prot_H-elongata_contig11435.1147.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11435.1147.1
Unique Nameprot_H-elongata_contig11435.1147.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
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BLAST of mRNA_H-elongata_contig11435.1147.1 vs. uniprot
Match: A0A6H5KJL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL7_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 9.370e-44
Identity = 73/107 (68.22%), Postives = 91/107 (85.05%), Query Frame = 0 
Query:    1 IAAGVLDPLVETLGHESAKVRADALRLISCMAAGSSDQVDAVTSTVDLVPTVVAELEEGNALCRREAAWVFLNICECGFETHDDVIPEMVEHGVISAVCHNLDARAD 107
            I AGVLDPLVETLGH+S+KVR  ALRL+SC+AAGS++QVDAV ST D++P+V+ ELEEGNALC+REAAWVFLN+CEC  +    +IPE+V HGVI+AVC NL + +D
Sbjct:   36 IEAGVLDPLVETLGHDSSKVRGGALRLLSCIAAGSAEQVDAVVSTADIIPSVMVELEEGNALCKREAAWVFLNMCECSGDPRATIIPEIVGHGVIAAVCENLSSDSD 142
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BLAST of mRNA_H-elongata_contig11435.1147.1 vs. uniprot
Match: D7G3N3_ECTSI (Importin alpha-7 subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N3_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 1.630e-16
Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 0 
Query:   53 VAELEEGNALCRREAAWVFLNICECGFETHDDVIPEMVEHGVISAVCHNLDARAD 107
            + ELEEGNALC+REAAWVFLN+CEC  +  + +IPE+V HGVI+AVC NL + +D
Sbjct:    1 MVELEEGNALCKREAAWVFLNMCECSGDPGETIIPEIVGHGVIAAVCENLSSDSD 55
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11435.1147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJL7_9PHAE9.370e-4468.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3N3_ECTSI1.630e-1663.64Importin alpha-7 subunit, putative n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..108
e-value: 5.4E-19
score: 69.9
NoneNo IPR availablePANTHERPTHR23316IMPORTIN ALPHAcoord: 4..105
NoneNo IPR availablePANTHERPTHR23316:SF28IMPORTIN SUBUNIT ALPHAcoord: 4..105
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 3..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11435contigH-elongata_contig11435:2920..3887 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11435.1147.1mRNA_H-elongata_contig11435.1147.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11435 2919..3887 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11435.1147.1 ID=prot_H-elongata_contig11435.1147.1|Name=mRNA_H-elongata_contig11435.1147.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
IAAGVLDPLVETLGHESAKVRADALRLISCMAAGSSDQVDAVTSTVDLVP
TVVAELEEGNALCRREAAWVFLNICECGFETHDDVIPEMVEHGVISAVCH
NLDARADV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold