKPRAMRGITSHGMLLCASNEDHSQVVPLSPPESSVPGELITVEGTLSQPLEPCNRASKAFDKVAKDLYVNDDLQATFDGK----PFLTPNGPCTSTMKGAIS 245          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD)

HSP 1 Score: 174 bits (441), Expect = 2.110e-51
Identity = 90/164 (54.88%), Postives = 114/164 (69.51%), Query Frame = 0
Query:   28 LTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSP 191
            LTEL+RLEIRVG ++E  RHPDAD+LY+EKVD+G   E+EPRTIVSGLV+F  + +L GR V+VLCNLKP +M+G+ S GMLLC SN  HT+V PL  P    +  L+T EGH ++P++AGNRA K + KV+     D   +ARF       PFMT  GA  SP
Sbjct:   68 LTELSRLEIRVGKVVECERHPDADTLYVEKVDVG---EDEPRTIVSGLVNFMSQEELNGRTVIVLCNLKPRAMRGIKSHGMLLCASNEDHTKVDPLTAPPDAAIGSLITFEGHRAAPMDAGNRASKAFDKVASEFNTDADGIARFNAT----PFMTEAGACYSP 224          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A7S0XDL6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL6_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.540e-51
Identity = 91/171 (53.22%), Postives = 117/171 (68.42%), Query Frame = 0
Query:   27 ELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLLGPIS 197
            ELTEL+RLEIRVG I+E+ RHP+AD LY+EK+D+G      PRTIVSGLV FC    LL  NV+VLCNLKP ++KG+ S GM+LC ++   T+V PL PP   P+ +L+T EGHLS PVE GNRA K + K++    V++  VA + G     PF T  G +TS L+G IS
Sbjct:   51 ELTELSRLEIRVGKIVEVGRHPEADGLYVEKIDLGEPTG--PRTIVSGLVQFCTVDRLLNNNVIVLCNLKPRALKGITSNGMVLCTTSKDETKVDPLIPPPDAPIGQLITFEGHLSEPVEPGNRATKAFTKIADGFYVNEQGVATYNGI----PFSTPNGPVTSTLIGKIS 215          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A7S2R5F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5F0_9STRA)

HSP 1 Score: 173 bits (439), Expect = 5.200e-51
Identity = 89/172 (51.74%), Postives = 122/172 (70.93%), Query Frame = 0
Query:   21 EKDPAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPL 192
            E  P GE+TEL+RLEIRVG ILE+  HP  + +++EK+D+G   E+EPRTI SGL  + ++ DLL ++ +VLCNLKP  + GV S GM+LC S+ +HT+V+ + PP GV   ELVT +GHL++PV+AGNRA K +KKV+   + DD+  A FTGE     F TS+G  TSP+
Sbjct:   66 EVAPVGEMTELSRLEIRVGKILEVAVHPTKEKIFVEKIDVG---EDEPRTICSGLRDYLKEDDLLNKDCIVLCNLKPRDLDGVPSNGMVLCASDAEHTDVQLVVPPAGVAAGELVTFDGHLAAPVDAGNRAVKAFKKVAGLFKTDDSGAAVFTGEPASS-FQTSSGPCTSPI 233          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A7S3M138_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M138_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.630e-50
Identity = 104/187 (55.61%), Postives = 123/187 (65.78%), Query Frame = 0
Query:   12 TTIAEAPGVEKDPAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLL-GPIS 197
            TT+A A      P+G+  E   LEIRVG ILEI +HP+ADSLY+EKVD+G      PRTIVSGLV FC    LL R+VVVLCNLKP + KG+ S GMLLC SN    +V+PL PP GVP  ELV+ EGH+  P E GNRA K + KVS    V D+ +A + G     PFMTS G ITS +L GPIS
Sbjct:   61 TTVAPAA----KPSGDSIEA--LEIRVGKILEIGKHPEADSLYVEKVDLGES--SGPRTIVSGLVEFCTAEYLLNRDVVVLCNLKPRAFKGINSQGMLLCSSNKADGKVEPLIPPAGVPAGELVSFEGHVIKPEEPGNRATKAYTKVSGDFVVSDSGIATYKGI----PFMTSKGPITSTILKGPIS 235          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A2V3IUX7_9FLOR (Putative methionine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX7_9FLOR)

