prot_H-elongata_contig114191.1134.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114191.1134.1
Unique Nameprot_H-elongata_contig114191.1134.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length262
Homology
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: UPI001A1815EF (Uncharacterized protein n=1 Tax=Streptomyces albiflaviniger TaxID=114683 RepID=UPI001A1815EF)

HSP 1 Score: 173 bits (438), Expect = 3.740e-49
Identity = 101/289 (34.95%), Postives = 154/289 (53.29%), Query Frame = 0
Query:    9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAY--PK---------------------------------GFQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTSI-ILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEIS 261
            VW +V+ P  +  +G + VFK+K D DG +  YK RLVA+GFRQ+ G+ Y+E+ SP     S+R++L++ A F +E WQ+DV  A+L  NVE+E+Y+  PE +  PK                                 GF ++  + C+++ +  G+ +  +V+YVDD+L+              L  CF +KDLGEASY LG  I R+R+   +   Q  Y+  V +RF + +     L    GK LSK+  P T  E E+MR IPY S +G++M+A   TR ++S
Sbjct:    5 VWTLVDLPNDRKAVGCKWVFKKKTDADGNVTVYKARLVAKGFRQIQGVDYDETYSPVAMLKSVRILLAIAAFFDYEIWQMDVKTAFLNGNVEEELYMMQPEGFVDPKDAGKVCKLQRSIYGLKQASRSWNLRFDEVIKEVGFVQTYGEACIYKKV-SGSSIAFLVLYVDDILIIGNDIELLNSVKSYLNKCFSMKDLGEASYILGIKIYRDRSRRLIALSQSTYLDKVLKRFRMDQAKKGFLPMLQGKTLSKTQCPATADEREKMRVIPYASAIGSIMYAMLCTRPDVS 292          
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A5N6PN55_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PN55_9ASTR)

HSP 1 Score: 175 bits (444), Expect = 5.140e-49
Identity = 99/290 (34.14%), Postives = 166/290 (57.24%), Query Frame = 0
Query:    9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAY-PKG----------------------------------FQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTS-IILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
            VW ++E P+G   +  + V+K K+D +G IE+YK RLVA+G+ Q  GI Y+E+ SP   + S+R+V++++A F  E  Q+DV  A+L  ++ ++++++ PE + PKG                                  F ++Q D C++   + G+  V++V+YV+D+L+AS        + R L + F +KDLGEASY +G  I RNR++GTL   Q  YI+ + +RF + + S  I     G +      P+++AE+++MR IPY S+VG+LM+A   TR +I++
Sbjct:    6 VWTLIELPRGAKAVSCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKYSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSICGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYLK-MSGSKFVILVLYVNDILLASNNLGMLYDSKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSIAPVVKGDSFGSFQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAY 294          
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A5N6M1Y8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M1Y8_9ASTR)

HSP 1 Score: 176 bits (447), Expect = 6.690e-48
Identity = 101/290 (34.83%), Postives = 165/290 (56.90%), Query Frame = 0
Query:    9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAY-PKG----------------------------------FQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTS-IILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
            VW + E P G   +G + V+K K+D +G IE+YK RLVA+G+ Q  GI Y+E+ SP   + S+R+V++++A F  E  Q+DV  A+L  ++ ++++++ PE + PKG                                  F ++Q D C++  I  G+  V++V+YVDD+L+AS       ++ R L + F +KDLGEASY +G  I RNR++GTL   Q  YI+ + +RF + + S  +     G        P+++AE+++MR IPY S+VG+LM+A   TR +I++
Sbjct:  141 VWTLTELPTGAKPVGCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSIYGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYLKI-SGSKFVILVLYVDDILLASNNLDMLYESKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSVAPVVKGDNFGSYQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAY 429          
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A396GW39_MEDTR (Putative RNA-directed DNA polymerase n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A396GW39_MEDTR)

HSP 1 Score: 179 bits (454), Expect = 1.410e-47
Identity = 101/290 (34.83%), Postives = 163/290 (56.21%), Query Frame = 0
Query:    9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAY--PK---------------------------------GFQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTSI-ILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
            VW +++ P+G   +G + VFK+KID DG++  YK RLVA+GF+Q++G+ Y+E+ SP     SIR++L++ A   +E WQ+DV  A+L  N+ +++Y+  PE +  PK                                 GF +++ +PCV++ +  G++V  +++YVDD+L+        ++    L  CF +KDLGEASY LG  I R+R+   L   Q  YI  V  RF + ++    +  + G  LSK+ SP TD E + MR IPY S +G++M+A   TR ++S+
Sbjct:  798 VWNLIDAPEGINPIGCKWVFKKKIDMDGKVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDEPCVYKKV-SGSIVSFLILYVDDILLIGNDIPTLQEIKTWLGKCFSMKDLGEASYILGIRIYRDRSQRLLGLSQGTYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDIPYASAIGSIMYAMICTRPDVSY 1086          
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A5N6MC51_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MC51_9ASTR)

HSP 1 Score: 176 bits (447), Expect = 1.070e-46
Identity = 101/290 (34.83%), Postives = 165/290 (56.90%), Query Frame = 0
Query:    9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAY-PKG----------------------------------FQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTS-IILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
            VW + E P G   +G + V+K K+D +G IE+YK RLVA+G+ Q  GI Y+E+ SP   + S+R+V++++A F  E  Q+DV  A+L  ++ ++++++ PE + PKG                                  F ++Q D C++  I  G+  V++V+YVDD+L+AS       ++ R L + F +KDLGEASY +G  I RNR++GTL   Q  YI+ + +RF + + S  +     G        P+++AE+++MR IPY S+VG+LM+A   TR +I++
Sbjct:  224 VWTLTELPTGAKPVGCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSIYGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYLKI-SGSKFVILVLYVDDILLASNNLDMLYESKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSVAPVVKGDNFGSYQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAY 512          
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A2P6S2B9_ROSCH (Putative RNA-directed DNA polymerase n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S2B9_ROSCH)

HSP 1 Score: 172 bits (435), Expect = 1.710e-46
Identity = 103/290 (35.52%), Postives = 157/290 (54.14%), Query Frame = 0
Query:    9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAYPK-----------------------------------GFQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTS-IILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
            VW++VE P+G   +G + VFK K D +G IE+YK RLVA+GF Q  GI Y+E+ SP   + S+R++++++A F  E  Q+DV  A+L  N+E+E+++  PE +                                     GF+ +  D C++  +  G+  + +++YVDD+L+AS+      +    L   F +KD+GEASY +G  I R+R+ G L   Q  YI+ V ERFG+ K S  I     G   S    PQ + E + M +IPY S VG+L++A T TR +ISF
Sbjct:   48 VWELVELPEGCKRVGCKWVFKTKRDSNGNIERYKARLVAKGFTQKEGIDYKETFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLEEEVFMNQPEGFSSKGKEHMVCKLKKSIYGLKQASRQWYLKFNDTVVSFGFKENIVDRCIYLKV-SGSKFIFLILYVDDILLASSDLGLLHETKNFLSKKFEMKDMGEASYVIGIEIFRDRSRGLLGLSQKAYIERVLERFGMEKCSPSIAPIQKGDKFSLKQCPQNELERKGMERIPYASAVGSLVYAQTCTRPDISF 336          
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A438C502_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438C502_VITVI)

HSP 1 Score: 167 bits (423), Expect = 1.850e-46
Identity = 100/264 (37.88%), Postives = 147/264 (55.68%), Query Frame = 0
Query:    9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAYPKGFQRSQADPCVFRWILHG---------AVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTSIILSA-AGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
            VW +VE P G   +G + VFK K D  G IE+YK RLVA+GF Q  GI Y E+ SP   + S+R++L+++A F  E  Q+DV   +L   +E+E+Y++ PE +P      +   C  +  ++G         + V  +V+YVDD+L+A+  K    +  + L   F +KD+GEASY +G  I R+R  G L   Q  YI  V ERF +   S  +S    G   +    P+ D E E+M+ IPY S VG+LM+A   TR +I+F
Sbjct:   25 VWDLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTTFLNGELEEEVYMKQPEGFPSS--DGEQLVCKLKKSIYGLKQASRQCGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERFRMKNCSPSVSPIVKGDRFNLDQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAF 286          
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A438G5R6_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438G5R6_VITVI)

HSP 1 Score: 166 bits (420), Expect = 2.130e-46
Identity = 103/290 (35.52%), Postives = 151/290 (52.07%), Query Frame = 0
Query:    9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAYPKG-----------------------------------FQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTSIILSA-AGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
            VW +VE P G   +G + VFK K D  G IE+YK RLVA+GF Q  GI Y E+ SP   + S+R++L+++A F  E  Q+DV  A+L   +E+E+Y++ PE +P                                     F  +  D C++  +  G+ V  +V+YVDD+L+A+  K    +  + L   F +KD+GEASY +G  I R+R  G L   Q  YI  V ERF +   S  +S    G   + +  P+ D E E+M+ IPY S VG+LM+A   TR +I+F
Sbjct:   13 VWDLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPISKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNIISSFSFVENVMDQCIYLKV-SGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERFWMKNCSPSVSPIVKGDRFNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRLDIAF 301          
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A438JRI4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JRI4_VITVI)

HSP 1 Score: 165 bits (417), Expect = 6.460e-46
Identity = 99/294 (33.67%), Postives = 156/294 (53.06%), Query Frame = 0
Query:    5 TARGVWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAYPK-----------------------------------GFQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTK-TSIILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
            T  GVW ++E P     +  + VFK K D  G IE++K RLVA+GF Q   I Y ++ SP   + S+R++++++A F  E  Q+DV  A+L  N++++IY+E PE + K                                   GF+ +  D C++  +  G+  + +++YVDD+L+AS+      +    L   F + D+GEA+Y +G  I R+R+ G L   Q + I  V ERF +   +S I     G  LSK   P+ + E E+M++IPY S+VG+LM+A T TR +ISF
Sbjct:    2 THNGVWDLIELPNSCKPVNCKWVFKTKRDAKGNIERFKARLVAKGFTQKESIDYRDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSFGFKENIVDQCIYLKV-SGSKFIFLILYVDDILLASSDLGLLHETKEHLSKNFHMVDMGEANYAIGIKIFRDRSRGVLGLSQKECIDRVLERFNMQSYSSGIAPILKGDKLSKMQCPRNNMEREQMKKIPYASVVGSLMYAQTCTRPDISF 294          
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A6N2NA87_SALVM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2NA87_SALVM)

HSP 1 Score: 172 bits (436), Expect = 2.700e-45
Identity = 98/266 (36.84%), Postives = 151/266 (56.77%), Query Frame = 0
Query:    9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAYPK----------GFQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVA--ERFGVTKTSIILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
            VW +++ P G   +G++ +FK K D DG I  YK RLVA+GFRQ++GI Y+E+ SP     SIR++L++ A + +E WQ+DV  A+L   +E+++Y+  PE +             F R + DPCV++    G+ V  +V+YVDD+L+        E     L  CF +KDLG+A Y LG  I R+R+   L   Q  YI  +    R  + K    L    G  LSK   P+T  E+E+M+Q+PY S +G++M+A   TR ++++
Sbjct:  425 VWDLIDLPDGVKPIGSKWIFKLKTDTDGNISVYKARLVAKGFRQIHGIDYDETFSPVVMIRSIRIILAIDAYYDYEIWQMDVKTAFLNGFLEEDVYMTQPEGFEDPNEAGKIKEFDFIRCEEDPCVYKKF-SGSKVAFLVLYVDDILLIGNDIPMLESVKEWLKKCFSMKDLGKAEYILGIKIYRDRSKRLLGLSQGTYIDKILIDSRCRIPKKGF-LPIQHGIYLSKKQCPKTPVELEKMKQVPYASAIGSIMYAMVCTRPDVAY 688          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001A1815EF3.740e-4934.95Uncharacterized protein n=1 Tax=Streptomyces albif... [more]
A0A5N6PN55_9ASTR5.140e-4934.14Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N6M1Y8_9ASTR6.690e-4834.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A396GW39_MEDTR1.410e-4734.83Putative RNA-directed DNA polymerase n=2 Tax=Medic... [more]
A0A5N6MC51_9ASTR1.070e-4634.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P6S2B9_ROSCH1.710e-4635.52Putative RNA-directed DNA polymerase n=2 Tax=Rosa ... [more]
A0A438C502_VITVI1.850e-4637.88Retrovirus-related Pol polyprotein from transposon... [more]
A0A438G5R6_VITVI2.130e-4635.52Retrovirus-related Pol polyprotein from transposon... [more]
A0A438JRI4_VITVI6.460e-4633.67Retrovirus-related Pol polyprotein from transposon... [more]
A0A6N2NA87_SALVM2.700e-4536.84Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..110
e-value: 3.2E-26
score: 92.4
coord: 114..210
e-value: 2.6E-11
score: 43.6
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 10..111
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 10..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..146
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..262
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 9..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114191contigH-elongata_contig114191:183..1067 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114191.1134.1mRNA_H-elongata_contig114191.1134.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114191 162..1067 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114191.1134.1 ID=prot_H-elongata_contig114191.1134.1|Name=mRNA_H-elongata_contig114191.1134.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=262bp
MVGKTARGVWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGF
RQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVE
KEIYVELPEAYPKGFQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASAT
KRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQT
VAERFGVTKTSIILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALM
WAATMTRAEISF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like