HSP 1 Score: 172 bits (437), Expect = 3.270e-50
Identity = 96/180 (53.33%), Postives = 119/180 (66.11%), Query Frame = 0
Query:   11 TTTIAEAPGVEKD----PAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTG 186
            T   A+AP    D    P   LTEL+RLEIRVG I+E  +HPDAD+LY+EKVD+G   EEEPRTIVSGLV +     ++GR+VVVLCNLKP +M+GV S GMLLC SN  HT V PLC P+  P+ ELVT EGH S+P++  NRA K + +V+  L  ++  VA F       PF TS G
Sbjct:   94 TVATAQAPAAVGDGDSAPDLPLTELSRLEIRVGKIIECEKHPDADTLYVEKVDVG---EEEPRTIVSGLVKYIPLEKMVGRSVVVLCNLKPRAMRGVTSHGMLLCASNEDHTVVDPLCAPQDTPIGELVTFEGHKSAPIDPSNRATKAFDRVADGLSTNEAGVAMFEDV----PFSTSAG 266          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A5J4Z2W6_PORPP (Putative methionine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2W6_PORPP)

HSP 1 Score: 170 bits (431), Expect = 1.410e-49
Identity = 95/172 (55.23%), Postives = 120/172 (69.77%), Query Frame = 0
Query:   28 LTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSP--LLGPIS 197
            LTEL+RLEIRVG I++  +HP+ADSLY+E+VD+G   E   R IVSGLVSF    +++ R V+VLCNLKP +M+G+ S GMLLC SN  H++V PL  PEGVP+  LVT EGH S P  AGNRA K + KV+K+L  D T VA F  E +P  F T +G   SP  L+GP+S
Sbjct:   92 LTELSRLEIRVGKIIKCEKHPEADSLYVEEVDVGD--ESGARVIVSGLVSFVPLEEMVDRTVIVLCNLKPRNMRGISSHGMLLCASNEDHSQVDPLTAPEGVPIGALVTFEGHRSEPAPAGNRASKAFDKVAKSLRTDATGVAMF--EQVP--FATPSGPCFSPKKLVGPVS 257          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMW6_ECTSI3.050e-8971.65Endothelial monocyte-activating polypeptide II pro... [more]
A0A835YNH3_9STRA7.890e-7266.67Endothelial monocyte-activating polypeptide II pro... [more]
W7U6C4_9STRA8.910e-5454.40Endothelial monocyte-activating polypeptide ii pro... [more]
A0A7S2V4I0_9STRA1.090e-5155.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0ZE83_9RHOD2.110e-5154.88Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A7S0XDL6_9STRA2.540e-5153.22Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2R5F0_9STRA5.200e-5151.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3M138_9STRA2.630e-5055.61Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A2V3IUX7_9FLOR3.270e-5053.33Putative methionine--tRNA ligase n=1 Tax=Gracilari... [more]
A0A5J4Z2W6_PORPP1.410e-4955.23Putative methionine--tRNA ligase n=1 Tax=Porphyrid... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 36..130
e-value: 7.9E-26
score: 90.0
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 30..136
score: 27.785
NoneNo IPR availableGENE3D2.40.50.140coord: 27..195
e-value: 4.7E-45
score: 155.3
NoneNo IPR availablePANTHERPTHR11586:SF39NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEINcoord: 22..191
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 22..191
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 31..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114400contigH-elongata_contig114400:1080..1673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114400.1148.1mRNA_H-elongata_contig114400.1148.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114400 1080..1862 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114400.1148.1 ID=prot_H-elongata_contig114400.1148.1|Name=mRNA_H-elongata_contig114400.1148.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
MSCTARMMSDTTTIAEAPGVEKDPAGELTELARLEIRVGTILEITRHPDA
DSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSM
KGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNR
AGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLLGPIS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold